Guide to the Human Genome
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Name: TIMM44 Sequence: fasta or formatted (452aa) NCBI GI: 33636719
Description:

translocase of inner mitochondrial membrane 44

Referenced in:

Mitochondria

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9         31           4
 C cysteine            1.3          6           1
 D aspartate           6.0         27           2
 E glutamate           9.3         42           2
 F phenylalanine       3.8         17           2
 G glycine             6.4         29           2
 H histidine           1.3          6           1
 I isoleucine          4.0         18           2
 K lysine              9.1         41           2
 L leucine            10.4         47           2
 M methionine          2.7         12           2
 N asparagine          3.1         14           2
 P proline             3.1         14           1
 Q glutamine           4.4         20           2
 R arginine            7.1         32           2
 S serine              7.5         34           2
 T threonine           3.8         17           1
 V valine              6.4         29           2
 W tryptophan          1.3          6           1
 Y tyrosine            2.2         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   translocase of inner mitochondrial membrane 44 [Homo... 
MYH1                  0.025   myosin, heavy chain 1, skeletal muscle, adult [Homo...
CCDC88C               0.022   DVL-binding protein DAPLE 
MTUS1                 0.020   mitochondrial tumor suppressor 1 isoform 5 
MTUS1                 0.020   mitochondrial tumor suppressor 1 isoform 1 
MTUS1                 0.020   mitochondrial tumor suppressor 1 isoform 2 
MTUS1                 0.020   mitochondrial tumor suppressor 1 isoform 4 
PLEC1                 0.017   plectin 1 isoform 11 
PLEC1                 0.017   plectin 1 isoform 10 
PLEC1                 0.017   plectin 1 isoform 8 
PLEC1                 0.017   plectin 1 isoform 7 
PLEC1                 0.017   plectin 1 isoform 6 
PLEC1                 0.017   plectin 1 isoform 3 
PLEC1                 0.017   plectin 1 isoform 2 
PLEC1                 0.017   plectin 1 isoform 1 
CENPE                 0.017   centromere protein E 
LOC645202             0.016   PREDICTED: hypothetical protein LOC645202 
TMF1                  0.016   TATA element modulatory factor 1 
NEXN                  0.016   nexilin (F actin binding protein) 
GOLGA4                0.015   golgi autoantigen, golgin subfamily a, 4 
CGNL1                 0.015   cingulin-like 1 
ZNF318                0.015   zinc finger protein 318 
ERC1                  0.014   RAB6-interacting protein 2 isoform epsilon 
ERC1                  0.014   RAB6-interacting protein 2 isoform delta 
KTN1                  0.014   kinectin 1 isoform a 
KTN1                  0.014   kinectin 1 isoform a 
CGN                   0.014   cingulin 
TPD52L2               0.014   tumor protein D52-like 2 isoform f 
ESCO1                 0.013   establishment of cohesion 1 homolog 1 
TXLNB                 0.011   taxilin beta 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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