Guide to the Human Genome
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Name: C7 Sequence: fasta or formatted (843aa) NCBI GI: 45580688
Description:

complement component 7 precursor

Referenced in:

Complement
Additional Genes in Development

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.5         38           2
 C cysteine            6.6         56           1
 D aspartate           3.6         30           1
 E glutamate           8.2         69           3
 F phenylalanine       4.2         35           2
 G glycine             8.5         72           3
 H histidine           2.0         17           1
 I isoleucine          2.5         21           1
 K lysine              5.7         48           2
 L leucine             7.2         61           2
 M methionine          1.1          9           1
 N asparagine          4.6         39           3
 P proline             5.3         45           3
 Q glutamine           4.4         37           1
 R arginine            5.0         42           3
 S serine             10.1         85           6
 T threonine           4.9         41           2
 V valine              6.5         55           2
 W tryptophan          1.7         14           1
 Y tyrosine            3.4         29           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   complement component 7 precursor 
C6                    0.243   complement component 6 precursor 
C6                    0.243   complement component 6 precursor 
C8A                   0.141   complement component 8, alpha polypeptide precursor [...
C8B                   0.125   complement component 8, beta polypeptide preproprotei...
C9                    0.108   complement component 9 precursor 
SVEP1                 0.032   polydom 
CR2                   0.028   complement component (3d/Epstein Barr virus) recepto...
CR2                   0.028   complement component (3d/Epstein Barr virus) recepto...
CR1                   0.027   complement receptor 1 isoform S precursor 
CR1                   0.027   complement receptor 1 isoform F precursor 
SEMA5A                0.024   semaphorin 5A 
CFH                   0.022   complement factor H isoform a precursor 
PRF1                  0.021   perforin 1 precursor 
PRF1                  0.021   perforin 1 precursor 
C4BPA                 0.020   complement component 4 binding protein, alpha chain p...
HMCN1                 0.020   hemicentin 1 
THBS1                 0.020   thrombospondin 1 precursor 
ADAMTS10              0.019   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS14              0.019   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS14              0.019   ADAM metallopeptidase with thrombospondin type 1 mo...
UNC5B                 0.019   unc-5 homolog B 
THBS2                 0.019   thrombospondin 2 precursor 
CSMD1                 0.019   CUB and Sushi multiple domains 1 
SSPO                  0.019   SCO-spondin 
SEZ6L                 0.018   seizure related 6 homolog (mouse)-like precursor [Ho...
ADAMTS16              0.018   ADAM metallopeptidase with thrombospondin type 1 mo...
CSMD2                 0.018   CUB and Sushi multiple domains 2 
ADAMTS17              0.018   ADAM metallopeptidase with thrombospondin type 1 mo...
CFH                   0.018   complement factor H isoform b precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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