BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|40217617 potassium channel tetramerisation domain containing 1 isoform a [Homo sapiens] (257 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|218505694 potassium channel tetramerisation domain containing... 525 e-149 gi|209969708 potassium channel tetramerisation domain containing... 525 e-149 gi|40217617 potassium channel tetramerisation domain containing ... 525 e-149 gi|194018443 potassium channel tetramerisation domain containing... 425 e-119 gi|194018441 potassium channel tetramerisation domain containing... 425 e-119 gi|194018439 potassium channel tetramerisation domain containing... 352 2e-97 gi|189571693 potassium channel tetramerisation domain containing... 110 2e-24 gi|189571691 potassium channel tetramerisation domain containing... 110 2e-24 gi|71143104 potassium channel tetramerisation domain containing ... 102 4e-22 gi|146198864 potassium channel tetramerisation domain containing... 88 6e-18 gi|40807368 potassium channel regulator isoform 2 [Homo sapiens] 76 3e-14 gi|27734697 potassium channel regulator isoform 1 [Homo sapiens] 76 3e-14 gi|19923973 potassium channel tetramerisation domain containing ... 72 5e-13 gi|55926200 potassium channel tetramerisation domain containing ... 70 2e-12 gi|38198663 potassium channel tetramerisation domain containing ... 69 3e-12 gi|155369221 potassium channel tetramerisation domain containing... 68 7e-12 gi|23308551 potassium channel tetramerisation domain containing ... 62 4e-10 gi|142356950 potassium channel tetramerisation domain containing... 61 8e-10 gi|51036594 potassium channel tetramerisation domain containing ... 58 9e-09 gi|13994353 potassium channel tetramerisation domain containing ... 57 2e-08 gi|45387953 potassium channel tetramerization domain containing ... 54 1e-07 gi|223005950 SH3KBP1 binding protein 1 [Homo sapiens] 53 2e-07 gi|10863937 tumor necrosis factor, alpha-induced protein 1 [Homo... 52 4e-07 gi|30578412 potassium channel tetramerisation domain containing ... 51 1e-06 gi|169234778 potassium channel tetramerisation domain containing... 50 1e-06 gi|27436981 potassium voltage-gated channel, Shal-related subfam... 49 3e-06 gi|25952108 potassium voltage-gated channel delayed-rectifier pr... 49 4e-06 gi|53829365 potassium channel tetramerisation domain containing ... 49 4e-06 gi|9789987 potassium voltage-gated channel, Shal-related subfami... 47 1e-05 gi|46255026 potassium channel tetramerisation domain containing ... 47 2e-05 >gi|218505694 potassium channel tetramerisation domain containing 1 isoform b [Homo sapiens] Length = 865 Score = 525 bits (1352), Expect = e-149 Identities = 257/257 (100%), Positives = 257/257 (100%) Query: 1 MSRPLITRSPASPLNNQGIPTPAQLTKSNAPVHIDVGGHMYTSSLATLTKYPESRIGRLF 60 MSRPLITRSPASPLNNQGIPTPAQLTKSNAPVHIDVGGHMYTSSLATLTKYPESRIGRLF Sbjct: 609 MSRPLITRSPASPLNNQGIPTPAQLTKSNAPVHIDVGGHMYTSSLATLTKYPESRIGRLF 668 Query: 61 DGTEPIVLDSLKQHYFIDRDGQMFRYILNFLRTSKLLIPDDFKDYTLLYEEAKYFQLQPM 120 DGTEPIVLDSLKQHYFIDRDGQMFRYILNFLRTSKLLIPDDFKDYTLLYEEAKYFQLQPM Sbjct: 669 DGTEPIVLDSLKQHYFIDRDGQMFRYILNFLRTSKLLIPDDFKDYTLLYEEAKYFQLQPM 728 Query: 121 LLEMERWKQDRETGRFSRPCECLVVRVAPDLGERITLSGDKSLIEEVFPEIGDVMCNSVN 180 LLEMERWKQDRETGRFSRPCECLVVRVAPDLGERITLSGDKSLIEEVFPEIGDVMCNSVN Sbjct: 729 LLEMERWKQDRETGRFSRPCECLVVRVAPDLGERITLSGDKSLIEEVFPEIGDVMCNSVN 788 Query: 181 AGWNHDSTHVIRFPLNGYCHLNSVQVLERLQQRGFEIVGSCGGGVDSSQFSEYVLRRELR 240 AGWNHDSTHVIRFPLNGYCHLNSVQVLERLQQRGFEIVGSCGGGVDSSQFSEYVLRRELR Sbjct: 789 AGWNHDSTHVIRFPLNGYCHLNSVQVLERLQQRGFEIVGSCGGGVDSSQFSEYVLRRELR 848 Query: 241 RTPRVPSVIRIKQEPLD 257 RTPRVPSVIRIKQEPLD Sbjct: 849 RTPRVPSVIRIKQEPLD 865 >gi|209969708 potassium channel tetramerisation domain containing 1 isoform a [Homo sapiens] Length = 257 Score = 525 bits (1352), Expect = e-149 Identities = 257/257 (100%), Positives = 257/257 (100%) Query: 1 MSRPLITRSPASPLNNQGIPTPAQLTKSNAPVHIDVGGHMYTSSLATLTKYPESRIGRLF 60 MSRPLITRSPASPLNNQGIPTPAQLTKSNAPVHIDVGGHMYTSSLATLTKYPESRIGRLF Sbjct: 1 MSRPLITRSPASPLNNQGIPTPAQLTKSNAPVHIDVGGHMYTSSLATLTKYPESRIGRLF 60 Query: 61 DGTEPIVLDSLKQHYFIDRDGQMFRYILNFLRTSKLLIPDDFKDYTLLYEEAKYFQLQPM 120 DGTEPIVLDSLKQHYFIDRDGQMFRYILNFLRTSKLLIPDDFKDYTLLYEEAKYFQLQPM Sbjct: 61 DGTEPIVLDSLKQHYFIDRDGQMFRYILNFLRTSKLLIPDDFKDYTLLYEEAKYFQLQPM 120 Query: 121 LLEMERWKQDRETGRFSRPCECLVVRVAPDLGERITLSGDKSLIEEVFPEIGDVMCNSVN 180 LLEMERWKQDRETGRFSRPCECLVVRVAPDLGERITLSGDKSLIEEVFPEIGDVMCNSVN Sbjct: 121 LLEMERWKQDRETGRFSRPCECLVVRVAPDLGERITLSGDKSLIEEVFPEIGDVMCNSVN 180 Query: 181 AGWNHDSTHVIRFPLNGYCHLNSVQVLERLQQRGFEIVGSCGGGVDSSQFSEYVLRRELR 240 AGWNHDSTHVIRFPLNGYCHLNSVQVLERLQQRGFEIVGSCGGGVDSSQFSEYVLRRELR Sbjct: 181 AGWNHDSTHVIRFPLNGYCHLNSVQVLERLQQRGFEIVGSCGGGVDSSQFSEYVLRRELR 240 Query: 241 RTPRVPSVIRIKQEPLD 257 RTPRVPSVIRIKQEPLD Sbjct: 241 RTPRVPSVIRIKQEPLD 257 >gi|40217617 potassium channel tetramerisation domain containing 1 isoform a [Homo sapiens] Length = 257 Score = 525 bits (1352), Expect = e-149 Identities = 257/257 (100%), Positives = 257/257 (100%) Query: 1 MSRPLITRSPASPLNNQGIPTPAQLTKSNAPVHIDVGGHMYTSSLATLTKYPESRIGRLF 60 MSRPLITRSPASPLNNQGIPTPAQLTKSNAPVHIDVGGHMYTSSLATLTKYPESRIGRLF Sbjct: 1 MSRPLITRSPASPLNNQGIPTPAQLTKSNAPVHIDVGGHMYTSSLATLTKYPESRIGRLF 60 Query: 61 DGTEPIVLDSLKQHYFIDRDGQMFRYILNFLRTSKLLIPDDFKDYTLLYEEAKYFQLQPM 120 DGTEPIVLDSLKQHYFIDRDGQMFRYILNFLRTSKLLIPDDFKDYTLLYEEAKYFQLQPM Sbjct: 61 DGTEPIVLDSLKQHYFIDRDGQMFRYILNFLRTSKLLIPDDFKDYTLLYEEAKYFQLQPM 120 Query: 121 LLEMERWKQDRETGRFSRPCECLVVRVAPDLGERITLSGDKSLIEEVFPEIGDVMCNSVN 180 LLEMERWKQDRETGRFSRPCECLVVRVAPDLGERITLSGDKSLIEEVFPEIGDVMCNSVN Sbjct: 121 LLEMERWKQDRETGRFSRPCECLVVRVAPDLGERITLSGDKSLIEEVFPEIGDVMCNSVN 180 Query: 181 AGWNHDSTHVIRFPLNGYCHLNSVQVLERLQQRGFEIVGSCGGGVDSSQFSEYVLRRELR 240 AGWNHDSTHVIRFPLNGYCHLNSVQVLERLQQRGFEIVGSCGGGVDSSQFSEYVLRRELR Sbjct: 181 AGWNHDSTHVIRFPLNGYCHLNSVQVLERLQQRGFEIVGSCGGGVDSSQFSEYVLRRELR 240 Query: 241 RTPRVPSVIRIKQEPLD 257 RTPRVPSVIRIKQEPLD Sbjct: 241 RTPRVPSVIRIKQEPLD 257 >gi|194018443 potassium channel tetramerisation domain containing 15 isoform 2 [Homo sapiens] Length = 283 Score = 425 bits (1093), Expect = e-119 Identities = 205/257 (79%), Positives = 228/257 (88%) Query: 1 MSRPLITRSPASPLNNQGIPTPAQLTKSNAPVHIDVGGHMYTSSLATLTKYPESRIGRLF 60 MSR +TRSP SPL QGIP PAQLTKSNAPVHIDVGGHMYTSSLATLTKYP+SRI RLF Sbjct: 27 MSRLSLTRSPVSPLAAQGIPLPAQLTKSNAPVHIDVGGHMYTSSLATLTKYPDSRISRLF 86 Query: 61 DGTEPIVLDSLKQHYFIDRDGQMFRYILNFLRTSKLLIPDDFKDYTLLYEEAKYFQLQPM 120 +GTEPIVLDSLKQHYFIDRDG++FRY+L+FLRTSKLL+PDDFKD++LLYEEA+Y+QLQPM Sbjct: 87 NGTEPIVLDSLKQHYFIDRDGEIFRYVLSFLRTSKLLLPDDFKDFSLLYEEARYYQLQPM 146 Query: 121 LLEMERWKQDRETGRFSRPCECLVVRVAPDLGERITLSGDKSLIEEVFPEIGDVMCNSVN 180 + E+ERW+Q++E R SR C+CLVVRV PDLGERI LSG+K+LIEEVFPE GDVMCNSVN Sbjct: 147 VRELERWQQEQEQRRRSRACDCLVVRVTPDLGERIALSGEKALIEEVFPETGDVMCNSVN 206 Query: 181 AGWNHDSTHVIRFPLNGYCHLNSVQVLERLQQRGFEIVGSCGGGVDSSQFSEYVLRRELR 240 AGWN D THVIRFPLNGYC LNSVQVLERL QRGF + SCGGGVDSSQFSEYVL RE R Sbjct: 207 AGWNQDPTHVIRFPLNGYCRLNSVQVLERLFQRGFSVAASCGGGVDSSQFSEYVLCREER 266 Query: 241 RTPRVPSVIRIKQEPLD 257 R P+ +RIKQEPLD Sbjct: 267 RPQPTPTAVRIKQEPLD 283 >gi|194018441 potassium channel tetramerisation domain containing 15 isoform 2 [Homo sapiens] Length = 283 Score = 425 bits (1093), Expect = e-119 Identities = 205/257 (79%), Positives = 228/257 (88%) Query: 1 MSRPLITRSPASPLNNQGIPTPAQLTKSNAPVHIDVGGHMYTSSLATLTKYPESRIGRLF 60 MSR +TRSP SPL QGIP PAQLTKSNAPVHIDVGGHMYTSSLATLTKYP+SRI RLF Sbjct: 27 MSRLSLTRSPVSPLAAQGIPLPAQLTKSNAPVHIDVGGHMYTSSLATLTKYPDSRISRLF 86 Query: 61 DGTEPIVLDSLKQHYFIDRDGQMFRYILNFLRTSKLLIPDDFKDYTLLYEEAKYFQLQPM 120 +GTEPIVLDSLKQHYFIDRDG++FRY+L+FLRTSKLL+PDDFKD++LLYEEA+Y+QLQPM Sbjct: 87 NGTEPIVLDSLKQHYFIDRDGEIFRYVLSFLRTSKLLLPDDFKDFSLLYEEARYYQLQPM 146 Query: 121 LLEMERWKQDRETGRFSRPCECLVVRVAPDLGERITLSGDKSLIEEVFPEIGDVMCNSVN 180 + E+ERW+Q++E R SR C+CLVVRV PDLGERI LSG+K+LIEEVFPE GDVMCNSVN Sbjct: 147 VRELERWQQEQEQRRRSRACDCLVVRVTPDLGERIALSGEKALIEEVFPETGDVMCNSVN 206 Query: 181 AGWNHDSTHVIRFPLNGYCHLNSVQVLERLQQRGFEIVGSCGGGVDSSQFSEYVLRRELR 240 AGWN D THVIRFPLNGYC LNSVQVLERL QRGF + SCGGGVDSSQFSEYVL RE R Sbjct: 207 AGWNQDPTHVIRFPLNGYCRLNSVQVLERLFQRGFSVAASCGGGVDSSQFSEYVLCREER 266 Query: 241 RTPRVPSVIRIKQEPLD 257 R P+ +RIKQEPLD Sbjct: 267 RPQPTPTAVRIKQEPLD 283 >gi|194018439 potassium channel tetramerisation domain containing 15 isoform 1 [Homo sapiens] Length = 234 Score = 352 bits (903), Expect = 2e-97 Identities = 167/205 (81%), Positives = 187/205 (91%) Query: 1 MSRPLITRSPASPLNNQGIPTPAQLTKSNAPVHIDVGGHMYTSSLATLTKYPESRIGRLF 60 MSR +TRSP SPL QGIP PAQLTKSNAPVHIDVGGHMYTSSLATLTKYP+SRI RLF Sbjct: 27 MSRLSLTRSPVSPLAAQGIPLPAQLTKSNAPVHIDVGGHMYTSSLATLTKYPDSRISRLF 86 Query: 61 DGTEPIVLDSLKQHYFIDRDGQMFRYILNFLRTSKLLIPDDFKDYTLLYEEAKYFQLQPM 120 +GTEPIVLDSLKQHYFIDRDG++FRY+L+FLRTSKLL+PDDFKD++LLYEEA+Y+QLQPM Sbjct: 87 NGTEPIVLDSLKQHYFIDRDGEIFRYVLSFLRTSKLLLPDDFKDFSLLYEEARYYQLQPM 146 Query: 121 LLEMERWKQDRETGRFSRPCECLVVRVAPDLGERITLSGDKSLIEEVFPEIGDVMCNSVN 180 + E+ERW+Q++E R SR C+CLVVRV PDLGERI LSG+K+LIEEVFPE GDVMCNSVN Sbjct: 147 VRELERWQQEQEQRRRSRACDCLVVRVTPDLGERIALSGEKALIEEVFPETGDVMCNSVN 206 Query: 181 AGWNHDSTHVIRFPLNGYCHLNSVQ 205 AGWN D THVIRFPLNGYC LNSVQ Sbjct: 207 AGWNQDPTHVIRFPLNGYCRLNSVQ 231 >gi|189571693 potassium channel tetramerisation domain containing 6 [Homo sapiens] Length = 237 Score = 110 bits (274), Expect = 2e-24 Identities = 49/91 (53%), Positives = 72/91 (79%), Gaps = 1/91 (1%) Query: 31 PVHIDVGGHMYTSSLATLTKYPESRIGRLFDGTEPIVLDSLKQHYFIDRDGQMFRYILNF 90 PV ++VGGH+YT+SL TLT+YP+S +G +F G P D + +YFIDRDG +FRY+LNF Sbjct: 13 PVTLNVGGHLYTTSLTTLTRYPDSMLGAMFGGDFPTARDP-QGNYFIDRDGPLFRYVLNF 71 Query: 91 LRTSKLLIPDDFKDYTLLYEEAKYFQLQPML 121 LRTS+L +P DFK++ LL +EA ++Q++P++ Sbjct: 72 LRTSELTLPLDFKEFDLLRKEADFYQIEPLI 102 >gi|189571691 potassium channel tetramerisation domain containing 6 [Homo sapiens] Length = 237 Score = 110 bits (274), Expect = 2e-24 Identities = 49/91 (53%), Positives = 72/91 (79%), Gaps = 1/91 (1%) Query: 31 PVHIDVGGHMYTSSLATLTKYPESRIGRLFDGTEPIVLDSLKQHYFIDRDGQMFRYILNF 90 PV ++VGGH+YT+SL TLT+YP+S +G +F G P D + +YFIDRDG +FRY+LNF Sbjct: 13 PVTLNVGGHLYTTSLTTLTRYPDSMLGAMFGGDFPTARDP-QGNYFIDRDGPLFRYVLNF 71 Query: 91 LRTSKLLIPDDFKDYTLLYEEAKYFQLQPML 121 LRTS+L +P DFK++ LL +EA ++Q++P++ Sbjct: 72 LRTSELTLPLDFKEFDLLRKEADFYQIEPLI 102 >gi|71143104 potassium channel tetramerisation domain containing 21 [Homo sapiens] Length = 260 Score = 102 bits (253), Expect = 4e-22 Identities = 48/91 (52%), Positives = 70/91 (76%), Gaps = 1/91 (1%) Query: 31 PVHIDVGGHMYTSSLATLTKYPESRIGRLFDGTEPIVLDSLKQHYFIDRDGQMFRYILNF 90 P+ ++VGG +YT+SLATLT +P+S +G +F G P DS + + FIDRDG++FRYILNF Sbjct: 4 PITLNVGGKLYTTSLATLTSFPDSMLGAMFSGKMPTKRDS-QGNCFIDRDGKVFRYILNF 62 Query: 91 LRTSKLLIPDDFKDYTLLYEEAKYFQLQPML 121 LRTS L +P+DF++ LL EA ++Q+QP++ Sbjct: 63 LRTSHLDLPEDFQEMGLLRREADFYQVQPLI 93 >gi|146198864 potassium channel tetramerisation domain containing 4 [Homo sapiens] Length = 259 Score = 88.2 bits (217), Expect = 6e-18 Identities = 43/103 (41%), Positives = 73/103 (70%), Gaps = 2/103 (1%) Query: 34 IDVGGHMYTSSLATLTKYPESRIGRLFDGTEPIVLDSLKQHYFIDRDGQMFRYILNFLRT 93 ++VGG++Y + TLTKYP++ + + +G D+ HYFIDRDG +FR++LNFLR Sbjct: 37 LNVGGYLYITQKQTLTKYPDTFLEGIVNGKILCPFDA-DGHYFIDRDGLLFRHVLNFLRN 95 Query: 94 SKLLIPDDFKDYTLLYEEAKYFQLQPMLLEME-RWKQDRETGR 135 +LL+P+ F++ LL +EA++FQL+ + E++ RW++++ T R Sbjct: 96 GELLLPEGFRENQLLAQEAEFFQLKGLAEEVKSRWEKEQLTPR 138 >gi|40807368 potassium channel regulator isoform 2 [Homo sapiens] Length = 229 Score = 76.3 bits (186), Expect = 3e-14 Identities = 34/90 (37%), Positives = 60/90 (66%), Gaps = 1/90 (1%) Query: 32 VHIDVGGHMYTSSLATLTKYPESRIGRLFDGTEPIVLDSLKQHYFIDRDGQMFRYILNFL 91 V ++VGG ++T+ +T+ ++P SR+ R+ DG + + F+DRDG +F +IL+FL Sbjct: 7 VTLNVGGKIFTTRFSTIKQFPASRLARMLDGRDQ-EFKMVGGQIFVDRDGDLFSFILDFL 65 Query: 92 RTSKLLIPDDFKDYTLLYEEAKYFQLQPML 121 RT +LL+P +F DY L EA +++L+ ++ Sbjct: 66 RTHQLLLPTEFSDYLRLQREALFYELRSLV 95 >gi|27734697 potassium channel regulator isoform 1 [Homo sapiens] Length = 272 Score = 76.3 bits (186), Expect = 3e-14 Identities = 34/90 (37%), Positives = 60/90 (66%), Gaps = 1/90 (1%) Query: 32 VHIDVGGHMYTSSLATLTKYPESRIGRLFDGTEPIVLDSLKQHYFIDRDGQMFRYILNFL 91 V ++VGG ++T+ +T+ ++P SR+ R+ DG + + F+DRDG +F +IL+FL Sbjct: 7 VTLNVGGKIFTTRFSTIKQFPASRLARMLDGRDQ-EFKMVGGQIFVDRDGDLFSFILDFL 65 Query: 92 RTSKLLIPDDFKDYTLLYEEAKYFQLQPML 121 RT +LL+P +F DY L EA +++L+ ++ Sbjct: 66 RTHQLLLPTEFSDYLRLQREALFYELRSLV 95 >gi|19923973 potassium channel tetramerisation domain containing 12 [Homo sapiens] Length = 325 Score = 72.0 bits (175), Expect = 5e-13 Identities = 36/92 (39%), Positives = 60/92 (65%), Gaps = 3/92 (3%) Query: 32 VHIDVGGHMYTSSLATLTKYPESRIGRLFDGTEP--IVLDSLKQHYFIDRDGQMFRYILN 89 V ++VGG +Y + T+ P+S + R+F +P + DS K +F+DRDG +FRYIL+ Sbjct: 36 VELNVGGQVYVTRRCTVVSVPDSLLWRMFTQQQPQELARDS-KGRFFLDRDGFLFRYILD 94 Query: 90 FLRTSKLLIPDDFKDYTLLYEEAKYFQLQPML 121 +LR +L++PD F + + L EA+YF+L ++ Sbjct: 95 YLRDLQLVLPDYFPERSRLQREAEYFELPELV 126 >gi|55926200 potassium channel tetramerisation domain containing 16 [Homo sapiens] Length = 428 Score = 69.7 bits (169), Expect = 2e-12 Identities = 70/245 (28%), Positives = 109/245 (44%), Gaps = 52/245 (21%) Query: 32 VHIDVGGHMYTSSLATLTKYPESRIGRLF----DGTEPIVLDSLKQHYFIDRDGQMFRYI 87 V ++VGG +Y + +TL P S + ++F D + DS K +FIDRDG +FRYI Sbjct: 27 VELNVGGQVYFTRHSTLISIPHSLLWKMFSPKRDTANDLAKDS-KGRFFIDRDGFLFRYI 85 Query: 88 LNFLRTSKLLIPDDFKDYTLLYEEAKYFQLQPM--LLEMERWKQ-----------DRETG 134 L++LR ++++PD F + L EA+YFQL + LL + KQ D G Sbjct: 86 LDYLRDRQVVLPDHFPEKGRLKREAEYFQLPDLVKLLTPDEIKQSPDEFCHSDFEDASQG 145 Query: 135 RFSRPCE--------------CLVVRVAPDLGE------------RITLSGDKSLIEEVF 168 +R C + R + LG RI + G SL +EVF Sbjct: 146 SDTRICPPSSLLPADRKWGFITVGYRGSCTLGREGQADAKFRRVPRILVCGRISLAKEVF 205 Query: 169 PEIGDVMCNSVNAGWNHDSTHVIRFPLNGYCHLNSVQVLERLQQRGFEIVGSCGGGVDSS 228 E + + A + S ++F HL + + L + GF +V +C V +S Sbjct: 206 GETLNESRDPDRAPERYTSRFYLKFK-----HLE--RAFDMLSECGFHMV-ACNSSVTAS 257 Query: 229 QFSEY 233 ++Y Sbjct: 258 FINQY 262 >gi|38198663 potassium channel tetramerisation domain containing 8 [Homo sapiens] Length = 473 Score = 69.3 bits (168), Expect = 3e-12 Identities = 38/126 (30%), Positives = 67/126 (53%), Gaps = 10/126 (7%) Query: 5 LITRSPASPLNNQGIPTPAQLTKSNAPVHIDVGGHMYTSSLATLTKYPESRIGRLFDGTE 64 +++ S + + P P + V ++VGG +Y + +TL P+S + +F + Sbjct: 19 MVSSSSSPGASAAAAPGPCAPSPFPEVVELNVGGQVYVTKHSTLLSVPDSTLASMFSPSS 78 Query: 65 P---------IVLDSLKQHYFIDRDGQMFRYILNFLRTSKLLIPDDFKDYTLLYEEAKYF 115 P + DS + +FIDRDG +FRY+L++LR +L +P+ F + L EA+YF Sbjct: 79 PRGGARRRGELPRDS-RARFFIDRDGFLFRYVLDYLRDKQLALPEHFPEKERLLREAEYF 137 Query: 116 QLQPML 121 QL ++ Sbjct: 138 QLTDLV 143 >gi|155369221 potassium channel tetramerisation domain containing 19 [Homo sapiens] Length = 926 Score = 68.2 bits (165), Expect = 7e-12 Identities = 39/109 (35%), Positives = 59/109 (54%), Gaps = 13/109 (11%) Query: 32 VHIDVGGHMYTSSLATLTKYPESRIGRLFDGTEPIVLDSLKQHYFIDRDGQMFRYILNFL 91 + + VG H Y ++L TL KYPE L + + + Q I DGQMFR+ILNFL Sbjct: 398 IKVYVGSHWYATTLQTLLKYPE-----LLSNPQRVYWITYGQTLLIHGDGQMFRHILNFL 452 Query: 92 RTSKLLIPDDFKDYTLLYEEAKYFQLQPMLLE-------MERWKQDRET 133 R KL +P +FK++ L +E + + + P L E + W Q++E+ Sbjct: 453 RLGKLFLPSEFKEWPLFCQEVEEYHI-PSLSEALAQCEAYKSWTQEKES 500 Score = 54.3 bits (129), Expect = 1e-07 Identities = 37/116 (31%), Positives = 59/116 (50%), Gaps = 6/116 (5%) Query: 33 HIDVGGHMYTSSLATLTKYPESRIGRLFDGTEPIVLDSLKQHYFIDRDGQMFRYILNFLR 92 H +VGG ++ + L+++P+S + + + S Q FIDRDG FR++ +L Sbjct: 16 HFNVGGWHFSVPRSKLSQFPDSLLWK----EASALTSSESQRLFIDRDGSTFRHVHYYLY 71 Query: 93 TSKLLIPDDFKDYTLLYEEAKYFQLQPMLLEMERWKQDRETGRFSRPCECLVVRVA 148 TSKL + LLYE+A QL P+L ++ K+ + R RP + V A Sbjct: 72 TSKLSF-SSCAELNLLYEQALGLQLMPLLQTLDNLKEGKHHLRV-RPADLPVAERA 125 Score = 42.7 bits (99), Expect = 3e-04 Identities = 19/44 (43%), Positives = 30/44 (68%), Gaps = 1/44 (2%) Query: 84 FRYILNFLRTSKLLIPDDFKDYTLLYEEAKYFQLQPMLLEMERW 127 FR+I+NFLR+ K+L+PD+F + +L E + ++ P L E RW Sbjct: 211 FRFIVNFLRSQKILLPDNFSNIDVLEAEVEILEI-PALTEAVRW 253 Score = 33.5 bits (75), Expect = 0.19 Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 7/66 (10%) Query: 40 MYTSSLATLTKYPESRIGRL-FDGTEPIVLDSLKQHYFIDRDGQMFRYILNFLRTSKLLI 98 +YT +L L KYP+S +G+L + T LD +I +G +F+++ N+L T +L + Sbjct: 286 LYTMALGLLVKYPDSALGQLRIEST----LDG--SRLYITGNGVLFQHVKNWLGTCRLPL 339 Query: 99 PDDFKD 104 + + Sbjct: 340 TETISE 345 >gi|23308551 potassium channel tetramerisation domain containing 7 [Homo sapiens] Length = 289 Score = 62.4 bits (150), Expect = 4e-10 Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 5/117 (4%) Query: 10 PASPLNNQ-GIPTPAQLTKSNAPVHIDVGGHMYTSSLATLTKYPESRIGRLFDGTEPIVL 68 PA+P Q G P + V +++GG +T+ L+TL Y ++ + +F G I Sbjct: 30 PATPTATQAGHALPLLPQEFPEVVPLNIGGAHFTTRLSTLRCYEDTMLAAMFSGRHYIPT 89 Query: 69 DSLKQHYFIDRDGQMFRYILNFLRTSKLLIPDDFKDYTLLYEEAKYFQLQPMLLEME 125 DS + YFIDRDG F +LNFLR+ L + + +Y+EA+Y+ + P+L ++E Sbjct: 90 DS-EGRYFIDRDGTHFGDVLNFLRSGDLPPRERVR---AVYKEAQYYAIGPLLEQLE 142 >gi|142356950 potassium channel tetramerisation domain containing 14 [Homo sapiens] Length = 255 Score = 61.2 bits (147), Expect = 8e-10 Identities = 40/132 (30%), Positives = 72/132 (54%), Gaps = 14/132 (10%) Query: 1 MSRPLITRSPASPLNNQGIPTPAQLTKSNAPVHIDVGGHMYTSSLATLTKYPESRIGRLF 60 + RP+ + +PL P P + T S V ++VGG +T++L TL K+P S++ +F Sbjct: 7 VERPVGRMTSQTPLPQS--PRPRRPTMSTV-VELNVGGEFHTTTLGTLRKFPGSKLAEMF 63 Query: 61 DGTEPIVLDSLKQHYFIDRDGQMFRYILNFLRTSKL---LIPDDFKDYTLLYEEAKYFQL 117 D+ + +FIDR FR IL++LRT ++ IP+ +Y EA+++++ Sbjct: 64 SSLAKASTDA-EGRFFIDRPSTYFRPILDYLRTGQVPTQHIPE-------VYREAQFYEI 115 Query: 118 QPMLLEMERWKQ 129 +P++ +E Q Sbjct: 116 KPLVKLLEDMPQ 127 >gi|51036594 potassium channel tetramerisation domain containing 11 [Homo sapiens] Length = 232 Score = 57.8 bits (138), Expect = 9e-09 Identities = 25/48 (52%), Positives = 36/48 (75%) Query: 74 HYFIDRDGQMFRYILNFLRTSKLLIPDDFKDYTLLYEEAKYFQLQPML 121 HYFIDRDG+ FR+ILNFLR +L +P + + LL EA ++Q++P+L Sbjct: 23 HYFIDRDGKAFRHILNFLRLGRLDLPRGYGETALLRAEADFYQIRPLL 70 >gi|13994353 potassium channel tetramerisation domain containing 10 [Homo sapiens] Length = 313 Score = 57.0 bits (136), Expect = 2e-08 Identities = 34/106 (32%), Positives = 63/106 (59%), Gaps = 2/106 (1%) Query: 28 SNAPVHIDVGGHMYTSSLATLTKYPESRIGRLFDGTEPIVLDSLKQHYFIDRDGQMFRYI 87 S+ V ++VGG +Y +++ TLTK ++ + +F G ++ DS + IDR G+ F I Sbjct: 30 SSKYVKLNVGGALYYTTMQTLTKQ-DTMLKAMFSGRMEVLTDS-EGWILIDRCGKHFGTI 87 Query: 88 LNFLRTSKLLIPDDFKDYTLLYEEAKYFQLQPMLLEMERWKQDRET 133 LN+LR + +P+ ++ L EAKY+ +Q ++ E + Q+++T Sbjct: 88 LNYLRDGAVPLPESRREIEELLAEAKYYLVQGLVEECQAALQNKDT 133 >gi|45387953 potassium channel tetramerization domain containing 18 [Homo sapiens] Length = 426 Score = 54.3 bits (129), Expect = 1e-07 Identities = 29/84 (34%), Positives = 50/84 (59%), Gaps = 2/84 (2%) Query: 32 VHIDVGGHMYTSSLATLTKYPESRIGRLFDGTEPIVLDSLKQHYFIDRDGQMFRYILNFL 91 + ++VGG +YT+ +L ++ +S + +F G P+ D IDRDG++F+Y+L++L Sbjct: 14 LRLNVGGCIYTARRESLCRFKDSMLASMFSGRFPLKTDE-SGACVIDRDGRLFKYLLDYL 72 Query: 92 RTSKLLIPDDFKDYTLLYEEAKYF 115 ++ IP D + L EEA YF Sbjct: 73 H-GEVQIPTDEQTRIALQEEADYF 95 >gi|223005950 SH3KBP1 binding protein 1 [Homo sapiens] Length = 707 Score = 53.1 bits (126), Expect = 2e-07 Identities = 42/118 (35%), Positives = 63/118 (53%), Gaps = 8/118 (6%) Query: 21 TPAQLTKSNAP----VHIDVGGHMYTSSLATLTKYPESRIGRLFDGTEPIVLDSLKQHYF 76 T A+ S P +H++VGG +++S TLT P+S L G + D F Sbjct: 6 TAAEGVPSRGPPGEVIHLNVGGKRFSTSRQTLTWIPDSFFSSLLSGRISTLKDETGA-IF 64 Query: 77 IDRDGQMFRYILNFLRTSKLLIPDDFKDYTLLYEEAKYFQLQPMLLEME-RWKQDRET 133 IDRD +F ILNFLRT K L P +LL+ EA+++ L P++ ++ R + DR + Sbjct: 65 IDRDPTVFAPILNFLRT-KELDPRGVHGSSLLH-EAQFYGLTPLVRRLQLREELDRSS 120 >gi|10863937 tumor necrosis factor, alpha-induced protein 1 [Homo sapiens] Length = 316 Score = 52.4 bits (124), Expect = 4e-07 Identities = 35/140 (25%), Positives = 74/140 (52%), Gaps = 4/140 (2%) Query: 29 NAPVHIDVGGHMYTSSLATLTKYPESRIGRLFDGTEPIVLDSLKQHYFIDRDGQMFRYIL 88 N V ++VGG +Y +++ LT++ ++ + +F G ++ D + IDR G+ F IL Sbjct: 27 NKYVQLNVGGSLYYTTVRALTRH-DTMLKAMFSGRMEVLTDK-EGWILIDRCGKHFGTIL 84 Query: 89 NFLRTSKLLIPDDFKDYTLLYEEAKYFQLQPMLLEMERWKQDRETGRFSRPCECLVVRVA 148 N+LR + +P + ++ L EAKY+ +Q ++ + QD++ + C ++ Sbjct: 85 NYLRDDTITLPQNRQEIKELMAEAKYYLIQGLVNMCQSALQDKKDS-YQPVCNIPIITSL 143 Query: 149 PDLGERITLSGDKSLIEEVF 168 + ER+ S K +++ ++ Sbjct: 144 KE-EERLIESSTKPVVKLLY 162 >gi|30578412 potassium channel tetramerisation domain containing 13 [Homo sapiens] Length = 329 Score = 50.8 bits (120), Expect = 1e-06 Identities = 33/110 (30%), Positives = 63/110 (57%), Gaps = 3/110 (2%) Query: 25 LTKSNAPVHIDVGGHMYTSSLATLTKYPESRIGRLFDGTEPIVLDSLKQHYFIDRDGQMF 84 LT ++ V ++VGG ++ ++L TLT ++ + +F G ++ D+ IDR G+ F Sbjct: 36 LTPNSKYVKLNVGGSLHYTTLRTLTGQ-DTMLKAMFSGRVEVLTDA-GGWVLIDRSGRHF 93 Query: 85 RYILNFLRTSKLLIPDDFKDYTLLYEEAKYFQLQPMLLEME-RWKQDRET 133 ILN+LR + +P+ ++ L EA+Y+ +Q ++ + + +Q RET Sbjct: 94 GTILNYLRDGSVPLPESTRELGELLGEARYYLVQGLIEDCQLALQQKRET 143 >gi|169234778 potassium channel tetramerisation domain containing 17 [Homo sapiens] Length = 297 Score = 50.4 bits (119), Expect = 1e-06 Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 1/90 (1%) Query: 32 VHIDVGGHMYTSSLATLTKYPESRIGRLFDGTEPIVLDSLKQHYFIDRDGQMFRYILNFL 91 V ++VGG ++ ++ TL + +S + RL G E Y IDRD F ILNFL Sbjct: 33 VRLNVGGTVFLTTRQTLCREQKSFLSRLCQGEELQSDRDETGAYLIDRDPTYFGPILNFL 92 Query: 92 RTSKLLIPDDFKDYTLLYEEAKYFQLQPML 121 R KL++ D + +L EEA+++ + P++ Sbjct: 93 RHGKLVLDKDMAEEGVL-EEAEFYNIGPLI 121 >gi|27436981 potassium voltage-gated channel, Shal-related subfamily, member 1 [Homo sapiens] Length = 647 Score = 49.3 bits (116), Expect = 3e-06 Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 6/112 (5%) Query: 13 PLNNQGIPTP--AQLTKSNAPVHIDVGGHMYTSSLATLTKYPESRIGRLFDGTEPIVLDS 70 PL Q +P + ++ + + ++V G + + TL +YP++ +G + D+ Sbjct: 21 PLAQQPLPPAPGVKASRGDEVLVVNVSGRRFETWKNTLDRYPDTLLG---SSEKEFFYDA 77 Query: 71 LKQHYFIDRDGQMFRYILNFLRTSKLLIPDDFKDYTLLYEEAKYFQLQPMLL 122 YF DRD MFR++LNF RT +L P + EE ++ L P L+ Sbjct: 78 DSGEYFFDRDPDMFRHVLNFYRTGRLHCPRQ-ECIQAFDEELAFYGLVPELV 128 >gi|25952108 potassium voltage-gated channel delayed-rectifier protein S3 [Homo sapiens] Length = 491 Score = 48.9 bits (115), Expect = 4e-06 Identities = 26/99 (26%), Positives = 56/99 (56%), Gaps = 8/99 (8%) Query: 32 VHIDVGGHMYTSSLATLTKYPESRIGRLFD-GTEPIVLDSLKQH------YFIDRDGQMF 84 V+++VGG + +TL ++P +R+G+L +E +L+ + Y+ DR+ +F Sbjct: 17 VNLNVGGFKQSVDQSTLLRFPHTRLGKLLTCHSEEAILELCDDYSVADKEYYFDRNPSLF 76 Query: 85 RYILNFLRTSKLLIPDDFKDYTLLYEEAKYFQLQPMLLE 123 RY+LNF T KL + ++ ++ +E +Y+ + + ++ Sbjct: 77 RYVLNFYYTGKLHVMEELCVFSFC-QEIEYWGINELFID 114 >gi|53829365 potassium channel tetramerisation domain containing 2 [Homo sapiens] Length = 263 Score = 48.9 bits (115), Expect = 4e-06 Identities = 35/104 (33%), Positives = 58/104 (55%), Gaps = 5/104 (4%) Query: 32 VHIDVGGHMYTSSLATLTKYPESRIGRLFDGTEPIVLDSLKQH---YFIDRDGQMFRYIL 88 V ++VGG + ++ TL + P+S + RL +P LDS K Y IDRD F IL Sbjct: 74 VRLNVGGTYFVTTRQTLGREPKSFLCRLCCQEDP-ELDSDKDETGAYLIDRDPTYFGPIL 132 Query: 89 NFLRTSKLLIPDDFKDYTLLYEEAKYFQLQPMLLEMERWKQDRE 132 N+LR KL+I + + +L EEA+++ + ++ ++ +D E Sbjct: 133 NYLRHGKLIITKELAEEGVL-EEAEFYNIASLVRLVKERIRDNE 175 >gi|9789987 potassium voltage-gated channel, Shal-related subfamily, member 2 [Homo sapiens] Length = 630 Score = 47.4 bits (111), Expect = 1e-05 Identities = 33/113 (29%), Positives = 55/113 (48%), Gaps = 7/113 (6%) Query: 13 PLNNQGIPTPAQLTKS---NAPVHIDVGGHMYTSSLATLTKYPESRIGRLFDGTEPIVLD 69 P+ + +P P + + +A + ++V G + + TL +YP++ +G Sbjct: 21 PVASGPMPAPPRQERKRTQDALIVLNVSGTRFQTWQDTLERYPDTLLG---SSERDFFYH 77 Query: 70 SLKQHYFIDRDGQMFRYILNFLRTSKLLIPDDFKDYTLLYEEAKYFQLQPMLL 122 Q YF DRD +FR+ILNF RT KL P + + EE +F L P ++ Sbjct: 78 PETQQYFFDRDPDIFRHILNFYRTGKLHYP-RHECISAYDEELAFFGLIPEII 129 >gi|46255026 potassium channel tetramerisation domain containing 3 [Homo sapiens] Length = 815 Score = 47.0 bits (110), Expect = 2e-05 Identities = 34/102 (33%), Positives = 51/102 (50%), Gaps = 7/102 (6%) Query: 22 PAQLTKSNAPVHIDVGGHMYTSSLATLTKYPESRIGRLFDGTEPIVLDSLKQHYFIDRDG 81 PA S V ++VGG +++S TL P+S L G + D FIDRD Sbjct: 10 PAAAAGSGEIVQLNVGGTRFSTSRQTLMWIPDSFFSSLLSGRISTLRDETGA-IFIDRDP 68 Query: 82 QMFRYILNFLRTSKLLIPDDFKDYTL--LYEEAKYFQLQPML 121 F ILNFLRT +L D + ++ L EA+++ + P++ Sbjct: 69 AAFAPILNFLRTKEL----DLRGVSINVLRHEAEFYGITPLV 106 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.321 0.139 0.420 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 10,088,889 Number of Sequences: 37866 Number of extensions: 442496 Number of successful extensions: 1126 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 49 Number of HSP's successfully gapped in prelim test: 23 Number of HSP's that attempted gapping in prelim test: 1038 Number of HSP's gapped (non-prelim): 77 length of query: 257 length of database: 18,247,518 effective HSP length: 100 effective length of query: 157 effective length of database: 14,460,918 effective search space: 2270364126 effective search space used: 2270364126 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.