Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: MCTP2 Sequence: fasta or formatted (823aa) NCBI GI: 227496489
Description:

multiple C2 domains, transmembrane 2 isoform 2

Referenced in:

ER, Golgi, and the Secretory Pathway

Other entries for this name:
alt prot [878aa] multiple C2 domains, transmembrane 2 isoform 1
alt prot [306aa] multiple C2 domains, transmembrane 2 isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.6         38           3
 C cysteine            1.8         15           1
 D aspartate           6.6         54           2
 E glutamate           6.1         50           3
 F phenylalanine       3.6         30           1
 G glycine             4.4         36           2
 H histidine           1.6         13           2
 I isoleucine          5.3         44           2
 K lysine              8.4         69           3
 L leucine            13.1        108           2
 M methionine          1.5         12           1
 N asparagine          4.5         37           2
 P proline             4.9         40           2
 Q glutamine           3.6         30           1
 R arginine            5.3         44           3
 S serine             10.0         82           5
 T threonine           4.3         35           2
 V valine              6.6         54           2
 W tryptophan          1.5         12           1
 Y tyrosine            2.4         20           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   multiple C2 domains, transmembrane 2 isoform 2 [Hom... 
MCTP2                 0.979   multiple C2 domains, transmembrane 2 isoform 1 [Hom...
MCTP2                 0.340   multiple C2 domains, transmembrane 2 isoform 3 [Hom...
MCTP1                 0.297   multiple C2 domains, transmembrane 1 isoform L [Hom...
MCTP1                 0.295   multiple C2 domains, transmembrane 1 isoform S [Homo...
ESYT1                 0.048   extended synaptotagmin-like protein 1 
ITSN2                 0.035   intersectin 2 isoform 3 
ITSN2                 0.035   intersectin 2 isoform 1 
ESYT2                 0.034   family with sequence similarity 62 (C2 domain contai...
ESYT3                 0.030   family with sequence similarity 62 (C2 domain conta...
DOC2B                 0.028   double C2-like domains, beta 
ITSN1                 0.026   intersectin 1 isoform ITSN-l 
RPH3A                 0.026   rabphilin 3A homolog isoform 1 
RPH3A                 0.026   rabphilin 3A homolog isoform 2 
UNC13C                0.025   unc-13 homolog C 
SYT7                  0.025   synaptotagmin VII 
NEDD4L                0.025   neural precursor cell expressed, developmentally dow...
NEDD4L                0.025   neural precursor cell expressed, developmentally do...
NEDD4L                0.025   neural precursor cell expressed, developmentally do...
NEDD4L                0.025   neural precursor cell expressed, developmentally do...
UNC13A                0.024   unc-13 homolog A 
DOC2A                 0.023   double C2-like domains, alpha 
UNC13B                0.023   UNC13 (C. elegans)-like 
SYT6                  0.023   synaptotagmin VI 
NEDD4                 0.022   neural precursor cell expressed, developmentally do...
PRKCB                 0.021   protein kinase C, beta isoform 1 
PRKCB                 0.021   protein kinase C, beta isoform 2 
PRKCG                 0.021   protein kinase C, gamma 
PRKCA                 0.020   protein kinase C, alpha 
LOC100132214          0.020   PREDICTED: similar to calcium-promoted Ras inactiva...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press