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Search of human proteins with 39780571
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|39780571 misato [Homo sapiens]
(570 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|39780571 misato [Homo sapiens] 1174 0.0
gi|42558279 tubulin, beta 8 [Homo sapiens] 40 0.006
gi|60498978 elastin microfibril interfacer 2 [Homo sapiens] 39 0.010
gi|50592998 delta-tubulin [Homo sapiens] 39 0.010
gi|29788768 tubulin, beta 2B [Homo sapiens] 37 0.064
gi|13562114 beta tubulin 1, class VI [Homo sapiens] 37 0.064
gi|4507729 tubulin, beta 2 [Homo sapiens] 37 0.064
gi|29788785 tubulin, beta [Homo sapiens] 36 0.083
gi|5174735 tubulin, beta, 2 [Homo sapiens] 36 0.083
gi|50592996 tubulin, beta, 4 [Homo sapiens] 36 0.11
gi|7706751 tubulin, gamma 2 [Homo sapiens] 35 0.19
gi|139394604 bromo adjacent homology domain containing 1 [Homo s... 35 0.19
gi|14210536 tubulin, beta 6 [Homo sapiens] 35 0.19
gi|31543831 tubulin, gamma 1 [Homo sapiens] 35 0.24
gi|21361322 tubulin, beta 4 [Homo sapiens] 35 0.24
gi|13375913 transmembrane protein 149 [Homo sapiens] 33 0.70
gi|108773804 Fraser syndrome 1 [Homo sapiens] 33 0.92
gi|7705915 tubulin, epsilon 1 [Homo sapiens] 32 1.2
gi|55770868 tubulin, beta polypeptide 4, member Q [Homo sapiens] 32 1.2
gi|239508712 PREDICTED: similar to rCG47812 [Homo sapiens] 32 2.0
gi|21389533 BTB (POZ) domain containing 14A [Homo sapiens] 32 2.0
gi|27477122 intestinal cell kinase [Homo sapiens] 31 2.7
gi|7662388 intestinal cell kinase [Homo sapiens] 31 2.7
gi|114796630 homeodomain interacting protein kinase 3 isoform 2 ... 31 2.7
gi|114796624 homeodomain interacting protein kinase 3 isoform 1 ... 31 2.7
gi|10092601 eukaryotic translation initiation factor 4 gamma, 3 ... 31 2.7
gi|50541959 GATA binding protein 3 isoform 1 [Homo sapiens] 31 3.5
gi|4503929 GATA binding protein 3 isoform 2 [Homo sapiens] 31 3.5
gi|194328738 hypothetical protein LOC23247 [Homo sapiens] 30 4.6
gi|16554449 zonadhesin isoform 3 [Homo sapiens] 30 4.6
>gi|39780571 misato [Homo sapiens]
Length = 570
Score = 1174 bits (3036), Expect = 0.0
Identities = 570/570 (100%), Positives = 570/570 (100%)
Query: 1 MAGGAREVLTLQLGHFAGFVGAHWWNQQDAALGRATDSKEPPGELCPDVLYRTGRTLHGQ 60
MAGGAREVLTLQLGHFAGFVGAHWWNQQDAALGRATDSKEPPGELCPDVLYRTGRTLHGQ
Sbjct: 1 MAGGAREVLTLQLGHFAGFVGAHWWNQQDAALGRATDSKEPPGELCPDVLYRTGRTLHGQ 60
Query: 61 ETYTPRLILMDLKGSLSSLKEEGGLYRDKQLDAAIAWQGKLTTHKEELYPKNPYLQDFLS 120
ETYTPRLILMDLKGSLSSLKEEGGLYRDKQLDAAIAWQGKLTTHKEELYPKNPYLQDFLS
Sbjct: 61 ETYTPRLILMDLKGSLSSLKEEGGLYRDKQLDAAIAWQGKLTTHKEELYPKNPYLQDFLS 120
Query: 121 AEGVLSSDGVWRVKSIPNGKGSSPLPTATTPKPLIPTEASIRVWSDFLRVHLHPRSICMI 180
AEGVLSSDGVWRVKSIPNGKGSSPLPTATTPKPLIPTEASIRVWSDFLRVHLHPRSICMI
Sbjct: 121 AEGVLSSDGVWRVKSIPNGKGSSPLPTATTPKPLIPTEASIRVWSDFLRVHLHPRSICMI 180
Query: 181 QKYNHDGEAGRLEAFGQGESVLKEPKYQEELEDRLHFYVEECDYLQGFQILCDLHDGFSG 240
QKYNHDGEAGRLEAFGQGESVLKEPKYQEELEDRLHFYVEECDYLQGFQILCDLHDGFSG
Sbjct: 181 QKYNHDGEAGRLEAFGQGESVLKEPKYQEELEDRLHFYVEECDYLQGFQILCDLHDGFSG 240
Query: 241 VGAKAAELLQDEYSGRGIITWGLLPGPYHRGEAQRNIYRLLNTAFGLVHLTAHSSLVCPL 300
VGAKAAELLQDEYSGRGIITWGLLPGPYHRGEAQRNIYRLLNTAFGLVHLTAHSSLVCPL
Sbjct: 241 VGAKAAELLQDEYSGRGIITWGLLPGPYHRGEAQRNIYRLLNTAFGLVHLTAHSSLVCPL 300
Query: 301 SLGGSLGLRPEPPVSFPYLHYDATLPFHCSAILATALDTVTVPYRLCSSPVSMVHLADML 360
SLGGSLGLRPEPPVSFPYLHYDATLPFHCSAILATALDTVTVPYRLCSSPVSMVHLADML
Sbjct: 301 SLGGSLGLRPEPPVSFPYLHYDATLPFHCSAILATALDTVTVPYRLCSSPVSMVHLADML 360
Query: 361 SFCGKKVVTAGAIIPFPLAPGQSLPDSLMQFGGATPWTPLSACGEPSGTRCFAQSVVLRG 420
SFCGKKVVTAGAIIPFPLAPGQSLPDSLMQFGGATPWTPLSACGEPSGTRCFAQSVVLRG
Sbjct: 361 SFCGKKVVTAGAIIPFPLAPGQSLPDSLMQFGGATPWTPLSACGEPSGTRCFAQSVVLRG 420
Query: 421 IDRACHTSQLTPGTPPPSALHACTTGEEILAQYLQQQQPGVMSSSHLLLTPCRVAPPYPH 480
IDRACHTSQLTPGTPPPSALHACTTGEEILAQYLQQQQPGVMSSSHLLLTPCRVAPPYPH
Sbjct: 421 IDRACHTSQLTPGTPPPSALHACTTGEEILAQYLQQQQPGVMSSSHLLLTPCRVAPPYPH 480
Query: 481 LFSSCSPPGMVLDGSPKGAAVESIPVFGALCSSSSLHQTLEALARDLTKLDLRRWASFMD 540
LFSSCSPPGMVLDGSPKGAAVESIPVFGALCSSSSLHQTLEALARDLTKLDLRRWASFMD
Sbjct: 481 LFSSCSPPGMVLDGSPKGAAVESIPVFGALCSSSSLHQTLEALARDLTKLDLRRWASFMD 540
Query: 541 AGVEHDDVAELLQELQSLAQCYQGGDSLVD 570
AGVEHDDVAELLQELQSLAQCYQGGDSLVD
Sbjct: 541 AGVEHDDVAELLQELQSLAQCYQGGDSLVD 570
>gi|42558279 tubulin, beta 8 [Homo sapiens]
Length = 444
Score = 40.0 bits (92), Expect = 0.006
Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 209 EELEDRLHFYVEECDYLQGFQILCDLHDGF-SGVGAKAAELLQDEYSGRGIITWGLLPGP 267
E + D + E CD LQGFQ+ L G SG+G +++EY R I T+ +LP P
Sbjct: 114 ESVMDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLLSKIREEYPDRIINTFSILPSP 173
>gi|60498978 elastin microfibril interfacer 2 [Homo sapiens]
Length = 1053
Score = 39.3 bits (90), Expect = 0.010
Identities = 38/151 (25%), Positives = 58/151 (38%), Gaps = 4/151 (2%)
Query: 13 LGHFAGFVGAHWWNQQDAALGRATDSKEPPGELCPDVLYRTGRTLHGQETYTPRLILMDL 72
+ H + W Q + KE + +V GR H ++T + L +
Sbjct: 663 VAHCCSQLEERWQRLQSQVISELDACKECTQGVQREVSMVEGRVSHMEKTCSK---LDSI 719
Query: 73 KGSLSSLKEEGGLYRDKQLDAAIAWQGKLTTHKEELYPKNPYLQDFLSAEGVLSSDGVWR 132
G+L +KE + + G L +H ++ +Q F S +S+D
Sbjct: 720 SGNLQRIKEGLNKHVSSLWNCVRQMNGTLRSHSRDISGLKNSVQQFYSHVFQISTDLQDL 779
Query: 133 VKSIPNGKGSSPLPTATTPK-PLIPTEASIR 162
VK P+ K SP P A PK PL P A R
Sbjct: 780 VKFQPSAKAPSPPPPAEAPKEPLQPEPAPPR 810
>gi|50592998 delta-tubulin [Homo sapiens]
Length = 453
Score = 39.3 bits (90), Expect = 0.010
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 6/87 (6%)
Query: 205 PKYQEELEDRLHFYVEECDYLQGFQILCDLHDGF-SGVGAKAAELLQDEYSGRGIITWGL 263
P+++E + + + VE+CD GF I+ + G SG+GA + L+D+YS +
Sbjct: 113 PRHEESIMNIIRKEVEKCDSFSGFFIIMSMAGGTGSGLGAFVTQNLEDQYSNS--LKMNQ 170
Query: 264 LPGPYHRGEAQRNIYRLLNTAFGLVHL 290
+ PY GE I + N+ L HL
Sbjct: 171 IIWPYGTGEV---IVQNYNSILTLSHL 194
>gi|29788768 tubulin, beta 2B [Homo sapiens]
Length = 445
Score = 36.6 bits (83), Expect = 0.064
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 220 EECDYLQGFQILCDLHDGF-SGVGAKAAELLQDEYSGRGIITWGLLPGP 267
E CD LQGFQ+ L G SG+G +++EY R + T+ ++P P
Sbjct: 125 ESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSP 173
>gi|13562114 beta tubulin 1, class VI [Homo sapiens]
Length = 451
Score = 36.6 bits (83), Expect = 0.064
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 220 EECDYLQGFQILCDLHDGF-SGVGAKAAELLQDEYSGRGIITWGLLPGP 267
E CD LQGFQI+ L G SG+G +++EY R + ++ ++P P
Sbjct: 125 ESCDCLQGFQIVHSLGGGTGSGMGTLLMNKIREEYPDRIMNSFSVMPSP 173
>gi|4507729 tubulin, beta 2 [Homo sapiens]
Length = 445
Score = 36.6 bits (83), Expect = 0.064
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 220 EECDYLQGFQILCDLHDGF-SGVGAKAAELLQDEYSGRGIITWGLLPGP 267
E CD LQGFQ+ L G SG+G +++EY R + T+ ++P P
Sbjct: 125 ESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSP 173
>gi|29788785 tubulin, beta [Homo sapiens]
Length = 444
Score = 36.2 bits (82), Expect = 0.083
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 220 EECDYLQGFQILCDLHDGF-SGVGAKAAELLQDEYSGRGIITWGLLPGP 267
E CD LQGFQ+ L G SG+G +++EY R + T+ ++P P
Sbjct: 125 ESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSP 173
>gi|5174735 tubulin, beta, 2 [Homo sapiens]
Length = 445
Score = 36.2 bits (82), Expect = 0.083
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 220 EECDYLQGFQILCDLHDGF-SGVGAKAAELLQDEYSGRGIITWGLLPGP 267
E CD LQGFQ+ L G SG+G +++EY R + T+ ++P P
Sbjct: 125 ESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSP 173
>gi|50592996 tubulin, beta, 4 [Homo sapiens]
Length = 450
Score = 35.8 bits (81), Expect = 0.11
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 220 EECDYLQGFQILCDLHDGF-SGVGAKAAELLQDEYSGRGIITWGLLPGP 267
E CD LQGFQ+ L G SG+G +++EY R + T+ ++P P
Sbjct: 125 ENCDCLQGFQLTHSLGGGTGSGMGTLLISKVREEYPDRIMNTFSVVPSP 173
>gi|7706751 tubulin, gamma 2 [Homo sapiens]
Length = 451
Score = 35.0 bits (79), Expect = 0.19
Identities = 32/119 (26%), Positives = 52/119 (43%), Gaps = 12/119 (10%)
Query: 185 HDGEAGR--LEAFGQGESVLKEPKYQEELEDRLHFYVEECDYLQGFQILCDLHDGF-SGV 241
H G AG F QGE K E++ D + + D L+GF + + G SG+
Sbjct: 96 HGGGAGNNWASGFSQGE------KIHEDIFDIIDREADGSDSLEGFVLCHSIAGGTGSGL 149
Query: 242 GAKAAELLQDEYSGRGIITWGLLPGPYHRGEAQRNIYRLLNTAFGLVHLTAHSSLVCPL 300
G+ E L D Y + + T+ + P ++ E + + N+ L LT ++ V L
Sbjct: 150 GSYLLERLNDRYPKKLVQTYSVFP---YQDEMSDVVVQPYNSLLTLKRLTQNADCVVVL 205
Score = 31.2 bits (69), Expect = 2.7
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 8/72 (11%)
Query: 6 REVLTLQLGHFAGFVGAHWWNQQDAALGRA----TDSKEPPGELCPDVLYRTGRTLHGQE 61
RE++TLQLG +G +W Q A G + + G DV + E
Sbjct: 3 REIITLQLGQCGNQIGFEFWKQLCAEHGISPEGIVEEFATEGTDRKDVFFYQA----DDE 58
Query: 62 TYTPRLILMDLK 73
Y PR +L+DL+
Sbjct: 59 HYIPRAVLLDLE 70
>gi|139394604 bromo adjacent homology domain containing 1 [Homo
sapiens]
Length = 780
Score = 35.0 bits (79), Expect = 0.19
Identities = 61/258 (23%), Positives = 85/258 (32%), Gaps = 38/258 (14%)
Query: 299 PLSLGGSLGLRPEP-------PVSFPYLHYDATLPFHCSAILATALDTVTVPYR-LCSSP 350
PL +GG L+PEP P LH + F + + Y LC P
Sbjct: 315 PLLMGGQAALKPEPGRPGEESPAPKQELHQPS---FPTPQLSPLPMPGNPADYNGLCVGP 371
Query: 351 VSMVHLADMLSFCGKKVVTAGAIIPFPLAPGQSL-------PDSLMQFGGATP-WTPLSA 402
+ L +CG++ + G P P+ P L + L+ + P TP
Sbjct: 372 -ELTALGSFYLYCGQEGLQCGGYSPCPMLPEGKLSPVAAPHEEGLLLAPSSVPSGTPFQH 430
Query: 403 CGEPSGTRCFAQSVVLRGID-------RACHTSQLTPGTP--PPSALHACTTGEEILAQY 453
S C ++ + G H G P P A C + ++
Sbjct: 431 PPWGSSRYCSSEDTGVNGYSICGVLPLSVTHAGTTCGGCPYKMPFAAEGCRSLGQLEFPL 490
Query: 454 LQQQQPGVMSSSHLLLTPCRV------APPYPHLFSSCSPPGMVLDGSPKGAAVESIPVF 507
+ P S +H LL C V A P PHL + S P V P+ A S
Sbjct: 491 PEAGHPA--SPAHPLL-GCPVPSVPPAAEPVPHLQTPTSEPQTVARACPQSAKPPSGSKS 547
Query: 508 GALCSSSSLHQTLEALAR 525
G SS H AR
Sbjct: 548 GLRTGSSCRHTARSKAAR 565
>gi|14210536 tubulin, beta 6 [Homo sapiens]
Length = 446
Score = 35.0 bits (79), Expect = 0.19
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 220 EECDYLQGFQILCDLHDGF-SGVGAKAAELLQDEYSGRGIITWGLLPGP 267
E CD LQGFQ+ L G SG+G +++E+ R + T+ ++P P
Sbjct: 125 EHCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVMPSP 173
>gi|31543831 tubulin, gamma 1 [Homo sapiens]
Length = 451
Score = 34.7 bits (78), Expect = 0.24
Identities = 32/119 (26%), Positives = 52/119 (43%), Gaps = 12/119 (10%)
Query: 185 HDGEAGR--LEAFGQGESVLKEPKYQEELEDRLHFYVEECDYLQGFQILCDLHDGF-SGV 241
H G AG F QGE K E++ D + + D L+GF + + G SG+
Sbjct: 96 HGGGAGNNWASGFSQGE------KIHEDIFDIIDREADGSDSLEGFVLCHSIAGGTGSGL 149
Query: 242 GAKAAELLQDEYSGRGIITWGLLPGPYHRGEAQRNIYRLLNTAFGLVHLTAHSSLVCPL 300
G+ E L D Y + + T+ + P ++ E + + N+ L LT ++ V L
Sbjct: 150 GSYLLERLNDRYPKKLVQTYSVFP---NQDEMSDVVVQPYNSLLTLKRLTQNADCVVVL 205
Score = 31.2 bits (69), Expect = 2.7
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 8/72 (11%)
Query: 6 REVLTLQLGHFAGFVGAHWWNQQDAALGRA----TDSKEPPGELCPDVLYRTGRTLHGQE 61
RE++TLQLG +G +W Q A G + + G DV + E
Sbjct: 3 REIITLQLGQCGNQIGFEFWKQLCAEHGISPEGIVEEFATEGTDRKDVFFYQA----DDE 58
Query: 62 TYTPRLILMDLK 73
Y PR +L+DL+
Sbjct: 59 HYIPRAVLLDLE 70
>gi|21361322 tubulin, beta 4 [Homo sapiens]
Length = 444
Score = 34.7 bits (78), Expect = 0.24
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 220 EECDYLQGFQILCDLHDGF-SGVGAKAAELLQDEYSGRGIITWGLLPGP 267
E CD LQGFQ+ L G SG+G +++E+ R + T+ ++P P
Sbjct: 125 ESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVVPSP 173
>gi|13375913 transmembrane protein 149 [Homo sapiens]
Length = 355
Score = 33.1 bits (74), Expect = 0.70
Identities = 31/98 (31%), Positives = 37/98 (37%), Gaps = 34/98 (34%)
Query: 338 DTVTVPYRLCSSPVSMVHLADMLSFCGKKVVTAGAIIPFPLAPGQSLPDSLMQFGGATPW 397
D VT P+R CSS A++ S CG GA+ P P A GG TPW
Sbjct: 67 DFVTPPFRKCSSGQCNPDGAELCSPCG-----GGAVTPTPAAG-----------GGRTPW 110
Query: 398 TPLSACGEPSGTRCFAQSVVLRGIDRACHTSQLTPGTP 435
RC + V +G LTPG P
Sbjct: 111 ------------RCRERPVPAKG------HCPLTPGNP 130
>gi|108773804 Fraser syndrome 1 [Homo sapiens]
Length = 4011
Score = 32.7 bits (73), Expect = 0.92
Identities = 37/134 (27%), Positives = 48/134 (35%), Gaps = 27/134 (20%)
Query: 386 DSLMQFGGATPWTPLSACGEPSGTR-------CFAQSVVLRGIDRACHTSQLTPGTPPPS 438
+S G TP + +AC P R C G+ +ACH+S L P PS
Sbjct: 610 NSCASCSGPTP-SHCTACSPPKALRQGHCLPRCGEGFYSDHGVCKACHSSCLACMGPAPS 668
Query: 439 ALHACTTGEEILAQYLQQQQPGVMSS-------SHLLLTPC-----------RVAPPYPH 480
C EE L Q Q G+ S +H L R A PH
Sbjct: 669 HCTGCKKPEEGL-QVEQLSDVGIPSGECLAQCRAHFYLESTGICEACHQSCFRCAGKSPH 727
Query: 481 LFSSCSPPGMVLDG 494
+ C P ++LDG
Sbjct: 728 NCTDCGPSHVLLDG 741
>gi|7705915 tubulin, epsilon 1 [Homo sapiens]
Length = 475
Score = 32.3 bits (72), Expect = 1.2
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 207 YQEELEDRLHFYVEECDYLQGFQILCDLHDGF-SGVGAKAAELLQDEYSGRGIITWGLLP 265
YQ+++ ++ E CD LQ F I+ + G SG+G ++L+DE+ + +
Sbjct: 120 YQDQILEKFRKSAEHCDCLQCFFIIHSMGGGTGSGLGTFLLKVLEDEFPE----VYRFVT 175
Query: 266 GPYHRGEAQRNIYRLLNTAFGLVHLTAHSSLVCPL 300
Y GE I N+ + L H+ V P+
Sbjct: 176 SIYPSGE-DDVITSPYNSILAMKELNEHADCVLPI 209
>gi|55770868 tubulin, beta polypeptide 4, member Q [Homo sapiens]
Length = 434
Score = 32.3 bits (72), Expect = 1.2
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 209 EELEDRLHFYVEECDYLQGFQILCDLHDGF-SGVGAKAAELLQDEYSGRGIITWGLL 264
E + D + E CD LQGFQ+ L G SG+G + +EY R I T +L
Sbjct: 114 ESVMDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIWEEYPDRIINTLSIL 170
>gi|239508712 PREDICTED: similar to rCG47812 [Homo sapiens]
Length = 812
Score = 31.6 bits (70), Expect = 2.0
Identities = 30/111 (27%), Positives = 43/111 (38%), Gaps = 13/111 (11%)
Query: 396 PWTPLSACGEPSGTRCFAQSVVLRGIDRACHT-----SQLTPGTPPPSALHACTTGEEIL 450
PW +S P+ S +L G A H + L GTPP +AL T + L
Sbjct: 635 PWKLVSCPRRPAVLTQTGSSGLL-GPSAAVHAGTPPQAALFQGTPPQAALFQGTPPQAAL 693
Query: 451 AQYLQQQQPGVMSSSHLLLTPCRVAPPYPHLFSSCSPPGMVLDGSPKGAAV 501
Q G+ + +L + PP L P +L G+P AA+
Sbjct: 694 VQ-------GIPPQAAVLCALLQGTPPQAALLQGTPPQAALLQGTPPQAAL 737
>gi|21389533 BTB (POZ) domain containing 14A [Homo sapiens]
Length = 587
Score = 31.6 bits (70), Expect = 2.0
Identities = 29/88 (32%), Positives = 39/88 (44%), Gaps = 17/88 (19%)
Query: 330 SAILATALDTVTVPYRLCSSPVSMVHLADMLSFCGKKVVTAGAII-----PFPL-APGQS 383
+ I+A D V V ++P G++V AG++I P PL A GQS
Sbjct: 504 ATIVALRTDAVNVDLSAAANPAFDA---------GEEVDGAGSVIQEVAAPEPLPADGQS 554
Query: 384 LPDSLMQFGG--ATPWTPLSACGEPSGT 409
P Q GG + P TP +A P GT
Sbjct: 555 PPQPFEQGGGGPSRPQTPAAAARRPEGT 582
>gi|27477122 intestinal cell kinase [Homo sapiens]
Length = 632
Score = 31.2 bits (69), Expect = 2.7
Identities = 27/100 (27%), Positives = 40/100 (40%), Gaps = 4/100 (4%)
Query: 75 SLSSLKEEGGLYRDKQLDAAIAWQGKLTTHKEELYPKNPYLQDFLSAEGVLSSDGVWRVK 134
+L S ++ L + L G L+ +E P NP+ LS + S G V
Sbjct: 480 TLRSAAKQHYLKHSRYLPGISIRNGILSNPGKEFIPPNPWSSSGLSGK----SSGTMSVI 535
Query: 135 SIPNGKGSSPLPTATTPKPLIPTEASIRVWSDFLRVHLHP 174
S N GSS ++ +P+ + S RVHL P
Sbjct: 536 SKVNSVGSSSTSSSGLTGNYVPSFLKKEIGSAMQRVHLAP 575
>gi|7662388 intestinal cell kinase [Homo sapiens]
Length = 632
Score = 31.2 bits (69), Expect = 2.7
Identities = 27/100 (27%), Positives = 40/100 (40%), Gaps = 4/100 (4%)
Query: 75 SLSSLKEEGGLYRDKQLDAAIAWQGKLTTHKEELYPKNPYLQDFLSAEGVLSSDGVWRVK 134
+L S ++ L + L G L+ +E P NP+ LS + S G V
Sbjct: 480 TLRSAAKQHYLKHSRYLPGISIRNGILSNPGKEFIPPNPWSSSGLSGK----SSGTMSVI 535
Query: 135 SIPNGKGSSPLPTATTPKPLIPTEASIRVWSDFLRVHLHP 174
S N GSS ++ +P+ + S RVHL P
Sbjct: 536 SKVNSVGSSSTSSSGLTGNYVPSFLKKEIGSAMQRVHLAP 575
>gi|114796630 homeodomain interacting protein kinase 3 isoform 2 [Homo
sapiens]
Length = 1194
Score = 31.2 bits (69), Expect = 2.7
Identities = 27/97 (27%), Positives = 40/97 (41%), Gaps = 14/97 (14%)
Query: 430 LTPGTPPPSALHACTTGEEILA---QYLQQQQPGVMSSS----HLLLTPCRVAPPYPHLF 482
L+ G+P +A+HA G L L +SS+ HLL +PC P H
Sbjct: 1071 LSHGSPNHTAVHAHLAGNTHLGGQPTLLPYPSSATLSSAAPVAHLLASPCTSRPMLQHPT 1130
Query: 483 SSCSPPGMVLDGSPKGAAVESIPVFGALCSSSSLHQT 519
+ S P ++ P G +P S ++HQT
Sbjct: 1131 YNISHPSGIVHQVPVGLNPRLLP-------SPTIHQT 1160
>gi|114796624 homeodomain interacting protein kinase 3 isoform 1 [Homo
sapiens]
Length = 1215
Score = 31.2 bits (69), Expect = 2.7
Identities = 27/97 (27%), Positives = 40/97 (41%), Gaps = 14/97 (14%)
Query: 430 LTPGTPPPSALHACTTGEEILA---QYLQQQQPGVMSSS----HLLLTPCRVAPPYPHLF 482
L+ G+P +A+HA G L L +SS+ HLL +PC P H
Sbjct: 1092 LSHGSPNHTAVHAHLAGNTHLGGQPTLLPYPSSATLSSAAPVAHLLASPCTSRPMLQHPT 1151
Query: 483 SSCSPPGMVLDGSPKGAAVESIPVFGALCSSSSLHQT 519
+ S P ++ P G +P S ++HQT
Sbjct: 1152 YNISHPSGIVHQVPVGLNPRLLP-------SPTIHQT 1181
>gi|10092601 eukaryotic translation initiation factor 4 gamma, 3
[Homo sapiens]
Length = 1585
Score = 31.2 bits (69), Expect = 2.7
Identities = 33/133 (24%), Positives = 49/133 (36%), Gaps = 18/133 (13%)
Query: 372 AIIPFPLAPGQSLPDSLMQFGGATPWTPLSACGEPSGTRCFAQSVVLRGIDRACHTSQLT 431
+I PL P + S+ + S P+ + +Q + ID C S
Sbjct: 258 SIAELPLPPSPTTVSSVAR----------STIAAPTSSALSSQPIFTTAIDDRCELSSPR 307
Query: 432 PGTPPPSALHACTTGEEILAQYLQQQQPGVMSSSHLLLTPCRVAPPYPHLFSSCSPPGMV 491
T P +L +CT + L P + + PC VAP L SS + +
Sbjct: 308 EDTIPIPSLTSCTETSDPL--------PTNENDDDICKKPCSVAPNDIPLVSSTNLINEI 359
Query: 492 LDGSPKGAAVESI 504
S K +A ESI
Sbjct: 360 NGVSEKLSATESI 372
>gi|50541959 GATA binding protein 3 isoform 1 [Homo sapiens]
Length = 444
Score = 30.8 bits (68), Expect = 3.5
Identities = 19/47 (40%), Positives = 22/47 (46%), Gaps = 4/47 (8%)
Query: 460 GVMSSSHLLLTPCRVAPPY-PHLFSSCSPPGMVLDGSPKGAAVESIP 505
G SS+H P PPY P S PP +L GSP G +S P
Sbjct: 210 GASSSTH---HPITTYPPYVPEYSSGLFPPSSLLGGSPTGFGCKSRP 253
>gi|4503929 GATA binding protein 3 isoform 2 [Homo sapiens]
Length = 443
Score = 30.8 bits (68), Expect = 3.5
Identities = 19/47 (40%), Positives = 22/47 (46%), Gaps = 4/47 (8%)
Query: 460 GVMSSSHLLLTPCRVAPPY-PHLFSSCSPPGMVLDGSPKGAAVESIP 505
G SS+H P PPY P S PP +L GSP G +S P
Sbjct: 210 GASSSTH---HPITTYPPYVPEYSSGLFPPSSLLGGSPTGFGCKSRP 253
>gi|194328738 hypothetical protein LOC23247 [Homo sapiens]
Length = 1618
Score = 30.4 bits (67), Expect = 4.6
Identities = 36/155 (23%), Positives = 61/155 (39%), Gaps = 34/155 (21%)
Query: 82 EGGLYRDKQLDAAIAWQGKLTTHKEELYPKNPYLQDFLSAEGVLSSDGVWRVKSIPNGK- 140
E Y D+ D + G L + ++E + P D E + G+ + IP +
Sbjct: 1134 EAIFYSDEMFDLDV---GSLDSLQDEEAMRRPSTADGEGDERPFTQAGLGADERIPELEL 1190
Query: 141 -GSSPLPTATTPKPLIPTEASIRV-----WSDF-----------------LRVHLH---- 173
SSP+P TTP+P I +++ W D L +HLH
Sbjct: 1191 PSSSPVPQVTTPEPGIYHGICLQLNFTASWGDLHYLGLTGLEVVGKEGQALPIHLHQISA 1250
Query: 174 -PRSICMIQKYNHDGEAGRLEAFGQGESVLKEPKY 207
PR + + +Y+ D A L+ G ++ E ++
Sbjct: 1251 SPRDLNELPEYSDDSRA--LDKLIDGTNITMEDEH 1283
>gi|16554449 zonadhesin isoform 3 [Homo sapiens]
Length = 2812
Score = 30.4 bits (67), Expect = 4.6
Identities = 18/57 (31%), Positives = 24/57 (42%)
Query: 455 QQQQPGVMSSSHLLLTPCRVAPPYPHLFSSCSPPGMVLDGSPKGAAVESIPVFGALC 511
Q +P + +S C Y + SCSP LDG +GA V S G +C
Sbjct: 2194 QGLKPPLWRNSSFCPLECPAYSSYTNCLPSCSPSCWDLDGRCEGAKVPSACAEGCIC 2250
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.136 0.425
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,331,518
Number of Sequences: 37866
Number of extensions: 1368123
Number of successful extensions: 3935
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 3867
Number of HSP's gapped (non-prelim): 89
length of query: 570
length of database: 18,247,518
effective HSP length: 108
effective length of query: 462
effective length of database: 14,157,990
effective search space: 6540991380
effective search space used: 6540991380
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.