TUBB8 28022

Name: TUBB8	Sequence: fasta or formatted (444aa)		NCBI GI: 42558279
Description: tubulin, beta 8		Referenced in: Tubulins and Microtubules
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.9 35 3 C cysteine 2.0 9 1 D aspartate 5.6 25 1 E glutamate 8.3 37 4 F phenylalanine 5.2 23 2 G glycine 7.4 33 3 H histidine 2.3 10 1 I isoleucine 4.3 19 2 K lysine 3.2 14 1 L leucine 7.7 34 3 M methionine 4.3 19 2 N asparagine 5.0 22 2 P proline 4.5 20 2 Q glutamine 4.7 21 2 R arginine 5.2 23 2 S serine 5.9 26 2 T threonine 6.3 28 2 V valine 5.9 26 2 W tryptophan 0.9 4 1 Y tyrosine 3.6 16 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 tubulin, beta 8 TUBB2C 0.922 tubulin, beta, 2 TUBB4 0.916 tubulin, beta 4 TUBB 0.910 tubulin, beta TUBB2B 0.905 tubulin, beta 2B TUBB2A 0.901 tubulin, beta 2 TUBB4Q 0.896 tubulin, beta polypeptide 4, member Q TUBB3 0.875 tubulin, beta, 4 TUBB6 0.865 tubulin, beta 6 TUBB1 0.786 beta tubulin 1, class VI LOC100130736 0.399 PREDICTED: similar to tubulin, beta 5 LOC100130736 0.399 PREDICTED: similar to tubulin, beta 5 TUBA1C 0.390 tubulin alpha 6 TUBA1B 0.389 tubulin, alpha, ubiquitous TUBA1A 0.385 tubulin, alpha 1a TUBA3D 0.385 tubulin, alpha 3d TUBA3C 0.385 tubulin, alpha 3c TUBA4A 0.383 tubulin, alpha 4a TUBA8 0.383 tubulin, alpha 8 TUBA3E 0.376 tubulin, alpha 3e TUBAL3 0.346 tubulin, alpha-like 3 TUBG1 0.302 tubulin, gamma 1 TUBG2 0.298 tubulin, gamma 2 TUBE1 0.274 tubulin, epsilon 1 LOC442434 0.190 PREDICTED: similar to hCG1784562 LOC442434 0.190 PREDICTED: similar to hCG1784562 LOC442434 0.190 PREDICTED: similar to hCG1784562 LOC100130736 0.146 PREDICTED: similar to hCG1647990 TUBD1 0.141 delta-tubulin LOC100292044 0.093 PREDICTED: similar to hCG1642465 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.