NPTX1 32931

Name: NPTX1	Sequence: fasta or formatted (432aa)		NCBI GI: 55770878
Description: neuronal pentraxin I precursor		Referenced in: Neurons
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.6 37 2 C cysteine 2.1 9 1 D aspartate 3.9 17 1 E glutamate 7.4 32 2 F phenylalanine 2.5 11 1 G glycine 9.5 41 3 H histidine 1.4 6 2 I isoleucine 3.9 17 1 K lysine 5.6 24 2 L leucine 10.6 46 2 M methionine 1.6 7 1 N asparagine 4.2 18 2 P proline 4.4 19 1 Q glutamine 5.8 25 2 R arginine 5.1 22 1 S serine 6.5 28 3 T threonine 7.9 34 2 V valine 5.1 22 1 W tryptophan 1.9 8 1 Y tyrosine 2.1 9 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 neuronal pentraxin I precursor NPTX2 0.524 neuronal pentraxin II NPTXR 0.407 neuronal pentraxin receptor SVEP1 0.144 polydom GPR144 0.105 G protein-coupled receptor 144 C16orf38 0.099 hypothetical protein LOC390667 PTX3 0.090 pentraxin 3 CRP 0.068 C-reactive protein, pentraxin-related APCS 0.057 serum amyloid P component precursor LOC649458 0.031 PREDICTED: similar to hCG2036669 LOC649458 0.031 PREDICTED: similar to hCG2036669 LOC649458 0.031 PREDICTED: hypothetical protein LOC649458 GPR112 0.018 G-protein coupled receptor 112 MYH14 0.017 myosin, heavy chain 14 isoform 1 MYH14 0.017 myosin, heavy chain 14 isoform 2 MYH14 0.017 myosin, heavy chain 14 isoform 3 LOC100133220 0.017 PREDICTED: hypothetical protein CNTLN 0.017 centlein isoform 1 RALY 0.017 RNA binding protein (autoantigenic, hnRNP-associated ... RALY 0.017 RNA binding protein (autoantigenic, hnRNP-associated... GPR133 0.015 G protein-coupled receptor 133 ANKRD24 0.015 ankyrin repeat domain 24 HOOK2 0.015 hook homolog 2 isoform 2 CIT 0.014 citron LOC728636 0.014 PREDICTED: similar to golgi autoantigen, golgin sub... GOLGA6B 0.014 golgi autoantigen, golgin subfamily a, 6B CCDC64B 0.014 coiled-coil domain containing 64B LOC440295 0.014 hypothetical protein LOC440295 MYH7 0.014 myosin, heavy chain 7, cardiac muscle, beta LOC647042 0.014 PREDICTED: hypothetical protein isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.