BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|40317616 transmembrane prostate androgen-induced protein isoform b [Homo sapiens] (252 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|40317616 transmembrane prostate androgen-induced protein isof... 523 e-149 gi|21361841 transmembrane prostate androgen-induced protein isof... 520 e-148 gi|40317620 transmembrane prostate androgen-induced protein isof... 498 e-141 gi|40317618 transmembrane prostate androgen-induced protein isof... 498 e-141 gi|4757884 hypothetical protein LOC753 isoform beta 1 [Homo sapi... 327 6e-90 gi|51093708 hypothetical protein LOC753 isoform gamma 1 [Homo sa... 327 6e-90 gi|41281943 hypothetical protein LOC753 isoform alpha 1 [Homo sa... 326 1e-89 gi|41281948 hypothetical protein LOC753 isoform beta 2 [Homo sap... 304 6e-83 gi|51093710 hypothetical protein LOC753 isoform gamma 2 [Homo sa... 304 6e-83 gi|41281957 hypothetical protein LOC753 isoform alpha 2 [Homo sa... 303 1e-82 gi|148596988 mucoepidermoid carcinoma translocated 1 isoform 3 [... 40 0.002 gi|148596965 mucoepidermoid carcinoma translocated 1 isoform 1 [... 40 0.002 gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 40 0.003 gi|217035107 pre-mRNA cleavage factor I, 59 kDa subunit isoform ... 39 0.004 gi|209862881 pre-mRNA cleavage factor I, 59 kDa subunit isoform ... 36 0.028 gi|217035102 pre-mRNA cleavage factor I, 59 kDa subunit isoform ... 36 0.028 gi|163914392 glioma tumor suppressor candidate region gene 1 [Ho... 36 0.028 gi|55750053 atrophin-1 [Homo sapiens] 35 0.062 gi|55750041 atrophin-1 [Homo sapiens] 35 0.062 gi|209862845 nuclear factor of activated T-cells, cytoplasmic, c... 35 0.081 gi|27886563 nuclear factor of activated T-cells, cytoplasmic, ca... 35 0.081 gi|241982780 programmed cell death 6 interacting protein isoform... 34 0.11 gi|22027538 programmed cell death 6 interacting protein isoform ... 34 0.11 gi|4502523 calcium channel, voltage-dependent, N type, alpha 1B ... 34 0.11 gi|55953100 tubby like protein 4 isoform 1 [Homo sapiens] 34 0.11 gi|154800453 tastin isoform 1 [Homo sapiens] 33 0.18 gi|169234649 smoothelin-like 2 isoform 2 [Homo sapiens] 33 0.24 gi|169234647 smoothelin-like 2 isoform 1 [Homo sapiens] 33 0.24 gi|206597543 hypothetical protein LOC118461 isoform 1 [Homo sapi... 32 0.40 gi|116256464 hypothetical protein LOC343990 [Homo sapiens] 32 0.40 >gi|40317616 transmembrane prostate androgen-induced protein isoform b [Homo sapiens] Length = 252 Score = 523 bits (1348), Expect = e-149 Identities = 252/252 (100%), Positives = 252/252 (100%) Query: 1 MAELEFVQIIIIVVVMMVMVVVITCLLSHYKLSARSFISRHSQGRRREDALSSEGCLWPS 60 MAELEFVQIIIIVVVMMVMVVVITCLLSHYKLSARSFISRHSQGRRREDALSSEGCLWPS Sbjct: 1 MAELEFVQIIIIVVVMMVMVVVITCLLSHYKLSARSFISRHSQGRRREDALSSEGCLWPS 60 Query: 61 ESTVSGNGIPEPQVYAPPRPTDRLAVPPFAQRERFHRFQPTYPYLQHEIDLPPTISLSDG 120 ESTVSGNGIPEPQVYAPPRPTDRLAVPPFAQRERFHRFQPTYPYLQHEIDLPPTISLSDG Sbjct: 61 ESTVSGNGIPEPQVYAPPRPTDRLAVPPFAQRERFHRFQPTYPYLQHEIDLPPTISLSDG 120 Query: 121 EEPPPYQGPCTLQLRDPEQQLELNRESVRAPPNRTIFDSDLMDSARLGGPCPPSSNSGIS 180 EEPPPYQGPCTLQLRDPEQQLELNRESVRAPPNRTIFDSDLMDSARLGGPCPPSSNSGIS Sbjct: 121 EEPPPYQGPCTLQLRDPEQQLELNRESVRAPPNRTIFDSDLMDSARLGGPCPPSSNSGIS 180 Query: 181 ATCYGSGGRMEGPPPTYSEVIGHYPGSSFQHQQSSGPPSLLEGTRLHHTHIAPLESAAIW 240 ATCYGSGGRMEGPPPTYSEVIGHYPGSSFQHQQSSGPPSLLEGTRLHHTHIAPLESAAIW Sbjct: 181 ATCYGSGGRMEGPPPTYSEVIGHYPGSSFQHQQSSGPPSLLEGTRLHHTHIAPLESAAIW 240 Query: 241 SKEKDKQKGHPL 252 SKEKDKQKGHPL Sbjct: 241 SKEKDKQKGHPL 252 >gi|21361841 transmembrane prostate androgen-induced protein isoform a [Homo sapiens] Length = 287 Score = 520 bits (1340), Expect = e-148 Identities = 250/252 (99%), Positives = 251/252 (99%) Query: 1 MAELEFVQIIIIVVVMMVMVVVITCLLSHYKLSARSFISRHSQGRRREDALSSEGCLWPS 60 + ELEFVQIIIIVVVMMVMVVVITCLLSHYKLSARSFISRHSQGRRREDALSSEGCLWPS Sbjct: 36 ITELEFVQIIIIVVVMMVMVVVITCLLSHYKLSARSFISRHSQGRRREDALSSEGCLWPS 95 Query: 61 ESTVSGNGIPEPQVYAPPRPTDRLAVPPFAQRERFHRFQPTYPYLQHEIDLPPTISLSDG 120 ESTVSGNGIPEPQVYAPPRPTDRLAVPPFAQRERFHRFQPTYPYLQHEIDLPPTISLSDG Sbjct: 96 ESTVSGNGIPEPQVYAPPRPTDRLAVPPFAQRERFHRFQPTYPYLQHEIDLPPTISLSDG 155 Query: 121 EEPPPYQGPCTLQLRDPEQQLELNRESVRAPPNRTIFDSDLMDSARLGGPCPPSSNSGIS 180 EEPPPYQGPCTLQLRDPEQQLELNRESVRAPPNRTIFDSDLMDSARLGGPCPPSSNSGIS Sbjct: 156 EEPPPYQGPCTLQLRDPEQQLELNRESVRAPPNRTIFDSDLMDSARLGGPCPPSSNSGIS 215 Query: 181 ATCYGSGGRMEGPPPTYSEVIGHYPGSSFQHQQSSGPPSLLEGTRLHHTHIAPLESAAIW 240 ATCYGSGGRMEGPPPTYSEVIGHYPGSSFQHQQSSGPPSLLEGTRLHHTHIAPLESAAIW Sbjct: 216 ATCYGSGGRMEGPPPTYSEVIGHYPGSSFQHQQSSGPPSLLEGTRLHHTHIAPLESAAIW 275 Query: 241 SKEKDKQKGHPL 252 SKEKDKQKGHPL Sbjct: 276 SKEKDKQKGHPL 287 >gi|40317620 transmembrane prostate androgen-induced protein isoform c [Homo sapiens] Length = 237 Score = 498 bits (1282), Expect = e-141 Identities = 237/237 (100%), Positives = 237/237 (100%) Query: 16 MMVMVVVITCLLSHYKLSARSFISRHSQGRRREDALSSEGCLWPSESTVSGNGIPEPQVY 75 MMVMVVVITCLLSHYKLSARSFISRHSQGRRREDALSSEGCLWPSESTVSGNGIPEPQVY Sbjct: 1 MMVMVVVITCLLSHYKLSARSFISRHSQGRRREDALSSEGCLWPSESTVSGNGIPEPQVY 60 Query: 76 APPRPTDRLAVPPFAQRERFHRFQPTYPYLQHEIDLPPTISLSDGEEPPPYQGPCTLQLR 135 APPRPTDRLAVPPFAQRERFHRFQPTYPYLQHEIDLPPTISLSDGEEPPPYQGPCTLQLR Sbjct: 61 APPRPTDRLAVPPFAQRERFHRFQPTYPYLQHEIDLPPTISLSDGEEPPPYQGPCTLQLR 120 Query: 136 DPEQQLELNRESVRAPPNRTIFDSDLMDSARLGGPCPPSSNSGISATCYGSGGRMEGPPP 195 DPEQQLELNRESVRAPPNRTIFDSDLMDSARLGGPCPPSSNSGISATCYGSGGRMEGPPP Sbjct: 121 DPEQQLELNRESVRAPPNRTIFDSDLMDSARLGGPCPPSSNSGISATCYGSGGRMEGPPP 180 Query: 196 TYSEVIGHYPGSSFQHQQSSGPPSLLEGTRLHHTHIAPLESAAIWSKEKDKQKGHPL 252 TYSEVIGHYPGSSFQHQQSSGPPSLLEGTRLHHTHIAPLESAAIWSKEKDKQKGHPL Sbjct: 181 TYSEVIGHYPGSSFQHQQSSGPPSLLEGTRLHHTHIAPLESAAIWSKEKDKQKGHPL 237 >gi|40317618 transmembrane prostate androgen-induced protein isoform c [Homo sapiens] Length = 237 Score = 498 bits (1282), Expect = e-141 Identities = 237/237 (100%), Positives = 237/237 (100%) Query: 16 MMVMVVVITCLLSHYKLSARSFISRHSQGRRREDALSSEGCLWPSESTVSGNGIPEPQVY 75 MMVMVVVITCLLSHYKLSARSFISRHSQGRRREDALSSEGCLWPSESTVSGNGIPEPQVY Sbjct: 1 MMVMVVVITCLLSHYKLSARSFISRHSQGRRREDALSSEGCLWPSESTVSGNGIPEPQVY 60 Query: 76 APPRPTDRLAVPPFAQRERFHRFQPTYPYLQHEIDLPPTISLSDGEEPPPYQGPCTLQLR 135 APPRPTDRLAVPPFAQRERFHRFQPTYPYLQHEIDLPPTISLSDGEEPPPYQGPCTLQLR Sbjct: 61 APPRPTDRLAVPPFAQRERFHRFQPTYPYLQHEIDLPPTISLSDGEEPPPYQGPCTLQLR 120 Query: 136 DPEQQLELNRESVRAPPNRTIFDSDLMDSARLGGPCPPSSNSGISATCYGSGGRMEGPPP 195 DPEQQLELNRESVRAPPNRTIFDSDLMDSARLGGPCPPSSNSGISATCYGSGGRMEGPPP Sbjct: 121 DPEQQLELNRESVRAPPNRTIFDSDLMDSARLGGPCPPSSNSGISATCYGSGGRMEGPPP 180 Query: 196 TYSEVIGHYPGSSFQHQQSSGPPSLLEGTRLHHTHIAPLESAAIWSKEKDKQKGHPL 252 TYSEVIGHYPGSSFQHQQSSGPPSLLEGTRLHHTHIAPLESAAIWSKEKDKQKGHPL Sbjct: 181 TYSEVIGHYPGSSFQHQQSSGPPSLLEGTRLHHTHIAPLESAAIWSKEKDKQKGHPL 237 >gi|4757884 hypothetical protein LOC753 isoform beta 1 [Homo sapiens] Length = 248 Score = 327 bits (838), Expect = 6e-90 Identities = 169/250 (67%), Positives = 190/250 (76%), Gaps = 7/250 (2%) Query: 2 AELEFVQIIIIVVVMMVMVVVITCLLSHYKLSARSFISRHSQGRRREDALSSEGCLWPSE 61 AELEF QIIIIVVV+ VMVVVI CLL+HYK+S RSFI+R +Q RRRED L EGCLWPS+ Sbjct: 3 AELEFAQIIIIVVVVTVMVVVIVCLLNHYKVSTRSFINRPNQSRRREDGLPQEGCLWPSD 62 Query: 62 STVSGNGIPEPQVYAPPRPTDRLAVPPFAQRERFHRFQPTYPYLQHEIDLPPTISLSDGE 121 S G E + PR DR P F QR+RF RFQPTYPY+QHEIDLPPTISLSDGE Sbjct: 63 SAAPRLGASE--IMHAPRSRDRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGE 120 Query: 122 EPPPYQGPCTLQLRDPEQQLELNRESVRAPPNRTIFDSDLMDSARL-GGPCPPSSNSGIS 180 EPPPYQGPCTLQLRDPEQQ+ELNRESVRAPPNRTIFDSDL+D A GGPCPPSSNSGIS Sbjct: 121 EPPPYQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGIS 180 Query: 181 ATCYGSGGRMEGPPPTYSEVIGHYPGSSFQHQQSSGPPSLLEGTRLHHTHIAPLESAAIW 240 A+ S GRMEGPPPTYSEV+GH+PG+SF H Q S + G+RL ES + Sbjct: 181 ASTCSSNGRMEGPPPTYSEVMGHHPGASFLHHQRS---NAHRGSRLQFQQ-NNAESTIVP 236 Query: 241 SKEKDKQKGH 250 K KD++ G+ Sbjct: 237 IKGKDRKPGN 246 >gi|51093708 hypothetical protein LOC753 isoform gamma 1 [Homo sapiens] Length = 269 Score = 327 bits (838), Expect = 6e-90 Identities = 169/250 (67%), Positives = 190/250 (76%), Gaps = 7/250 (2%) Query: 2 AELEFVQIIIIVVVMMVMVVVITCLLSHYKLSARSFISRHSQGRRREDALSSEGCLWPSE 61 AELEF QIIIIVVV+ VMVVVI CLL+HYK+S RSFI+R +Q RRRED L EGCLWPS+ Sbjct: 24 AELEFAQIIIIVVVVTVMVVVIVCLLNHYKVSTRSFINRPNQSRRREDGLPQEGCLWPSD 83 Query: 62 STVSGNGIPEPQVYAPPRPTDRLAVPPFAQRERFHRFQPTYPYLQHEIDLPPTISLSDGE 121 S G E + PR DR P F QR+RF RFQPTYPY+QHEIDLPPTISLSDGE Sbjct: 84 SAAPRLGASE--IMHAPRSRDRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGE 141 Query: 122 EPPPYQGPCTLQLRDPEQQLELNRESVRAPPNRTIFDSDLMDSARL-GGPCPPSSNSGIS 180 EPPPYQGPCTLQLRDPEQQ+ELNRESVRAPPNRTIFDSDL+D A GGPCPPSSNSGIS Sbjct: 142 EPPPYQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGIS 201 Query: 181 ATCYGSGGRMEGPPPTYSEVIGHYPGSSFQHQQSSGPPSLLEGTRLHHTHIAPLESAAIW 240 A+ S GRMEGPPPTYSEV+GH+PG+SF H Q S + G+RL ES + Sbjct: 202 ASTCSSNGRMEGPPPTYSEVMGHHPGASFLHHQRS---NAHRGSRLQFQQ-NNAESTIVP 257 Query: 241 SKEKDKQKGH 250 K KD++ G+ Sbjct: 258 IKGKDRKPGN 267 >gi|41281943 hypothetical protein LOC753 isoform alpha 1 [Homo sapiens] Length = 306 Score = 326 bits (835), Expect = 1e-89 Identities = 168/250 (67%), Positives = 190/250 (76%), Gaps = 7/250 (2%) Query: 2 AELEFVQIIIIVVVMMVMVVVITCLLSHYKLSARSFISRHSQGRRREDALSSEGCLWPSE 61 +ELEF QIIIIVVV+ VMVVVI CLL+HYK+S RSFI+R +Q RRRED L EGCLWPS+ Sbjct: 61 SELEFAQIIIIVVVVTVMVVVIVCLLNHYKVSTRSFINRPNQSRRREDGLPQEGCLWPSD 120 Query: 62 STVSGNGIPEPQVYAPPRPTDRLAVPPFAQRERFHRFQPTYPYLQHEIDLPPTISLSDGE 121 S G E + PR DR P F QR+RF RFQPTYPY+QHEIDLPPTISLSDGE Sbjct: 121 SAAPRLGASE--IMHAPRSRDRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGE 178 Query: 122 EPPPYQGPCTLQLRDPEQQLELNRESVRAPPNRTIFDSDLMDSARL-GGPCPPSSNSGIS 180 EPPPYQGPCTLQLRDPEQQ+ELNRESVRAPPNRTIFDSDL+D A GGPCPPSSNSGIS Sbjct: 179 EPPPYQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGIS 238 Query: 181 ATCYGSGGRMEGPPPTYSEVIGHYPGSSFQHQQSSGPPSLLEGTRLHHTHIAPLESAAIW 240 A+ S GRMEGPPPTYSEV+GH+PG+SF H Q S + G+RL ES + Sbjct: 239 ASTCSSNGRMEGPPPTYSEVMGHHPGASFLHHQRS---NAHRGSRLQFQQ-NNAESTIVP 294 Query: 241 SKEKDKQKGH 250 K KD++ G+ Sbjct: 295 IKGKDRKPGN 304 >gi|41281948 hypothetical protein LOC753 isoform beta 2 [Homo sapiens] Length = 230 Score = 304 bits (778), Expect = 6e-83 Identities = 161/250 (64%), Positives = 181/250 (72%), Gaps = 25/250 (10%) Query: 2 AELEFVQIIIIVVVMMVMVVVITCLLSHYKLSARSFISRHSQGRRREDALSSEGCLWPSE 61 AELEF QIIIIVVV+ VMVVVI CLL+HYK+S RSFI+R +Q RRRED L Sbjct: 3 AELEFAQIIIIVVVVTVMVVVIVCLLNHYKVSTRSFINRPNQSRRREDGL---------- 52 Query: 62 STVSGNGIPEPQVYAPPRPTDRLAVPPFAQRERFHRFQPTYPYLQHEIDLPPTISLSDGE 121 PQ+ PR DR P F QR+RF RFQPTYPY+QHEIDLPPTISLSDGE Sbjct: 53 ----------PQIMHAPRSRDRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGE 102 Query: 122 EPPPYQGPCTLQLRDPEQQLELNRESVRAPPNRTIFDSDLMDSARL-GGPCPPSSNSGIS 180 EPPPYQGPCTLQLRDPEQQ+ELNRESVRAPPNRTIFDSDL+D A GGPCPPSSNSGIS Sbjct: 103 EPPPYQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGIS 162 Query: 181 ATCYGSGGRMEGPPPTYSEVIGHYPGSSFQHQQSSGPPSLLEGTRLHHTHIAPLESAAIW 240 A+ S GRMEGPPPTYSEV+GH+PG+SF H Q S + G+RL ES + Sbjct: 163 ASTCSSNGRMEGPPPTYSEVMGHHPGASFLHHQRS---NAHRGSRLQFQQ-NNAESTIVP 218 Query: 241 SKEKDKQKGH 250 K KD++ G+ Sbjct: 219 IKGKDRKPGN 228 >gi|51093710 hypothetical protein LOC753 isoform gamma 2 [Homo sapiens] Length = 251 Score = 304 bits (778), Expect = 6e-83 Identities = 161/250 (64%), Positives = 181/250 (72%), Gaps = 25/250 (10%) Query: 2 AELEFVQIIIIVVVMMVMVVVITCLLSHYKLSARSFISRHSQGRRREDALSSEGCLWPSE 61 AELEF QIIIIVVV+ VMVVVI CLL+HYK+S RSFI+R +Q RRRED L Sbjct: 24 AELEFAQIIIIVVVVTVMVVVIVCLLNHYKVSTRSFINRPNQSRRREDGL---------- 73 Query: 62 STVSGNGIPEPQVYAPPRPTDRLAVPPFAQRERFHRFQPTYPYLQHEIDLPPTISLSDGE 121 PQ+ PR DR P F QR+RF RFQPTYPY+QHEIDLPPTISLSDGE Sbjct: 74 ----------PQIMHAPRSRDRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGE 123 Query: 122 EPPPYQGPCTLQLRDPEQQLELNRESVRAPPNRTIFDSDLMDSARL-GGPCPPSSNSGIS 180 EPPPYQGPCTLQLRDPEQQ+ELNRESVRAPPNRTIFDSDL+D A GGPCPPSSNSGIS Sbjct: 124 EPPPYQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGIS 183 Query: 181 ATCYGSGGRMEGPPPTYSEVIGHYPGSSFQHQQSSGPPSLLEGTRLHHTHIAPLESAAIW 240 A+ S GRMEGPPPTYSEV+GH+PG+SF H Q S + G+RL ES + Sbjct: 184 ASTCSSNGRMEGPPPTYSEVMGHHPGASFLHHQRS---NAHRGSRLQFQQ-NNAESTIVP 239 Query: 241 SKEKDKQKGH 250 K KD++ G+ Sbjct: 240 IKGKDRKPGN 249 >gi|41281957 hypothetical protein LOC753 isoform alpha 2 [Homo sapiens] Length = 288 Score = 303 bits (775), Expect = 1e-82 Identities = 160/250 (64%), Positives = 181/250 (72%), Gaps = 25/250 (10%) Query: 2 AELEFVQIIIIVVVMMVMVVVITCLLSHYKLSARSFISRHSQGRRREDALSSEGCLWPSE 61 +ELEF QIIIIVVV+ VMVVVI CLL+HYK+S RSFI+R +Q RRRED L Sbjct: 61 SELEFAQIIIIVVVVTVMVVVIVCLLNHYKVSTRSFINRPNQSRRREDGL---------- 110 Query: 62 STVSGNGIPEPQVYAPPRPTDRLAVPPFAQRERFHRFQPTYPYLQHEIDLPPTISLSDGE 121 PQ+ PR DR P F QR+RF RFQPTYPY+QHEIDLPPTISLSDGE Sbjct: 111 ----------PQIMHAPRSRDRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGE 160 Query: 122 EPPPYQGPCTLQLRDPEQQLELNRESVRAPPNRTIFDSDLMDSARL-GGPCPPSSNSGIS 180 EPPPYQGPCTLQLRDPEQQ+ELNRESVRAPPNRTIFDSDL+D A GGPCPPSSNSGIS Sbjct: 161 EPPPYQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGIS 220 Query: 181 ATCYGSGGRMEGPPPTYSEVIGHYPGSSFQHQQSSGPPSLLEGTRLHHTHIAPLESAAIW 240 A+ S GRMEGPPPTYSEV+GH+PG+SF H Q S + G+RL ES + Sbjct: 221 ASTCSSNGRMEGPPPTYSEVMGHHPGASFLHHQRS---NAHRGSRLQFQQ-NNAESTIVP 276 Query: 241 SKEKDKQKGH 250 K KD++ G+ Sbjct: 277 IKGKDRKPGN 286 >gi|148596988 mucoepidermoid carcinoma translocated 1 isoform 3 [Homo sapiens] Length = 650 Score = 40.0 bits (92), Expect = 0.002 Identities = 50/175 (28%), Positives = 68/175 (38%), Gaps = 34/175 (19%) Query: 49 DALSSEGCLWPSESTVSGNGIPEPQVYAPPRPTDRLAVPPFAQRERFHRFQPTYPYLQHE 108 DALS E L + T +G+ P PQ PP P PP +Q+ P P Q Sbjct: 358 DALSLEQQLPYAFFTQAGSQQPPPQPQPPPPP------PPASQQ------PPPPPPPQAP 405 Query: 109 IDLP------PTISLSDGEEPPP--YQGPCTLQLRDPEQ--QLELNRESVRAPPNRTIFD 158 + LP P+ SL+ G +PPP P +L PE Q + + AP + Sbjct: 406 VRLPPGGPLLPSASLTRGPQPPPLAVTVPSSLPQSPPENPGQPSMGIDIASAPALQQYRT 465 Query: 159 SDLMDSARLGGPCPPSSNSGISATCYGSGGRMEGPPPTYSEVIGHYPGSSFQHQQ 213 S S P P SN G S G P ++ +G G ++ QQ Sbjct: 466 S--AGSPANQSPTSPVSNQGFS----------PGSSPQHTSTLGSVFGDAYYEQQ 508 >gi|148596965 mucoepidermoid carcinoma translocated 1 isoform 1 [Homo sapiens] Length = 634 Score = 40.0 bits (92), Expect = 0.002 Identities = 50/175 (28%), Positives = 68/175 (38%), Gaps = 34/175 (19%) Query: 49 DALSSEGCLWPSESTVSGNGIPEPQVYAPPRPTDRLAVPPFAQRERFHRFQPTYPYLQHE 108 DALS E L + T +G+ P PQ PP P PP +Q+ P P Q Sbjct: 342 DALSLEQQLPYAFFTQAGSQQPPPQPQPPPPP------PPASQQ------PPPPPPPQAP 389 Query: 109 IDLP------PTISLSDGEEPPP--YQGPCTLQLRDPEQ--QLELNRESVRAPPNRTIFD 158 + LP P+ SL+ G +PPP P +L PE Q + + AP + Sbjct: 390 VRLPPGGPLLPSASLTRGPQPPPLAVTVPSSLPQSPPENPGQPSMGIDIASAPALQQYRT 449 Query: 159 SDLMDSARLGGPCPPSSNSGISATCYGSGGRMEGPPPTYSEVIGHYPGSSFQHQQ 213 S S P P SN G S G P ++ +G G ++ QQ Sbjct: 450 S--AGSPANQSPTSPVSNQGFS----------PGSSPQHTSTLGSVFGDAYYEQQ 492 >gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapiens] Length = 1124 Score = 39.7 bits (91), Expect = 0.003 Identities = 38/131 (29%), Positives = 49/131 (37%), Gaps = 5/131 (3%) Query: 51 LSSEGCLWPSESTVSGNGIPEPQVYAPPRPTDRLAVPPFAQRERFHRFQPTYPYLQHEID 110 LSS PS S +P P A P P PP A P+ P + Sbjct: 299 LSSSPLATPSPSGTKARPVPPPDNAATPLPATLPPSPPLATPLPLAPPSPSAPPSLQTLP 358 Query: 111 LPPTISLSDGE---EPPPYQGPCTLQLRDPEQ-QLELNRESVRAPPNRTIFDSDLMDSAR 166 PP S PP Q P +LQ P Q L S++APP+ S L + Sbjct: 359 SPPATPPSQAPPSMTTPPMQAPPSLQTIPPIQVPHSLTSPSLQAPPSPLAL-SSLQATTS 417 Query: 167 LGGPCPPSSNS 177 LG P +++S Sbjct: 418 LGSPTLQATHS 428 >gi|217035107 pre-mRNA cleavage factor I, 59 kDa subunit isoform 3 [Homo sapiens] Length = 462 Score = 38.9 bits (89), Expect = 0.004 Identities = 48/193 (24%), Positives = 66/193 (34%), Gaps = 59/193 (30%) Query: 27 LSHYKLSARSFISRHSQGRRREDALSSEGCLWPSESTVSGN------------------- 67 LS ++ AR I + R D S++G PSE+ V + Sbjct: 165 LSQFEAQARKRIPPRAHSRDSSD--SADGRATPSENLVPSSARVDKPPSVLPYFNRPPSA 222 Query: 68 ----GIPEPQVYAPPRPTDRLAVPPFAQRERFHRFQPTYPYLQHEIDLPPTISLSDGEEP 123 G+P P + PP + VPP + P P LPP +++ P Sbjct: 223 LPLMGLPPPPIPPPPPLSSSFGVPPPPPGIHYQHLMPPPP------RLPPHLAV-----P 271 Query: 124 PPYQGPCTLQLRDPEQQLELNRESVRAPPNRTIFDSDLMDSARLGGPCPPSSNSGISATC 183 PP P L L + PPN T+ GP PP + SA Sbjct: 272 PPGAIPPALHL----------NPAFFPPPNATV------------GP-PPDTYMKASAPY 308 Query: 184 YGSGGRMEGPPPT 196 G R GPPP+ Sbjct: 309 NHHGSRDSGPPPS 321 >gi|209862881 pre-mRNA cleavage factor I, 59 kDa subunit isoform 2 [Homo sapiens] Length = 471 Score = 36.2 bits (82), Expect = 0.028 Identities = 35/129 (27%), Positives = 46/129 (35%), Gaps = 34/129 (26%) Query: 68 GIPEPQVYAPPRPTDRLAVPPFAQRERFHRFQPTYPYLQHEIDLPPTISLSDGEEPPPYQ 127 G+P P + PP + VPP + P P LPP +++ PPP Sbjct: 236 GLPPPPIPPPPPLSSSFGVPPPPPGIHYQHLMPPPP------RLPPHLAV-----PPPGA 284 Query: 128 GPCTLQLRDPEQQLELNRESVRAPPNRTIFDSDLMDSARLGGPCPPSSNSGISATCYGSG 187 P L L + PPN T+ GP PP + SA G Sbjct: 285 IPPALHL----------NPAFFPPPNATV------------GP-PPDTYMKASAPYNHHG 321 Query: 188 GRMEGPPPT 196 R GPPP+ Sbjct: 322 SRDSGPPPS 330 >gi|217035102 pre-mRNA cleavage factor I, 59 kDa subunit isoform 1 [Homo sapiens] Length = 514 Score = 36.2 bits (82), Expect = 0.028 Identities = 35/129 (27%), Positives = 46/129 (35%), Gaps = 34/129 (26%) Query: 68 GIPEPQVYAPPRPTDRLAVPPFAQRERFHRFQPTYPYLQHEIDLPPTISLSDGEEPPPYQ 127 G+P P + PP + VPP + P P LPP +++ PPP Sbjct: 279 GLPPPPIPPPPPLSSSFGVPPPPPGIHYQHLMPPPP------RLPPHLAV-----PPPGA 327 Query: 128 GPCTLQLRDPEQQLELNRESVRAPPNRTIFDSDLMDSARLGGPCPPSSNSGISATCYGSG 187 P L L + PPN T+ GP PP + SA G Sbjct: 328 IPPALHL----------NPAFFPPPNATV------------GP-PPDTYMKASAPYNHHG 364 Query: 188 GRMEGPPPT 196 R GPPP+ Sbjct: 365 SRDSGPPPS 373 >gi|163914392 glioma tumor suppressor candidate region gene 1 [Homo sapiens] Length = 1560 Score = 36.2 bits (82), Expect = 0.028 Identities = 44/164 (26%), Positives = 63/164 (38%), Gaps = 40/164 (24%) Query: 69 IPEPQVYAPP-RPTDR---LAVPPFAQRERFH-----RFQPTYP---YLQHEIDLPPTIS 116 +P P PP RP R ++ PP H + PT P +Q+++ +PP S Sbjct: 791 LPSPHPTRPPSRPPSRPQSVSRPP--SEPPLHPCPPPQAPPTLPGIFVIQNQLGVPPPAS 848 Query: 117 LSDGEEPPPYQGPCTLQLRDPEQQLELNRESVRAPPNRTIFDSDLMDSARLGGPCPPSSN 176 P P Q P Q + PE L PP + PPSS Sbjct: 849 NPAPTAPGPPQPPLRPQSQPPEGPL---------PPAPHL---------------PPSST 884 Query: 177 SGISATCYGSGGRMEGPPPTYSEVIGHYPGSSFQHQQSSGPPSL 220 S A+ + R+ P PT S+ +P S H+ + PP+L Sbjct: 885 SSAVASSSETSSRL--PAPTPSDFQLQFPPSQGPHKSPTPPPTL 926 >gi|55750053 atrophin-1 [Homo sapiens] Length = 1190 Score = 35.0 bits (79), Expect = 0.062 Identities = 40/149 (26%), Positives = 51/149 (34%), Gaps = 44/149 (29%) Query: 100 PTYPYLQHEIDLPPTISLSDGEEPPPYQGPCTLQLRDPEQQLELNRESVRAPPNRTIFDS 159 P+YP+ PP SLS +PP Y P P Q + + PP + Sbjct: 406 PSYPH-----SFPPPTSLSVSNQPPKYTQPSL-----PSQAV-----WSQGPPPPPPYGR 450 Query: 160 DLMDSARLGGPCPPSSNSGISATCYGSGGRMEGPPPTYSEVIGHYPGSSFQHQQ------ 213 L +S GP PPS +G + PP + H Q QQ Sbjct: 451 LLANSNAHPGPFPPS-----------TGAQSTAHPPVSTHHHHHQQQQQQQQQQQQQQQQ 499 Query: 214 ------SSGP------PSLLEGTRLHHTH 230 +SGP P LEG HH H Sbjct: 500 QQQHHGNSGPPPPGAFPHPLEGGSSHHAH 528 >gi|55750041 atrophin-1 [Homo sapiens] Length = 1190 Score = 35.0 bits (79), Expect = 0.062 Identities = 40/149 (26%), Positives = 51/149 (34%), Gaps = 44/149 (29%) Query: 100 PTYPYLQHEIDLPPTISLSDGEEPPPYQGPCTLQLRDPEQQLELNRESVRAPPNRTIFDS 159 P+YP+ PP SLS +PP Y P P Q + + PP + Sbjct: 406 PSYPH-----SFPPPTSLSVSNQPPKYTQPSL-----PSQAV-----WSQGPPPPPPYGR 450 Query: 160 DLMDSARLGGPCPPSSNSGISATCYGSGGRMEGPPPTYSEVIGHYPGSSFQHQQ------ 213 L +S GP PPS +G + PP + H Q QQ Sbjct: 451 LLANSNAHPGPFPPS-----------TGAQSTAHPPVSTHHHHHQQQQQQQQQQQQQQQQ 499 Query: 214 ------SSGP------PSLLEGTRLHHTH 230 +SGP P LEG HH H Sbjct: 500 QQQHHGNSGPPPPGAFPHPLEGGSSHHAH 528 >gi|209862845 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4 isoform 1 [Homo sapiens] Length = 964 Score = 34.7 bits (78), Expect = 0.081 Identities = 36/136 (26%), Positives = 48/136 (35%), Gaps = 31/136 (22%) Query: 110 DLPPTISLSDGEEPPPYQGPCTLQLRDPEQQLELNRESVRAPPNRTIFDSDLMDSARLGG 169 D PP L+ GE PP P + R P + ++ R P+ ++S S RLGG Sbjct: 102 DAPPCCRLALGEPPPYGAAPIGIP-RPPPPRPGMHSPPPRPAPSPGTWESQPARSVRLGG 160 Query: 170 P--------------CPPSSNSGISAT------------CYGSGGRMEGPPPT----YSE 199 P CP + IS T +G G + PPP Y E Sbjct: 161 PGGGAGGAGGGRVLECPSIRITSISPTPEPPAALEDNPDAWGDGSPRDYPPPEGFGGYRE 220 Query: 200 VIGHYPGSSFQHQQSS 215 G G+ F S Sbjct: 221 AGGQGGGAFFSPSPGS 236 >gi|27886563 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4 isoform 2 [Homo sapiens] Length = 902 Score = 34.7 bits (78), Expect = 0.081 Identities = 36/136 (26%), Positives = 48/136 (35%), Gaps = 31/136 (22%) Query: 110 DLPPTISLSDGEEPPPYQGPCTLQLRDPEQQLELNRESVRAPPNRTIFDSDLMDSARLGG 169 D PP L+ GE PP P + R P + ++ R P+ ++S S RLGG Sbjct: 39 DAPPCCRLALGEPPPYGAAPIGIP-RPPPPRPGMHSPPPRPAPSPGTWESQPARSVRLGG 97 Query: 170 P--------------CPPSSNSGISAT------------CYGSGGRMEGPPPT----YSE 199 P CP + IS T +G G + PPP Y E Sbjct: 98 PGGGAGGAGGGRVLECPSIRITSISPTPEPPAALEDNPDAWGDGSPRDYPPPEGFGGYRE 157 Query: 200 VIGHYPGSSFQHQQSS 215 G G+ F S Sbjct: 158 AGGQGGGAFFSPSPGS 173 >gi|241982780 programmed cell death 6 interacting protein isoform 2 [Homo sapiens] Length = 873 Score = 34.3 bits (77), Expect = 0.11 Identities = 26/86 (30%), Positives = 34/86 (39%), Gaps = 3/86 (3%) Query: 55 GCLWPSESTVSGNGIPEPQVYAPPRPTDRLAVPPFAQRERFHRFQPTYPYLQHEIDLPPT 114 G P+ S G+ P PQ PP PT P + Q + P Y Y Q+ + PP Sbjct: 785 GTAAPAPSQTPGSA-PPPQAQGPPYPTYP-GYPGYCQMPMPMGYNP-YAYGQYNMPYPPV 841 Query: 115 ISLSDGEEPPPYQGPCTLQLRDPEQQ 140 S G+ P P + P QQ Sbjct: 842 YHQSPGQAPYPGPQQPSYPFPQPPQQ 867 >gi|22027538 programmed cell death 6 interacting protein isoform 1 [Homo sapiens] Length = 868 Score = 34.3 bits (77), Expect = 0.11 Identities = 26/86 (30%), Positives = 34/86 (39%), Gaps = 3/86 (3%) Query: 55 GCLWPSESTVSGNGIPEPQVYAPPRPTDRLAVPPFAQRERFHRFQPTYPYLQHEIDLPPT 114 G P+ S G+ P PQ PP PT P + Q + P Y Y Q+ + PP Sbjct: 780 GTAAPAPSQTPGSA-PPPQAQGPPYPTYP-GYPGYCQMPMPMGYNP-YAYGQYNMPYPPV 836 Query: 115 ISLSDGEEPPPYQGPCTLQLRDPEQQ 140 S G+ P P + P QQ Sbjct: 837 YHQSPGQAPYPGPQQPSYPFPQPPQQ 862 >gi|4502523 calcium channel, voltage-dependent, N type, alpha 1B subunit [Homo sapiens] Length = 2339 Score = 34.3 bits (77), Expect = 0.11 Identities = 38/148 (25%), Positives = 60/148 (40%), Gaps = 8/148 (5%) Query: 91 QRERFHRFQPTYPYLQHEIDLPPTISLSDGEEPPPYQGPCTLQLRDPEQQLELNRESVRA 150 +R+R R P L ++D P+ ++ G PP +GP + R+ E++ E R R Sbjct: 2059 RRDRKQRSLEKGPSLSADMDGAPSSAVGPGL--PPGEGPTGCR-RERERRQERGRSQERR 2115 Query: 151 PPNRTIFDSDLMDSA-RLGGPCPPSSNSGISA-TCYGSGGRMEGPPPTYSEVIGHYPGSS 208 P+ + + S R GG PP +S+ + G+ GP P S G GS Sbjct: 2116 QPSSSSSEKQRFYSCDRFGGREPPKPKPSLSSHPTSPTAGQEPGPHPQGS---GSVNGSP 2172 Query: 209 FQHQQSSGPPSLLEGTRLHHTHIAPLES 236 + P +L T + P S Sbjct: 2173 LLSTSGASTPGRGGRRQLPQTPLTPRPS 2200 >gi|55953100 tubby like protein 4 isoform 1 [Homo sapiens] Length = 1543 Score = 34.3 bits (77), Expect = 0.11 Identities = 21/49 (42%), Positives = 23/49 (46%) Query: 65 SGNGIPEPQVYAPPRPTDRLAVPPFAQRERFHRFQPTYPYLQHEIDLPP 113 S N P P V AP P D L+ FAQ+E QP YP LPP Sbjct: 1194 SYNNPPLPGVQAPCSPKDALSPTQFAQQEPAVVLQPLYPPSLSYCTLPP 1242 >gi|154800453 tastin isoform 1 [Homo sapiens] Length = 778 Score = 33.5 bits (75), Expect = 0.18 Identities = 42/165 (25%), Positives = 63/165 (38%), Gaps = 32/165 (19%) Query: 71 EPQVYAPPRPTDRLAVPPFAQRERFHRFQPTYPY--LQHEIDLPPTISLSDGEEPPPYQG 128 EPQ P P PP E F R +P P LQ ++++P + EP P + Sbjct: 511 EPQPCPPAEPG-----PP----EAFCRSEPEIPEPSLQEQLEVPEPYPPA---EPRPLES 558 Query: 129 PCTLQLRDPE----QQLELNRESVRAPPNRT---------IFDSDLMDSARLGGPCPPSS 175 C + PE +QLE+ A P I +S + + PCPP+ Sbjct: 559 CCRSEPEIPESSRQEQLEVPEPCPPAEPRPLESYCRIEPEIPESSRQEQLEVPEPCPPAE 618 Query: 176 NSGISATCYGSGGRMEGPPPTYSEVIGHYPGSSFQHQ--QSSGPP 218 + + G G P P +G + +H+ +SS PP Sbjct: 619 PGPLQPSTQGQSG---PPGPCPRVELGASEPCTLEHRSLESSLPP 660 >gi|169234649 smoothelin-like 2 isoform 2 [Homo sapiens] Length = 317 Score = 33.1 bits (74), Expect = 0.24 Identities = 43/166 (25%), Positives = 56/166 (33%), Gaps = 26/166 (15%) Query: 110 DLPPTISLSDGEEPPPYQGPCTLQLRDPEQQL-ELNRESVRAPPNRTIFDSDLMDSARLG 168 D PP I+ + PP P +L LR P Q + + R S R + M +A LG Sbjct: 22 DGPPEIAQNFSAPDPPRPRPVSLSLRLPHQPVTAITRVSDRFSGETSAAALSPMSAATLG 81 Query: 169 G-------------PCPPSSNSGISATCYGSG-------GRMEGPP---PTYSEVIGHYP 205 G P P NS + + SG PP P S V P Sbjct: 82 GLNPSPSEVITPWTPSPSEKNSSFTWSVPSSGYGAVTASKHSNSPPLVTPPQSPVSPQPP 141 Query: 206 GSSFQHQQSSGPPSLLEGTRLHHTHIAPLESAAI--WSKEKDKQKG 249 + H+Q L+ L T A A W +E KG Sbjct: 142 AITQVHRQGERRRELVRSQTLPRTSEAQARKALFEKWEQETAAGKG 187 >gi|169234647 smoothelin-like 2 isoform 1 [Homo sapiens] Length = 461 Score = 33.1 bits (74), Expect = 0.24 Identities = 43/166 (25%), Positives = 56/166 (33%), Gaps = 26/166 (15%) Query: 110 DLPPTISLSDGEEPPPYQGPCTLQLRDPEQQL-ELNRESVRAPPNRTIFDSDLMDSARLG 168 D PP I+ + PP P +L LR P Q + + R S R + M +A LG Sbjct: 166 DGPPEIAQNFSAPDPPRPRPVSLSLRLPHQPVTAITRVSDRFSGETSAAALSPMSAATLG 225 Query: 169 G-------------PCPPSSNSGISATCYGSG-------GRMEGPP---PTYSEVIGHYP 205 G P P NS + + SG PP P S V P Sbjct: 226 GLNPSPSEVITPWTPSPSEKNSSFTWSVPSSGYGAVTASKHSNSPPLVTPPQSPVSPQPP 285 Query: 206 GSSFQHQQSSGPPSLLEGTRLHHTHIAPLESAAI--WSKEKDKQKG 249 + H+Q L+ L T A A W +E KG Sbjct: 286 AITQVHRQGERRRELVRSQTLPRTSEAQARKALFEKWEQETAAGKG 331 >gi|206597543 hypothetical protein LOC118461 isoform 1 [Homo sapiens] Length = 1435 Score = 32.3 bits (72), Expect = 0.40 Identities = 22/90 (24%), Positives = 38/90 (42%), Gaps = 3/90 (3%) Query: 113 PTISLSDGE---EPPPYQGPCTLQLRDPEQQLELNRESVRAPPNRTIFDSDLMDSARLGG 169 PTI+L +G+ +PPP+Q + + P + PP R + S+ +S G Sbjct: 1002 PTIALPEGDIEDQPPPWQPENCWEEQTPGFKSHFLSTPRAGPPGRRLVPSERANSPNPGS 1061 Query: 170 PCPPSSNSGISATCYGSGGRMEGPPPTYSE 199 P S+ S ++ + + G P E Sbjct: 1062 PGESSACSPAASNIWEESSQAPGGPELLPE 1091 >gi|116256464 hypothetical protein LOC343990 [Homo sapiens] Length = 962 Score = 32.3 bits (72), Expect = 0.40 Identities = 36/119 (30%), Positives = 43/119 (36%), Gaps = 21/119 (17%) Query: 70 PEPQVYAPPRPTDRLAVPPFAQRERFHRFQPTYPYLQHEIDLPPTISLSDGEEP--PPYQ 127 PEP PP P PP R R R LQH L T S+ +G P P Sbjct: 291 PEP---GPPAPLP----PPGGARARRAR-------LQHSSAL--TASVEEGGVPGEDPSS 334 Query: 128 GPCTLQLRDPEQQLELNRE---SVRAPPNRTIFDSDLMDSARLGGPCPPSSNSGISATC 183 P T +L +PE L E PPN A GPC P+++ C Sbjct: 335 RPATPELAEPESAPTLRVEPPSPPEGPPNPGPDGGKQDGEAPPAGPCAPATDKAEEVVC 393 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.316 0.135 0.415 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 13,077,765 Number of Sequences: 37866 Number of extensions: 759805 Number of successful extensions: 2843 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 24 Number of HSP's successfully gapped in prelim test: 98 Number of HSP's that attempted gapping in prelim test: 2704 Number of HSP's gapped (non-prelim): 192 length of query: 252 length of database: 18,247,518 effective HSP length: 100 effective length of query: 152 effective length of database: 14,460,918 effective search space: 2198059536 effective search space used: 2198059536 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.