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Search of human proteins with 40353740
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|40353740 c-Mpl binding protein isoform b [Homo sapiens]
(730 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|40353740 c-Mpl binding protein isoform b [Homo sapiens] 1477 0.0
gi|40353738 c-Mpl binding protein isoform a [Homo sapiens] 1458 0.0
gi|40353736 c-Mpl binding protein isoform c [Homo sapiens] 778 0.0
gi|57634536 La ribonucleoprotein domain family, member 4B [Homo ... 420 e-117
gi|61102725 la related protein isoform 2 [Homo sapiens] 74 6e-13
gi|39725634 la related protein isoform 1 [Homo sapiens] 74 6e-13
gi|30061565 La ribonucleoprotein domain family member 2 isoform ... 69 2e-11
gi|30061569 La ribonucleoprotein domain family member 2 isoform ... 69 2e-11
gi|30061567 La ribonucleoprotein domain family member 2 isoform ... 69 2e-11
gi|109809739 La ribonucleoprotein domain family, member 7 [Homo ... 54 4e-07
gi|109809741 La ribonucleoprotein domain family, member 7 [Homo ... 54 4e-07
gi|239753842 PREDICTED: similar to hCG2040199 [Homo sapiens] 54 7e-07
gi|169166778 PREDICTED: similar to hCG2040199 [Homo sapiens] 54 7e-07
gi|169166363 PREDICTED: similar to hCG2040199 [Homo sapiens] 54 7e-07
gi|37537710 La ribonucleoprotein domain family, member 6 isoform... 45 2e-04
gi|21536423 amphiphysin isoform 2 [Homo sapiens] 45 2e-04
gi|4502081 amphiphysin isoform 1 [Homo sapiens] 45 2e-04
gi|218083800 Rho GTPase-activating protein isoform 1 [Homo sapiens] 45 2e-04
gi|29469071 Rho GTPase-activating protein isoform 2 [Homo sapiens] 45 2e-04
gi|10835067 autoantigen La [Homo sapiens] 40 0.006
gi|34335264 zinc finger, MYND-type containing 8 isoform c [Homo ... 40 0.006
gi|34335262 zinc finger, MYND-type containing 8 isoform a [Homo ... 40 0.006
gi|34335266 zinc finger, MYND-type containing 8 isoform b [Homo ... 40 0.006
gi|47578107 delangin isoform B [Homo sapiens] 37 0.065
gi|47578105 delangin isoform A [Homo sapiens] 37 0.065
gi|149944526 additional sex combs like 3 [Homo sapiens] 37 0.085
gi|4758216 dishevelled 2 [Homo sapiens] 36 0.14
gi|112382212 SEC24 (S. cerevisiae) homolog B isoform a [Homo sap... 36 0.14
gi|87162461 fragile X mental retardation 2 [Homo sapiens] 35 0.19
gi|112382214 SEC24 (S. cerevisiae) homolog B isoform b [Homo sap... 35 0.19
>gi|40353740 c-Mpl binding protein isoform b [Homo sapiens]
Length = 730
Score = 1477 bits (3824), Expect = 0.0
Identities = 730/730 (100%), Positives = 730/730 (100%)
Query: 1 MLLFVEQVASKGTGLNPNAKVWQEIAPGNTDATPVTHGTESSWHEIAATSGAHPEVSVFN 60
MLLFVEQVASKGTGLNPNAKVWQEIAPGNTDATPVTHGTESSWHEIAATSGAHPEVSVFN
Sbjct: 1 MLLFVEQVASKGTGLNPNAKVWQEIAPGNTDATPVTHGTESSWHEIAATSGAHPEVSVFN 60
Query: 61 TGNAELSEDICKEYEVMYSSSCETTRNTTGIEESTDGMILGPEDLSYQIYDVSGESNSAV 120
TGNAELSEDICKEYEVMYSSSCETTRNTTGIEESTDGMILGPEDLSYQIYDVSGESNSAV
Sbjct: 61 TGNAELSEDICKEYEVMYSSSCETTRNTTGIEESTDGMILGPEDLSYQIYDVSGESNSAV 120
Query: 121 STEDLKECLKKQLEFCFSRENLSKDLYLISQMDSDQFIPIWTVANMEEIKKLTTDPDLIL 180
STEDLKECLKKQLEFCFSRENLSKDLYLISQMDSDQFIPIWTVANMEEIKKLTTDPDLIL
Sbjct: 121 STEDLKECLKKQLEFCFSRENLSKDLYLISQMDSDQFIPIWTVANMEEIKKLTTDPDLIL 180
Query: 181 EVLRSSPMVQVDEKGEKVRPSHKRCIVILREIPETTPIEEVKGLFKSENCPKVISCEFAH 240
EVLRSSPMVQVDEKGEKVRPSHKRCIVILREIPETTPIEEVKGLFKSENCPKVISCEFAH
Sbjct: 181 EVLRSSPMVQVDEKGEKVRPSHKRCIVILREIPETTPIEEVKGLFKSENCPKVISCEFAH 240
Query: 241 NSNWYITFQSDTDAQQAFKYLREEVKTFQGKPIMARIKAINTFFAKNGYRLMDSSIYSHP 300
NSNWYITFQSDTDAQQAFKYLREEVKTFQGKPIMARIKAINTFFAKNGYRLMDSSIYSHP
Sbjct: 241 NSNWYITFQSDTDAQQAFKYLREEVKTFQGKPIMARIKAINTFFAKNGYRLMDSSIYSHP 300
Query: 301 IQTQAQYASPVFMQPVYNPHQQYSVYSIVPQSWSPNPTPYFETPLAPFPNGSFVNGFNSP 360
IQTQAQYASPVFMQPVYNPHQQYSVYSIVPQSWSPNPTPYFETPLAPFPNGSFVNGFNSP
Sbjct: 301 IQTQAQYASPVFMQPVYNPHQQYSVYSIVPQSWSPNPTPYFETPLAPFPNGSFVNGFNSP 360
Query: 361 GSYKTNAAAMNMGRPFQKNRVKPQFRSSGGSEHSTEGSVSLGDGQLNRYSSRNFPAERHN 420
GSYKTNAAAMNMGRPFQKNRVKPQFRSSGGSEHSTEGSVSLGDGQLNRYSSRNFPAERHN
Sbjct: 361 GSYKTNAAAMNMGRPFQKNRVKPQFRSSGGSEHSTEGSVSLGDGQLNRYSSRNFPAERHN 420
Query: 421 PTVTGHQEQTYLQKETSTLQVEQNGDYGRGRRTLFRGRRRREDDRISRPHPSTAESKAPT 480
PTVTGHQEQTYLQKETSTLQVEQNGDYGRGRRTLFRGRRRREDDRISRPHPSTAESKAPT
Sbjct: 421 PTVTGHQEQTYLQKETSTLQVEQNGDYGRGRRTLFRGRRRREDDRISRPHPSTAESKAPT 480
Query: 481 PKFDLLASNFPPLPGSSSRMPGELVLENRMSDVVKGVYKEKDNEELTISCPVPADEQTEC 540
PKFDLLASNFPPLPGSSSRMPGELVLENRMSDVVKGVYKEKDNEELTISCPVPADEQTEC
Sbjct: 481 PKFDLLASNFPPLPGSSSRMPGELVLENRMSDVVKGVYKEKDNEELTISCPVPADEQTEC 540
Query: 541 TSAQQLNMSTSSPCAAELTALSTTQQEKDLIEDSSVQKDGLNQTTIPVSPPSTTKPSRAS 600
TSAQQLNMSTSSPCAAELTALSTTQQEKDLIEDSSVQKDGLNQTTIPVSPPSTTKPSRAS
Sbjct: 541 TSAQQLNMSTSSPCAAELTALSTTQQEKDLIEDSSVQKDGLNQTTIPVSPPSTTKPSRAS 600
Query: 601 TASPCNNNINAATAVALQEPRKLSYAEVCQKPPKEPSSVLVQPLRELRSNVVSPTKNEDN 660
TASPCNNNINAATAVALQEPRKLSYAEVCQKPPKEPSSVLVQPLRELRSNVVSPTKNEDN
Sbjct: 601 TASPCNNNINAATAVALQEPRKLSYAEVCQKPPKEPSSVLVQPLRELRSNVVSPTKNEDN 660
Query: 661 GAPENSVEKPHEKPEARASKDYSGFRGNIIPRGAAGKIREQRRQFSHRAIPQGVTRRNGK 720
GAPENSVEKPHEKPEARASKDYSGFRGNIIPRGAAGKIREQRRQFSHRAIPQGVTRRNGK
Sbjct: 661 GAPENSVEKPHEKPEARASKDYSGFRGNIIPRGAAGKIREQRRQFSHRAIPQGVTRRNGK 720
Query: 721 EQYVPPRSPK 730
EQYVPPRSPK
Sbjct: 721 EQYVPPRSPK 730
>gi|40353738 c-Mpl binding protein isoform a [Homo sapiens]
Length = 724
Score = 1458 bits (3774), Expect = 0.0
Identities = 723/730 (99%), Positives = 723/730 (99%), Gaps = 6/730 (0%)
Query: 1 MLLFVEQVASKGTGLNPNAKVWQEIAPGNTDATPVTHGTESSWHEIAATSGAHPEVSVFN 60
MLLFVEQVASKGTGLNPNAKVWQEIAPGNTDATPVTHGTESSWHEIAATSGAHPE
Sbjct: 1 MLLFVEQVASKGTGLNPNAKVWQEIAPGNTDATPVTHGTESSWHEIAATSGAHPE----- 55
Query: 61 TGNAELSEDICKEYEVMYSSSCETTRNTTGIEESTDGMILGPEDLSYQIYDVSGESNSAV 120
GNAELSEDICKEYEVMYSSSCETTRNTTGIEESTDGMILGPEDLSYQIYDVSGESNSAV
Sbjct: 56 -GNAELSEDICKEYEVMYSSSCETTRNTTGIEESTDGMILGPEDLSYQIYDVSGESNSAV 114
Query: 121 STEDLKECLKKQLEFCFSRENLSKDLYLISQMDSDQFIPIWTVANMEEIKKLTTDPDLIL 180
STEDLKECLKKQLEFCFSRENLSKDLYLISQMDSDQFIPIWTVANMEEIKKLTTDPDLIL
Sbjct: 115 STEDLKECLKKQLEFCFSRENLSKDLYLISQMDSDQFIPIWTVANMEEIKKLTTDPDLIL 174
Query: 181 EVLRSSPMVQVDEKGEKVRPSHKRCIVILREIPETTPIEEVKGLFKSENCPKVISCEFAH 240
EVLRSSPMVQVDEKGEKVRPSHKRCIVILREIPETTPIEEVKGLFKSENCPKVISCEFAH
Sbjct: 175 EVLRSSPMVQVDEKGEKVRPSHKRCIVILREIPETTPIEEVKGLFKSENCPKVISCEFAH 234
Query: 241 NSNWYITFQSDTDAQQAFKYLREEVKTFQGKPIMARIKAINTFFAKNGYRLMDSSIYSHP 300
NSNWYITFQSDTDAQQAFKYLREEVKTFQGKPIM RIKAINTFFAKNGYRLMDSSIYSHP
Sbjct: 235 NSNWYITFQSDTDAQQAFKYLREEVKTFQGKPIMVRIKAINTFFAKNGYRLMDSSIYSHP 294
Query: 301 IQTQAQYASPVFMQPVYNPHQQYSVYSIVPQSWSPNPTPYFETPLAPFPNGSFVNGFNSP 360
IQTQAQYASPVFMQPVYNPHQQYSVYSIVPQSWSPNPTPYFETPLAPFPNGSFVNGFNSP
Sbjct: 295 IQTQAQYASPVFMQPVYNPHQQYSVYSIVPQSWSPNPTPYFETPLAPFPNGSFVNGFNSP 354
Query: 361 GSYKTNAAAMNMGRPFQKNRVKPQFRSSGGSEHSTEGSVSLGDGQLNRYSSRNFPAERHN 420
GSYKTNAAAMNMGRPFQKNRVKPQFRSSGGSEHSTEGSVSLGDGQLNRYSSRNFPAERHN
Sbjct: 355 GSYKTNAAAMNMGRPFQKNRVKPQFRSSGGSEHSTEGSVSLGDGQLNRYSSRNFPAERHN 414
Query: 421 PTVTGHQEQTYLQKETSTLQVEQNGDYGRGRRTLFRGRRRREDDRISRPHPSTAESKAPT 480
PTVTGHQEQTYLQKETSTLQVEQNGDYGRGRRTLFRGRRRREDDRISRPHPSTAESKAPT
Sbjct: 415 PTVTGHQEQTYLQKETSTLQVEQNGDYGRGRRTLFRGRRRREDDRISRPHPSTAESKAPT 474
Query: 481 PKFDLLASNFPPLPGSSSRMPGELVLENRMSDVVKGVYKEKDNEELTISCPVPADEQTEC 540
PKFDLLASNFPPLPGSSSRMPGELVLENRMSDVVKGVYKEKDNEELTISCPVPADEQTEC
Sbjct: 475 PKFDLLASNFPPLPGSSSRMPGELVLENRMSDVVKGVYKEKDNEELTISCPVPADEQTEC 534
Query: 541 TSAQQLNMSTSSPCAAELTALSTTQQEKDLIEDSSVQKDGLNQTTIPVSPPSTTKPSRAS 600
TSAQQLNMSTSSPCAAELTALSTTQQEKDLIEDSSVQKDGLNQTTIPVSPPSTTKPSRAS
Sbjct: 535 TSAQQLNMSTSSPCAAELTALSTTQQEKDLIEDSSVQKDGLNQTTIPVSPPSTTKPSRAS 594
Query: 601 TASPCNNNINAATAVALQEPRKLSYAEVCQKPPKEPSSVLVQPLRELRSNVVSPTKNEDN 660
TASPCNNNINAATAVALQEPRKLSYAEVCQKPPKEPSSVLVQPLRELRSNVVSPTKNEDN
Sbjct: 595 TASPCNNNINAATAVALQEPRKLSYAEVCQKPPKEPSSVLVQPLRELRSNVVSPTKNEDN 654
Query: 661 GAPENSVEKPHEKPEARASKDYSGFRGNIIPRGAAGKIREQRRQFSHRAIPQGVTRRNGK 720
GAPENSVEKPHEKPEARASKDYSGFRGNIIPRGAAGKIREQRRQFSHRAIPQGVTRRNGK
Sbjct: 655 GAPENSVEKPHEKPEARASKDYSGFRGNIIPRGAAGKIREQRRQFSHRAIPQGVTRRNGK 714
Query: 721 EQYVPPRSPK 730
EQYVPPRSPK
Sbjct: 715 EQYVPPRSPK 724
>gi|40353736 c-Mpl binding protein isoform c [Homo sapiens]
Length = 653
Score = 778 bits (2009), Expect = 0.0
Identities = 385/386 (99%), Positives = 386/386 (100%)
Query: 345 LAPFPNGSFVNGFNSPGSYKTNAAAMNMGRPFQKNRVKPQFRSSGGSEHSTEGSVSLGDG 404
+APFPNGSFVNGFNSPGSYKTNAAAMNMGRPFQKNRVKPQFRSSGGSEHSTEGSVSLGDG
Sbjct: 268 MAPFPNGSFVNGFNSPGSYKTNAAAMNMGRPFQKNRVKPQFRSSGGSEHSTEGSVSLGDG 327
Query: 405 QLNRYSSRNFPAERHNPTVTGHQEQTYLQKETSTLQVEQNGDYGRGRRTLFRGRRRREDD 464
QLNRYSSRNFPAERHNPTVTGHQEQTYLQKETSTLQVEQNGDYGRGRRTLFRGRRRREDD
Sbjct: 328 QLNRYSSRNFPAERHNPTVTGHQEQTYLQKETSTLQVEQNGDYGRGRRTLFRGRRRREDD 387
Query: 465 RISRPHPSTAESKAPTPKFDLLASNFPPLPGSSSRMPGELVLENRMSDVVKGVYKEKDNE 524
RISRPHPSTAESKAPTPKFDLLASNFPPLPGSSSRMPGELVLENRMSDVVKGVYKEKDNE
Sbjct: 388 RISRPHPSTAESKAPTPKFDLLASNFPPLPGSSSRMPGELVLENRMSDVVKGVYKEKDNE 447
Query: 525 ELTISCPVPADEQTECTSAQQLNMSTSSPCAAELTALSTTQQEKDLIEDSSVQKDGLNQT 584
ELTISCPVPADEQTECTSAQQLNMSTSSPCAAELTALSTTQQEKDLIEDSSVQKDGLNQT
Sbjct: 448 ELTISCPVPADEQTECTSAQQLNMSTSSPCAAELTALSTTQQEKDLIEDSSVQKDGLNQT 507
Query: 585 TIPVSPPSTTKPSRASTASPCNNNINAATAVALQEPRKLSYAEVCQKPPKEPSSVLVQPL 644
TIPVSPPSTTKPSRASTASPCNNNINAATAVALQEPRKLSYAEVCQKPPKEPSSVLVQPL
Sbjct: 508 TIPVSPPSTTKPSRASTASPCNNNINAATAVALQEPRKLSYAEVCQKPPKEPSSVLVQPL 567
Query: 645 RELRSNVVSPTKNEDNGAPENSVEKPHEKPEARASKDYSGFRGNIIPRGAAGKIREQRRQ 704
RELRSNVVSPTKNEDNGAPENSVEKPHEKPEARASKDYSGFRGNIIPRGAAGKIREQRRQ
Sbjct: 568 RELRSNVVSPTKNEDNGAPENSVEKPHEKPEARASKDYSGFRGNIIPRGAAGKIREQRRQ 627
Query: 705 FSHRAIPQGVTRRNGKEQYVPPRSPK 730
FSHRAIPQGVTRRNGKEQYVPPRSPK
Sbjct: 628 FSHRAIPQGVTRRNGKEQYVPPRSPK 653
Score = 540 bits (1391), Expect = e-153
Identities = 272/293 (92%), Positives = 275/293 (93%), Gaps = 9/293 (3%)
Query: 1 MLLFVEQVASKGTGLNPNAKVWQEIAPGNTDATPVTHGTESSWHEIAATSGAHPEVSVFN 60
MLLFVEQVASKGTGLNPNAKVWQEIAPGNTDATPVTHGTESSWHEIAATSGAHPE
Sbjct: 1 MLLFVEQVASKGTGLNPNAKVWQEIAPGNTDATPVTHGTESSWHEIAATSGAHPE----- 55
Query: 61 TGNAELSEDICKEYEVMYSSSCETTRNTTGIEESTDGMILGPEDLSYQIYDVSGESNSAV 120
GNAELSEDICKEYEVMYSSSCETTRNTTGIEESTDGMILGPEDLSYQIYDVSGESNSAV
Sbjct: 56 -GNAELSEDICKEYEVMYSSSCETTRNTTGIEESTDGMILGPEDLSYQIYDVSGESNSAV 114
Query: 121 STEDLKECLKKQLEFCFSRENLSKDLYLISQMDSDQFIPIWTVANMEEIKKLTTDPDLIL 180
STEDLKECLKKQLEFCFSRENLSKDLYLISQMDSDQFIPIWTVANMEEIKKLTTDPDLIL
Sbjct: 115 STEDLKECLKKQLEFCFSRENLSKDLYLISQMDSDQFIPIWTVANMEEIKKLTTDPDLIL 174
Query: 181 EVLRSSPMVQVDEKGEKVRPSHKRCIVILREIPETTPIEEVKGLFKSENCPKVISCEFAH 240
EVLRSSPMVQVDEKGEKVRPSHKRCIVILREIPETTPIEEVKGLFKSENCPKVISCEFAH
Sbjct: 175 EVLRSSPMVQVDEKGEKVRPSHKRCIVILREIPETTPIEEVKGLFKSENCPKVISCEFAH 234
Query: 241 NSNWYITFQSDTDAQQAFKYLREEVKTFQGKPIMARI---KAINTFFAKNGYR 290
NSNWYITFQSDTDAQQAFKYLREEVKTFQGKPIMA +N F + Y+
Sbjct: 235 NSNWYITFQSDTDAQQAFKYLREEVKTFQGKPIMAPFPNGSFVNGFNSPGSYK 287
>gi|57634536 La ribonucleoprotein domain family, member 4B [Homo
sapiens]
Length = 738
Score = 420 bits (1080), Expect = e-117
Identities = 283/750 (37%), Positives = 399/750 (53%), Gaps = 89/750 (11%)
Query: 9 ASKGTGLNPNAKVWQEIAPG-NTDATPVTHGTESSWHEIAATSGAHPEVSVFNTGNAELS 67
A+K + LNPNA+VW AP + +A+ G ++W E+A G+ +
Sbjct: 50 ATKVSELNPNAEVWG--APVLHLEASSAADGVSAAWEEVAGHHADRGPQGSDANGDGDQG 107
Query: 68 EDICKEYEVMYSSSCETTRNTTGIEESTDGMILGPEDLSY--QIYDVSGESNSAVSTEDL 125
+ + S + + + LGP + + + G + S ED
Sbjct: 108 HENAALPDPQESDPADM-----------NALALGPSEYDSLPENSETGGNESQPDSQEDP 156
Query: 126 KECLKKQLEFCFSRENLSKDLYLISQMDSDQFIPIWTVANMEEIKKLTTDPDLILEVLRS 185
+E LKK LEFC SRENL+ D+YLISQMDSDQ++PI TVAN++ IKKL+TD DLI+EVLRS
Sbjct: 157 REVLKKTLEFCLSRENLASDMYLISQMDSDQYVPITTVANLDHIKKLSTDVDLIVEVLRS 216
Query: 186 SPMVQVDEKGEKVRPSHKRCIVILREIPETTPIEEVKGLFKSENCPKVISCEFAHNSNWY 245
P+VQVDEKGEKVRP+ RCIVILREI E+TP+EEV+ LFK +N PK I+CEFA+N NW+
Sbjct: 217 LPLVQVDEKGEKVRPNQNRCIVILREISESTPVEEVEALFKGDNLPKFINCEFAYNDNWF 276
Query: 246 ITFQSDTDAQQAFKYLREEVKTFQGKPIMARIK----AINTFFAKNGYRLMDSSIYSHPI 301
ITF+++ DAQQA+KYLREEVKTFQGKPI ARIK AINTF KNG+R +D S+Y+
Sbjct: 277 ITFETEADAQQAYKYLREEVKTFQGKPIKARIKAKAIAINTFLPKNGFRPLDVSLYA--- 333
Query: 302 QTQAQYASPVFMQPVYNPHQQYSVYSIV-PQSWSPNPTPYFETPL-APFPNGSFVNGFNS 359
Q +YA+ + P+Y+P QQ+ +YS++ PQ+WS + Y + PL PFPN F+NGF S
Sbjct: 334 --QQRYATSFYFPPMYSPQQQFPLYSLITPQTWSATHS-YLDPPLVTPFPNTGFINGFTS 390
Query: 360 PGSYKTNAAAMNMGRPFQKNRVKPQFRSSGGSEHSTEGSVSLGDGQLNRYSSRNFPAER- 418
P ++K A+ + R + P S H+ S G G L S NF A+R
Sbjct: 391 P-AFKPAASPLTSLRQYPPRSRNP---SKSHLRHAIP-SAERGPGLLESPSIFNFTADRL 445
Query: 419 ----HNP-TVTGHQEQTYLQKETSTLQ------------VEQNGDYGRGRRTLFRGRRRR 461
+P T Q +T +Q ++ + +E + GRGR+ F R++R
Sbjct: 446 INGVRSPQTRQAGQTRTRIQNPSAYAKREAGPGRVEPGSLESSPGLGRGRKNSFGYRKKR 505
Query: 462 EDDRISRPHPSTAESKAPTPKFDLLASNFPPLPGSSSRMPGELVLENRMSDVVKGVYKEK 521
E+ S S K P+P F+L S+FPPLPG++ + E + ENR+S ++ G KE+
Sbjct: 506 EEKFTSSQTQSPTPPKPPSPSFELGLSSFPPLPGAAGNLKTEDLFENRLSSLIIGPSKER 565
Query: 522 DNEELTISCPVPADEQTECTSAQQLNMSTSSPCAAELTALSTTQQEKDLIEDSSVQKDGL 581
T+S + S + S + CA T + L +D V +
Sbjct: 566 -----TLSADASVNTLPVVVSREP---SVPASCAVSAT-YERSPSPAHLPDDPKVAEKQR 616
Query: 582 NQTTIPVSPPSTTKPSRASTASPCNN-NINAATAVALQEPRKLSYAEVCQKPPKEPSSVL 640
++ P A TA+ C + +N A E RK SYAE+CQ+ KEP S
Sbjct: 617 ETHSVDRLP-------SALTATACKSVQVNGAAT----ELRKPSYAEICQRTSKEPPSSP 665
Query: 641 VQPLRELRSNVVSPTKNEDNGAPENSVEKPHEKPEARASKDYSGFRGNIIPRGAAGKIRE 700
+QP +E + N V K E A E+ E P +++ G R+
Sbjct: 666 LQPQKEQKPNTVGCGKEEKKLA--EPAERYREPPALKST---------------PGAPRD 708
Query: 701 QRRQFSHRAIPQGVTRRNGKEQYVPPRSPK 730
QRR R P + +R +EQ PP+SP+
Sbjct: 709 QRRPAGGRPSPSAMGKRLSREQSTPPKSPQ 738
>gi|61102725 la related protein isoform 2 [Homo sapiens]
Length = 1096
Score = 73.6 bits (179), Expect = 6e-13
Identities = 44/136 (32%), Positives = 76/136 (55%), Gaps = 16/136 (11%)
Query: 104 DLSYQIYDVSGESNSAVSTEDLKECLKKQLEFCFSRENLSKDLYLISQMDSDQFIPIWTV 163
+++Y +VS +V E LK+ +K+Q+E+ FS +NL +D +L +MD+D F+PI +
Sbjct: 382 NITYYFDNVSSTELYSVDQELLKDYIKRQIEYYFSVDNLERDFFLRRKMDADGFLPITLI 441
Query: 164 ANMEEIKKLTTDPDLILEVLRSSPMVQVDEKGEKVRPSHKRCIVILREIPETTPIEEVKG 223
A+ ++ LTTD LI L+ S +V++ + EKVR RE PE P+ +
Sbjct: 442 ASFHRVQALTTDISLIFAALKDSKVVEIVD--EKVR---------RREEPEKWPLPPIVD 490
Query: 224 LFKSE-----NCPKVI 234
+++ NCP+ +
Sbjct: 491 YSQTDFSQLLNCPEFV 506
>gi|39725634 la related protein isoform 1 [Homo sapiens]
Length = 1019
Score = 73.6 bits (179), Expect = 6e-13
Identities = 44/136 (32%), Positives = 76/136 (55%), Gaps = 16/136 (11%)
Query: 104 DLSYQIYDVSGESNSAVSTEDLKECLKKQLEFCFSRENLSKDLYLISQMDSDQFIPIWTV 163
+++Y +VS +V E LK+ +K+Q+E+ FS +NL +D +L +MD+D F+PI +
Sbjct: 305 NITYYFDNVSSTELYSVDQELLKDYIKRQIEYYFSVDNLERDFFLRRKMDADGFLPITLI 364
Query: 164 ANMEEIKKLTTDPDLILEVLRSSPMVQVDEKGEKVRPSHKRCIVILREIPETTPIEEVKG 223
A+ ++ LTTD LI L+ S +V++ + EKVR RE PE P+ +
Sbjct: 365 ASFHRVQALTTDISLIFAALKDSKVVEIVD--EKVR---------RREEPEKWPLPPIVD 413
Query: 224 LFKSE-----NCPKVI 234
+++ NCP+ +
Sbjct: 414 YSQTDFSQLLNCPEFV 429
>gi|30061565 La ribonucleoprotein domain family member 2 isoform 2
[Homo sapiens]
Length = 522
Score = 68.6 bits (166), Expect = 2e-11
Identities = 48/137 (35%), Positives = 68/137 (49%), Gaps = 13/137 (9%)
Query: 62 GNAELSEDICKEYEVMYSSSCETTRNTTGIEESTDGMILGPEDLSYQIYDVSGESNSAVS 121
GN L+ D Y Y E T E +T M + Q+Y V
Sbjct: 164 GNPRLNFD----YSYGYQEHGERTDQPFQTELNTSMMYYYDDGTGVQVYPVEEAL----- 214
Query: 122 TEDLKECLKKQLEFCFSRENLSKDLYLISQMDSDQFIPIWTVANMEEIKKLTTDPDLILE 181
LKE +K+Q+E+ FS ENL +D +L +MD F+PI +A + ++ LTT+ +LILE
Sbjct: 215 ---LKEYIKRQIEYYFSVENLERDFFLRGKMDEQGFLPISLIAGFQRVQALTTNLNLILE 271
Query: 182 VLRSSPMVQ-VDEKGEK 197
L+ S V+ VDEK K
Sbjct: 272 ALKDSTEVEIVDEKMRK 288
>gi|30061569 La ribonucleoprotein domain family member 2 isoform 3
[Homo sapiens]
Length = 358
Score = 68.6 bits (166), Expect = 2e-11
Identities = 48/137 (35%), Positives = 68/137 (49%), Gaps = 13/137 (9%)
Query: 62 GNAELSEDICKEYEVMYSSSCETTRNTTGIEESTDGMILGPEDLSYQIYDVSGESNSAVS 121
GN L+ D Y Y E T E +T M + Q+Y V
Sbjct: 164 GNPRLNFD----YSYGYQEHGERTDQPFQTELNTSMMYYYDDGTGVQVYPVEEAL----- 214
Query: 122 TEDLKECLKKQLEFCFSRENLSKDLYLISQMDSDQFIPIWTVANMEEIKKLTTDPDLILE 181
LKE +K+Q+E+ FS ENL +D +L +MD F+PI +A + ++ LTT+ +LILE
Sbjct: 215 ---LKEYIKRQIEYYFSVENLERDFFLRGKMDEQGFLPISLIAGFQRVQALTTNLNLILE 271
Query: 182 VLRSSPMVQ-VDEKGEK 197
L+ S V+ VDEK K
Sbjct: 272 ALKDSTEVEIVDEKMRK 288
>gi|30061567 La ribonucleoprotein domain family member 2 isoform 1
[Homo sapiens]
Length = 914
Score = 68.6 bits (166), Expect = 2e-11
Identities = 48/137 (35%), Positives = 68/137 (49%), Gaps = 13/137 (9%)
Query: 62 GNAELSEDICKEYEVMYSSSCETTRNTTGIEESTDGMILGPEDLSYQIYDVSGESNSAVS 121
GN L+ D Y Y E T E +T M + Q+Y V
Sbjct: 164 GNPRLNFD----YSYGYQEHGERTDQPFQTELNTSMMYYYDDGTGVQVYPVEEAL----- 214
Query: 122 TEDLKECLKKQLEFCFSRENLSKDLYLISQMDSDQFIPIWTVANMEEIKKLTTDPDLILE 181
LKE +K+Q+E+ FS ENL +D +L +MD F+PI +A + ++ LTT+ +LILE
Sbjct: 215 ---LKEYIKRQIEYYFSVENLERDFFLRGKMDEQGFLPISLIAGFQRVQALTTNLNLILE 271
Query: 182 VLRSSPMVQ-VDEKGEK 197
L+ S V+ VDEK K
Sbjct: 272 ALKDSTEVEIVDEKMRK 288
>gi|109809739 La ribonucleoprotein domain family, member 7 [Homo
sapiens]
Length = 582
Score = 54.3 bits (129), Expect = 4e-07
Identities = 46/176 (26%), Positives = 80/176 (45%), Gaps = 31/176 (17%)
Query: 129 LKKQLEFCFSRENLSKDLYLISQMDS--DQFIPIWTVANMEEIKKLTTDPDLILEVLRSS 186
+ KQ++F F NL KD +L Q++ D ++ I + + ++KKLTTD LI LRSS
Sbjct: 38 IAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALRSS 97
Query: 187 PMVQVDEKGEKVR---------PSHKRCIVILREIPETTPIEEVKGLFKSENCPKVISCE 237
+V++D +G ++R V + +P+ ++ +F C V+
Sbjct: 98 AVVELDLEGTRIRRKKPLGERPKDEDERTVYVELLPKNVNHSWIERVF--GKCGNVVYIS 155
Query: 238 FAHNSNW-------YITFQSDTDAQQAFKYLR---EEV--------KTFQGKPIMA 275
H + ++ F++ A +A ++L EE KT + KPI A
Sbjct: 156 IPHYKSTGDPKGFAFVEFETKEQAAKAIEFLNNPPEEAPRKPGIFPKTVKNKPIPA 211
>gi|109809741 La ribonucleoprotein domain family, member 7 [Homo
sapiens]
Length = 582
Score = 54.3 bits (129), Expect = 4e-07
Identities = 46/176 (26%), Positives = 80/176 (45%), Gaps = 31/176 (17%)
Query: 129 LKKQLEFCFSRENLSKDLYLISQMDS--DQFIPIWTVANMEEIKKLTTDPDLILEVLRSS 186
+ KQ++F F NL KD +L Q++ D ++ I + + ++KKLTTD LI LRSS
Sbjct: 38 IAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALRSS 97
Query: 187 PMVQVDEKGEKVR---------PSHKRCIVILREIPETTPIEEVKGLFKSENCPKVISCE 237
+V++D +G ++R V + +P+ ++ +F C V+
Sbjct: 98 AVVELDLEGTRIRRKKPLGERPKDEDERTVYVELLPKNVNHSWIERVF--GKCGNVVYIS 155
Query: 238 FAHNSNW-------YITFQSDTDAQQAFKYLR---EEV--------KTFQGKPIMA 275
H + ++ F++ A +A ++L EE KT + KPI A
Sbjct: 156 IPHYKSTGDPKGFAFVEFETKEQAAKAIEFLNNPPEEAPRKPGIFPKTVKNKPIPA 211
>gi|239753842 PREDICTED: similar to hCG2040199 [Homo sapiens]
Length = 315
Score = 53.5 bits (127), Expect = 7e-07
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Query: 105 LSYQIYDVSGESNSAVSTEDLKECLKKQLEFCFSRENLSKDLYLISQMDSDQFIPIWTVA 164
+ Y D +G V LKEC+K+Q+E F+ EN +D +L + +PI+ +A
Sbjct: 201 MMYYYDDGTGVQVYRVEEALLKECIKRQIEHYFNAENSERDYFLRGKRGEQDSLPIFLIA 260
Query: 165 NMEEIKKLTTDPDLILEVLRSSPMVQVDEKGEKVRPSHKR 204
+ ++ LTT +LI E L+ S V++ EK+R +++
Sbjct: 261 GFQRVQALTT--NLITEALKDSTEVEI--MNEKMRKKNQK 296
>gi|169166778 PREDICTED: similar to hCG2040199 [Homo sapiens]
Length = 315
Score = 53.5 bits (127), Expect = 7e-07
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Query: 105 LSYQIYDVSGESNSAVSTEDLKECLKKQLEFCFSRENLSKDLYLISQMDSDQFIPIWTVA 164
+ Y D +G V LKEC+K+Q+E F+ EN +D +L + +PI+ +A
Sbjct: 201 MMYYYDDGTGVQVYRVEEALLKECIKRQIEHYFNAENSERDYFLRGKRGEQDSLPIFLIA 260
Query: 165 NMEEIKKLTTDPDLILEVLRSSPMVQVDEKGEKVRPSHKR 204
+ ++ LTT +LI E L+ S V++ EK+R +++
Sbjct: 261 GFQRVQALTT--NLITEALKDSTEVEI--MNEKMRKKNQK 296
>gi|169166363 PREDICTED: similar to hCG2040199 [Homo sapiens]
Length = 315
Score = 53.5 bits (127), Expect = 7e-07
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Query: 105 LSYQIYDVSGESNSAVSTEDLKECLKKQLEFCFSRENLSKDLYLISQMDSDQFIPIWTVA 164
+ Y D +G V LKEC+K+Q+E F+ EN +D +L + +PI+ +A
Sbjct: 201 MMYYYDDGTGVQVYRVEEALLKECIKRQIEHYFNAENSERDYFLRGKRGEQDSLPIFLIA 260
Query: 165 NMEEIKKLTTDPDLILEVLRSSPMVQVDEKGEKVRPSHKR 204
+ ++ LTT +LI E L+ S V++ EK+R +++
Sbjct: 261 GFQRVQALTT--NLITEALKDSTEVEI--MNEKMRKKNQK 296
>gi|37537710 La ribonucleoprotein domain family, member 6 isoform 1
[Homo sapiens]
Length = 491
Score = 45.4 bits (106), Expect = 2e-04
Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 20/111 (18%)
Query: 123 EDLKECLKKQLEFCFSRENLSKDLYLISQMDSDQ--FIPIWTVANMEEIKKLTTDPDLIL 180
E+L + L Q+EF FS ENL KD +L+ + ++ ++ + + + +++K LT D
Sbjct: 90 EELIKKLVDQIEFYFSDENLEKDAFLLKHVRRNKLGYVSVKLLTSFKKVKHLTRDWRTTA 149
Query: 181 EVLRSSPMVQVDEKGEKVRPSHKRCIVILREIPETTPIEEVKGLFKSENCP 231
L+ S +++++E KVR TTP+ LF +EN P
Sbjct: 150 HALKYSVVLELNEDHRKVR--------------RTTPVP----LFPNENLP 182
>gi|21536423 amphiphysin isoform 2 [Homo sapiens]
Length = 653
Score = 45.4 bits (106), Expect = 2e-04
Identities = 40/116 (34%), Positives = 55/116 (47%), Gaps = 15/116 (12%)
Query: 589 SPPSTTKPSRASTASPCNNNINAATAVALQEPRKLSYAEVCQKPPKEPSSVLVQPLRELR 648
SPP P + TASP N+ A + A PR S +K P P V P +EL+
Sbjct: 262 SPPEEPSPLPSPTASP--NHTLAPASPAPARPRSPSQT---RKGPPVPPLPKVTPTKELQ 316
Query: 649 S-NVVSPTKNEDNGAPENSVEKP--HEKPEARASK-----DYSGFRGNIIPRGAAG 696
N++S EDN PE SV P +E PE + + D+ F+ + P G+AG
Sbjct: 317 QENIISFF--EDNFVPEISVTTPSQNEVPEVKKEETLLDLDFDPFKPEVTPAGSAG 370
>gi|4502081 amphiphysin isoform 1 [Homo sapiens]
Length = 695
Score = 45.4 bits (106), Expect = 2e-04
Identities = 40/116 (34%), Positives = 55/116 (47%), Gaps = 15/116 (12%)
Query: 589 SPPSTTKPSRASTASPCNNNINAATAVALQEPRKLSYAEVCQKPPKEPSSVLVQPLRELR 648
SPP P + TASP N+ A + A PR S +K P P V P +EL+
Sbjct: 262 SPPEEPSPLPSPTASP--NHTLAPASPAPARPRSPSQT---RKGPPVPPLPKVTPTKELQ 316
Query: 649 S-NVVSPTKNEDNGAPENSVEKP--HEKPEARASK-----DYSGFRGNIIPRGAAG 696
N++S EDN PE SV P +E PE + + D+ F+ + P G+AG
Sbjct: 317 QENIISFF--EDNFVPEISVTTPSQNEVPEVKKEETLLDLDFDPFKPEVTPAGSAG 370
>gi|218083800 Rho GTPase-activating protein isoform 1 [Homo sapiens]
Length = 2087
Score = 45.1 bits (105), Expect = 2e-04
Identities = 63/281 (22%), Positives = 107/281 (38%), Gaps = 41/281 (14%)
Query: 376 FQKNRVKPQFR----SSGGSEHSTEGSVSLGDGQLNRYSSRNFPAERHNPT-VTGHQ-EQ 429
FQ +R QF + G +H + + GD +S+ E+H+ +TG+Q Q
Sbjct: 1098 FQTDRPAEQFHLQNNAPGNCDHPLPETTATGDPT---HSNTTESGEQHHQVDLTGNQPHQ 1154
Query: 430 TYLQKETSTLQVEQNGDYGRGRRTLFRGRRRREDDRISRPHPSTAESKAPTPKFDLLASN 489
YL +GD + R T + DD +S P + ++ PT F L
Sbjct: 1155 AYL-----------SGDPEKARITSVPLDSEKSDDHVSFPEDQSGKNSMPTVSF-LDQDQ 1202
Query: 490 FPPLPGSSSRMPGELVLENRMSDVVKGVYKEKDNEELTISCP-----VPADEQTECTSAQ 544
PP S + P L D + + D + P P+ E TS
Sbjct: 1203 SPPRFYSGDQPPSYL---GASVDKLHHPLEFADKSPTPPNLPSDKIYPPSGSPEENTSTA 1259
Query: 545 QLNMSTSSPCAAELTALSTTQQEKDLIED------SSVQKDGLNQTTIPVSPPSTTKPSR 598
+ T++P A+ +ST + D+ E ++ ++T P+ PP + R
Sbjct: 1260 TMTYMTTTPATAQ---MSTKEASWDVAEQPTTADFAAATLQRTHRTNRPLPPPPS---QR 1313
Query: 599 ASTASPCNNNINAATAVALQEPRKLSYAEVCQKPPKEPSSV 639
++ P + AAT + L K+ + P EP ++
Sbjct: 1314 SAEQPPVVGQVQAATNIGLNNSHKVQGVVPVPERPPEPRAM 1354
>gi|29469071 Rho GTPase-activating protein isoform 2 [Homo sapiens]
Length = 1738
Score = 45.1 bits (105), Expect = 2e-04
Identities = 63/281 (22%), Positives = 107/281 (38%), Gaps = 41/281 (14%)
Query: 376 FQKNRVKPQFR----SSGGSEHSTEGSVSLGDGQLNRYSSRNFPAERHNPT-VTGHQ-EQ 429
FQ +R QF + G +H + + GD +S+ E+H+ +TG+Q Q
Sbjct: 749 FQTDRPAEQFHLQNNAPGNCDHPLPETTATGDPT---HSNTTESGEQHHQVDLTGNQPHQ 805
Query: 430 TYLQKETSTLQVEQNGDYGRGRRTLFRGRRRREDDRISRPHPSTAESKAPTPKFDLLASN 489
YL +GD + R T + DD +S P + ++ PT F L
Sbjct: 806 AYL-----------SGDPEKARITSVPLDSEKSDDHVSFPEDQSGKNSMPTVSF-LDQDQ 853
Query: 490 FPPLPGSSSRMPGELVLENRMSDVVKGVYKEKDNEELTISCP-----VPADEQTECTSAQ 544
PP S + P L D + + D + P P+ E TS
Sbjct: 854 SPPRFYSGDQPPSYL---GASVDKLHHPLEFADKSPTPPNLPSDKIYPPSGSPEENTSTA 910
Query: 545 QLNMSTSSPCAAELTALSTTQQEKDLIED------SSVQKDGLNQTTIPVSPPSTTKPSR 598
+ T++P A+ +ST + D+ E ++ ++T P+ PP + R
Sbjct: 911 TMTYMTTTPATAQ---MSTKEASWDVAEQPTTADFAAATLQRTHRTNRPLPPPPS---QR 964
Query: 599 ASTASPCNNNINAATAVALQEPRKLSYAEVCQKPPKEPSSV 639
++ P + AAT + L K+ + P EP ++
Sbjct: 965 SAEQPPVVGQVQAATNIGLNNSHKVQGVVPVPERPPEPRAM 1005
>gi|10835067 autoantigen La [Homo sapiens]
Length = 408
Score = 40.4 bits (93), Expect = 0.006
Identities = 28/103 (27%), Positives = 53/103 (51%), Gaps = 11/103 (10%)
Query: 117 NSAVSTEDLKECLKKQLEFCFSRENLSKDLYLISQMDSDQ-FIPIWTVANMEEIKKLTTD 175
N ++ + K C Q+E+ F NL +D +L Q+ D+ ++P+ + + +LTTD
Sbjct: 7 NEKMAALEAKIC--HQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLTTD 64
Query: 176 PDLILEVLRSS--PMVQVDEKGEKVRPSHKRCIVILREIPETT 216
++I+E L S ++++ E K+R S + +PE T
Sbjct: 65 FNVIVEALSKSKAELMEISEDKTKIRRSPS------KPLPEVT 101
>gi|34335264 zinc finger, MYND-type containing 8 isoform c [Homo
sapiens]
Length = 1135
Score = 40.4 bits (93), Expect = 0.006
Identities = 36/145 (24%), Positives = 60/145 (41%), Gaps = 5/145 (3%)
Query: 475 ESKAPTPKFDLLASNFPPLPGSSSRMPGELVLENRMS---DVVKGVYKEKDNEELTISCP 531
E K P+PK D++ PP S P E + R S + +T++ P
Sbjct: 727 EPKEPSPKQDVVGKT-PPSTTVGSHSPPETPVLTRSSAQTSAAGATATTSTSSTVTVTAP 785
Query: 532 VPADEQTECTSAQQLNMSTSSPCAAELTALSTTQQEKDLIEDSSVQKDGLNQTTIPVSPP 591
PA + + L ++P + S+T Q+K++ + S L T+ SP
Sbjct: 786 APAATGSPVKKQRPLLPKETAPAVQRVVWNSSTVQQKEITQSPSTSTITL-VTSTQSSPL 844
Query: 592 STTKPSRASTASPCNNNINAATAVA 616
T+ S ++ S N ++ ATA A
Sbjct: 845 VTSSGSMSTLVSSVNADLPIATASA 869
>gi|34335262 zinc finger, MYND-type containing 8 isoform a [Homo
sapiens]
Length = 1188
Score = 40.4 bits (93), Expect = 0.006
Identities = 36/145 (24%), Positives = 60/145 (41%), Gaps = 5/145 (3%)
Query: 475 ESKAPTPKFDLLASNFPPLPGSSSRMPGELVLENRMS---DVVKGVYKEKDNEELTISCP 531
E K P+PK D++ PP S P E + R S + +T++ P
Sbjct: 752 EPKEPSPKQDVVGKT-PPSTTVGSHSPPETPVLTRSSAQTSAAGATATTSTSSTVTVTAP 810
Query: 532 VPADEQTECTSAQQLNMSTSSPCAAELTALSTTQQEKDLIEDSSVQKDGLNQTTIPVSPP 591
PA + + L ++P + S+T Q+K++ + S L T+ SP
Sbjct: 811 APAATGSPVKKQRPLLPKETAPAVQRVVWNSSTVQQKEITQSPSTSTITL-VTSTQSSPL 869
Query: 592 STTKPSRASTASPCNNNINAATAVA 616
T+ S ++ S N ++ ATA A
Sbjct: 870 VTSSGSMSTLVSSVNADLPIATASA 894
>gi|34335266 zinc finger, MYND-type containing 8 isoform b [Homo
sapiens]
Length = 1160
Score = 40.4 bits (93), Expect = 0.006
Identities = 36/145 (24%), Positives = 60/145 (41%), Gaps = 5/145 (3%)
Query: 475 ESKAPTPKFDLLASNFPPLPGSSSRMPGELVLENRMS---DVVKGVYKEKDNEELTISCP 531
E K P+PK D++ PP S P E + R S + +T++ P
Sbjct: 752 EPKEPSPKQDVVGKT-PPSTTVGSHSPPETPVLTRSSAQTSAAGATATTSTSSTVTVTAP 810
Query: 532 VPADEQTECTSAQQLNMSTSSPCAAELTALSTTQQEKDLIEDSSVQKDGLNQTTIPVSPP 591
PA + + L ++P + S+T Q+K++ + S L T+ SP
Sbjct: 811 APAATGSPVKKQRPLLPKETAPAVQRVVWNSSTVQQKEITQSPSTSTITL-VTSTQSSPL 869
Query: 592 STTKPSRASTASPCNNNINAATAVA 616
T+ S ++ S N ++ ATA A
Sbjct: 870 VTSSGSMSTLVSSVNADLPIATASA 894
>gi|47578107 delangin isoform B [Homo sapiens]
Length = 2697
Score = 37.0 bits (84), Expect = 0.065
Identities = 81/369 (21%), Positives = 148/369 (40%), Gaps = 69/369 (18%)
Query: 272 PIMARIKAINTFFAKNG-----YRLMDSSIYSHPIQTQAQYASPVFMQPV--YNPHQQYS 324
P + R K++ + ++G Y+L +S++S P + Q + + P + P Q S
Sbjct: 104 PNVFREKSMQNRYVQSGMMMSQYKLSQNSMHSSPASSNYQQTT-ISHSPSSRFVPPQTSS 162
Query: 325 VYSIVPQSWSPNPTPYF-ETPLAPFPNGSFVNGFNSPGSYKTNAAAMNMGRPFQKNRVKP 383
+PQ SP P+PY ++P P ++ P SY T+ P
Sbjct: 163 GNRFMPQQNSPVPSPYAPQSPAGYMP-------YSHPSSYTTH----------------P 199
Query: 384 QFRSSGGSEHSTEGSV-SLGDGQLNRYSSRNFPAERH--NPTVTGHQEQTYLQKETSTLQ 440
Q + + S G + ++ D +++ S N A H NP ++ ++ S+
Sbjct: 200 QMQQASVSSPIVAGGLRNIHDNKVSGPLSGN-SANHHADNPRHGSSEDYLHMVHRLSS-- 256
Query: 441 VEQNGDYGRGRRTLFRGRRRREDDRISRPHPSTAESKAPTPKFDLLASNFPPLPGSSSR- 499
+GD R R + P S K P L + + LP SS R
Sbjct: 257 --DDGDSSTMRNA--ASFPLRSPQPVCSPAGSEGTPKGSRPPLILQSQS---LPCSSPRD 309
Query: 500 MPGELVLENRMSDVVKGVYKEKDNEELTISCPVPADEQTECTSAQQLNMSTSSPCAAELT 559
+P +++L++ + K ++ + EQ+E + + +S+ S + +LT
Sbjct: 310 VPPDILLDSP---------ERKQKKQKKMKLGKDEKEQSEKAAMYDI-ISSPSKDSTKLT 359
Query: 560 ------ALSTTQQEKDLIEDSSVQKDGLNQTTIPVS---PPSTTKPSRASTASPCNNNIN 610
S Q++D+I S V+ +++ IP + P T+K T N +N
Sbjct: 360 LRLSRVRSSDMDQQEDMI--SGVENSNVSENDIPFNVQYPGQTSK--TPITPQDINRPLN 415
Query: 611 AATAVALQE 619
AA ++ QE
Sbjct: 416 AAQCLSQQE 424
>gi|47578105 delangin isoform A [Homo sapiens]
Length = 2804
Score = 37.0 bits (84), Expect = 0.065
Identities = 81/369 (21%), Positives = 148/369 (40%), Gaps = 69/369 (18%)
Query: 272 PIMARIKAINTFFAKNG-----YRLMDSSIYSHPIQTQAQYASPVFMQPV--YNPHQQYS 324
P + R K++ + ++G Y+L +S++S P + Q + + P + P Q S
Sbjct: 104 PNVFREKSMQNRYVQSGMMMSQYKLSQNSMHSSPASSNYQQTT-ISHSPSSRFVPPQTSS 162
Query: 325 VYSIVPQSWSPNPTPYF-ETPLAPFPNGSFVNGFNSPGSYKTNAAAMNMGRPFQKNRVKP 383
+PQ SP P+PY ++P P ++ P SY T+ P
Sbjct: 163 GNRFMPQQNSPVPSPYAPQSPAGYMP-------YSHPSSYTTH----------------P 199
Query: 384 QFRSSGGSEHSTEGSV-SLGDGQLNRYSSRNFPAERH--NPTVTGHQEQTYLQKETSTLQ 440
Q + + S G + ++ D +++ S N A H NP ++ ++ S+
Sbjct: 200 QMQQASVSSPIVAGGLRNIHDNKVSGPLSGN-SANHHADNPRHGSSEDYLHMVHRLSS-- 256
Query: 441 VEQNGDYGRGRRTLFRGRRRREDDRISRPHPSTAESKAPTPKFDLLASNFPPLPGSSSR- 499
+GD R R + P S K P L + + LP SS R
Sbjct: 257 --DDGDSSTMRNA--ASFPLRSPQPVCSPAGSEGTPKGSRPPLILQSQS---LPCSSPRD 309
Query: 500 MPGELVLENRMSDVVKGVYKEKDNEELTISCPVPADEQTECTSAQQLNMSTSSPCAAELT 559
+P +++L++ + K ++ + EQ+E + + +S+ S + +LT
Sbjct: 310 VPPDILLDSP---------ERKQKKQKKMKLGKDEKEQSEKAAMYDI-ISSPSKDSTKLT 359
Query: 560 ------ALSTTQQEKDLIEDSSVQKDGLNQTTIPVS---PPSTTKPSRASTASPCNNNIN 610
S Q++D+I S V+ +++ IP + P T+K T N +N
Sbjct: 360 LRLSRVRSSDMDQQEDMI--SGVENSNVSENDIPFNVQYPGQTSK--TPITPQDINRPLN 415
Query: 611 AATAVALQE 619
AA ++ QE
Sbjct: 416 AAQCLSQQE 424
>gi|149944526 additional sex combs like 3 [Homo sapiens]
Length = 2248
Score = 36.6 bits (83), Expect = 0.085
Identities = 45/149 (30%), Positives = 63/149 (42%), Gaps = 12/149 (8%)
Query: 536 EQTECTSAQQLNMSTSSPCAAELTALSTTQQEKDL---IEDSSVQKDGLNQTTIPVSPPS 592
E +E + L +++ + + L S T DL E SSV L T VS S
Sbjct: 688 EISEASLMSNLPLTSEASPVSNLPLTSETSPMSDLPLTSETSSVSSMLLTSETTFVS--S 745
Query: 593 TTKPSRASTASPCNNNINAATAVALQEPRKLSYAEVCQKPPKEPSSVLVQPLRELRSNVV 652
PS S S N++IN +A Q+ + S +E P K+ SS +PL E N+
Sbjct: 746 LPLPSETSPIS--NSSINER--MAHQQRKSPSVSEEPLSPQKDESSATAKPLGE---NLT 798
Query: 653 SPTKNEDNGAPENSVEKPHEKPEARASKD 681
S KN N + PEA S+D
Sbjct: 799 SQQKNLSNTPEPIIMSSSSIAPEAFPSED 827
>gi|4758216 dishevelled 2 [Homo sapiens]
Length = 736
Score = 35.8 bits (81), Expect = 0.14
Identities = 28/95 (29%), Positives = 40/95 (42%), Gaps = 9/95 (9%)
Query: 330 PQSWSPNPTPYFETPLAPFPNGS----FVNGFNSPGSYKTNAAAMNMGRPFQKNRVKPQF 385
P +SP P PY E + GS G S GS +++ A GRP ++ P+
Sbjct: 558 PHPYSPQPPPYHELSSYTYGGGSASSQHSEGSRSSGSTRSDGGAGRTGRPEER---APES 614
Query: 386 RSSGGSEH--STEGSVSLGDGQLNRYSSRNFPAER 418
+S GSE S+ G G+ + S P R
Sbjct: 615 KSGSGSESEPSSRGGSLRRGGEASGTSDGGPPPSR 649
>gi|112382212 SEC24 (S. cerevisiae) homolog B isoform a [Homo
sapiens]
Length = 1268
Score = 35.8 bits (81), Expect = 0.14
Identities = 66/324 (20%), Positives = 111/324 (34%), Gaps = 66/324 (20%)
Query: 349 PNGSFVNGFNSPGSYKTNAAAMNMGRPFQKNRVKPQFRSSGGSEHSTEGSVSLGDGQLNR 408
P SFVN +NSP Y +++ + G P S+ + S+ GD
Sbjct: 151 PYSSFVNHYNSPAMYSASSSVASQGFPSTCGHYAMSTVSNAAYPSVSYPSLPAGDTYGQM 210
Query: 409 YSSRNFPAER---------------------HNPTVTGHQEQT----------------- 430
++S+N P R P+ HQ+Q+
Sbjct: 211 FTSQNAPTVRPVKDNSFSGQNTAISHPSPLPPLPSQQHHQQQSLSGYSTLTWSSPGLPST 270
Query: 431 ---YLQKETSTLQVEQNGDYGRGRRTLFRGRRRREDDRISRPHPST------AESKAPTP 481
++ T +L V N +L + S P ST S TP
Sbjct: 271 QDNLIRNHTGSLAVANNNPTITVADSLSCPVMQNVQPPKSSPVVSTVLSGSSGSSSTRTP 330
Query: 482 KFDLLASNFPPLPGSSSRMPGELVLENRMSDVVKGV-YKEKDNEELTISCPVPADEQTEC 540
+N P P +S P EL+ + KGV Y E N + + S P P ++
Sbjct: 331 P----TANHPVEPVTSVTQPSELLQQ-------KGVQYGEYVNNQAS-SAPTPLSSTSDD 378
Query: 541 TSAQQLNMSTSSPCAAELTALSTTQQEKDLIEDSSVQKDGLNQTTIPVSPPSTTKPSRAS 600
++ + ++ ++ S D +E S D L+ + +P +P AS
Sbjct: 379 EEEEEEDEEAGVDSSSTTSSASPMPNSYDALEGGS-YPDMLSSSASSPAPDPAPEPDPAS 437
Query: 601 TASPCNNNINAATAVALQEPRKLS 624
+P +A A + +P K++
Sbjct: 438 APAPA-----SAPAPVVPQPSKMA 456
Score = 32.0 bits (71), Expect = 2.1
Identities = 50/210 (23%), Positives = 73/210 (34%), Gaps = 27/210 (12%)
Query: 303 TQAQYASPVFMQPVYNPHQQYSVYSIVPQSWSPNPTPYFETPLAPFPNGSFVNGFNSPGS 362
T + SP+ P HQQ S+ +WS P + L GS N+P
Sbjct: 232 TAISHPSPLPPLPSQQHHQQQSLSGYSTLTWSSPGLPSTQDNLIRNHTGSLAVANNNP-- 289
Query: 363 YKTNAAAMNMGRPFQKNRVKPQFRSSGGSEHSTEGSVSLGDGQLNRYSSRNFPAERHNPT 422
T A ++ P +N P+ ST S S G + N P E P
Sbjct: 290 --TITVADSLSCPVMQNVQPPK----SSPVVSTVLSGSSGSSSTRTPPTANHPVE---PV 340
Query: 423 VTGHQEQTYLQKETSTLQVEQNGDYGRGR---------RTLFRGRRRREDDRISRPHPST 473
+ Q LQ++ Q G+Y + T ED+ ST
Sbjct: 341 TSVTQPSELLQQKG-----VQYGEYVNNQASSAPTPLSSTSDDEEEEEEDEEAGVDSSST 395
Query: 474 AESKAPTP-KFDLL-ASNFPPLPGSSSRMP 501
S +P P +D L ++P + SS+ P
Sbjct: 396 TSSASPMPNSYDALEGGSYPDMLSSSASSP 425
>gi|87162461 fragile X mental retardation 2 [Homo sapiens]
Length = 1311
Score = 35.4 bits (80), Expect = 0.19
Identities = 47/202 (23%), Positives = 72/202 (35%), Gaps = 11/202 (5%)
Query: 471 PSTAESKAPTPKFDLLASNFPPLPGSSSRMPGELVLENRMS--DVVKGVYKEKDNEELTI 528
PS A SK PKF +L ++ LP S + E++ E S + ++ +E+ T
Sbjct: 328 PSAASSKTKLPKFTILQTSEVSLPSDPSCVE-EILREMTHSWPTPLTSMHTAGHSEQSTF 386
Query: 529 SCPVPADEQTECTSAQQLNMSTSSPCAAELTALSTTQQEKDLIEDSSVQKDGLNQTTIPV 588
S +P E T L A ++S +D ++ SS + D T+
Sbjct: 387 S--IPGQESQHLTPGFTLQKWNDPTTRASTKSVSFKSMLEDDLKLSSDEDDLEPVKTLTT 444
Query: 589 SPPSTTKPSRASTASPCNNNINAATAVALQEPRKLSYAEVCQKPPKEPSSVLVQPLRELR 648
+T A P NN +N A P + E SS
Sbjct: 445 QCTATELYQAVEKAKPRNNPVNPPLATPQPPPAVQASGGSGSSSESESSS------ESDS 498
Query: 649 SNVVSPTKNEDNGAPENSVEKP 670
S T +E N AP + +P
Sbjct: 499 DTESSTTDSESNEAPRVATPEP 520
>gi|112382214 SEC24 (S. cerevisiae) homolog B isoform b [Homo
sapiens]
Length = 1233
Score = 35.4 bits (80), Expect = 0.19
Identities = 57/285 (20%), Positives = 95/285 (33%), Gaps = 23/285 (8%)
Query: 349 PNGSFVNGFNSPGSYKTNAAAMNMGRPFQKNRVKPQFRSSGGSEHSTEGSVSLGDGQLNR 408
P SFVN +NSP Y +++ + G P S+ + S+ GD
Sbjct: 151 PYSSFVNHYNSPAMYSASSSVASQGFPSTCGHYAMSTVSNAAYPSVSYPSLPAGDTYGQM 210
Query: 409 YSSRNFPAER------HNPTVTGHQEQTYLQKETSTLQVEQNGDYGRGRRTLFRGRRRRE 462
++S+N P R + T + L S +Q G T
Sbjct: 211 FTSQNAPTVRPVKDNSFSGQNTAISHPSPLPPLPSQQHHQQQSLSGYSTLTWSSPGLPST 270
Query: 463 DDRISRPHPSTAESKAPTPKFDLLASNFPPLPGSSSRMPGELVLENRMSDVVKGVYKEKD 522
D + R H + P + S P+ + V + S VV V
Sbjct: 271 QDNLIRNHTGSLAVANNNPTITVADSLSCPVM--------QNVQPPKSSPVVSTVLSGSS 322
Query: 523 NEELTISCPV---PADEQTECTSAQQLNMSTSSPCAAELTALSTTQQEKDLIEDSSVQKD 579
T + P P + T T +L ++ ++ S D +E S D
Sbjct: 323 GSSSTRTPPTANHPVEPVTSVTQPSELLQQKGVDSSSTTSSASPMPNSYDALEGGS-YPD 381
Query: 580 GLNQTTIPVSPPSTTKPSRASTASPCNNNINAATAVALQEPRKLS 624
L+ + +P +P AS +P +A A + +P K++
Sbjct: 382 MLSSSASSPAPDPAPEPDPASAPAPA-----SAPAPVVPQPSKMA 421
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.128 0.370
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,061,065
Number of Sequences: 37866
Number of extensions: 1580680
Number of successful extensions: 4647
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 86
Number of HSP's that attempted gapping in prelim test: 4447
Number of HSP's gapped (non-prelim): 293
length of query: 730
length of database: 18,247,518
effective HSP length: 110
effective length of query: 620
effective length of database: 14,082,258
effective search space: 8730999960
effective search space used: 8730999960
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.