Guide to the Human Genome
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Name: MSTO1 Sequence: fasta or formatted (570aa) NCBI GI: 39780571
Description:

misato

Referenced in:

Tubulins and Microtubules

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.1         46           2
 C cysteine            2.8         16           1
 D aspartate           4.9         28           2
 E glutamate           5.4         31           2
 F phenylalanine       3.2         18           1
 G glycine             9.1         52           2
 H histidine           3.7         21           1
 I isoleucine          3.0         17           2
 K lysine              3.2         18           2
 L leucine            13.3         76           3
 M methionine          1.6          9           1
 N asparagine          1.1          6           1
 P proline             7.7         44           3
 Q glutamine           4.9         28           4
 R arginine            4.4         25           2
 S serine              8.4         48           4
 T threonine           5.4         31           2
 V valine              5.3         30           2
 W tryptophan          1.4          8           2
 Y tyrosine            3.2         18           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   misato 
TUBB8                 0.013   tubulin, beta 8 
EMILIN2               0.012   elastin microfibril interfacer 2 
TUBD1                 0.012   delta-tubulin 
TUBB2B                0.010   tubulin, beta 2B 
TUBB1                 0.010   beta tubulin 1, class VI 
TUBB2A                0.010   tubulin, beta 2 
TUBB                  0.010   tubulin, beta 
TUBB2C                0.010   tubulin, beta, 2 
TUBB3                 0.010   tubulin, beta, 4 
TUBG2                 0.009   tubulin, gamma 2 
BAHD1                 0.009   bromo adjacent homology domain containing 1 
TUBB6                 0.009   tubulin, beta 6 
TUBG1                 0.009   tubulin, gamma 1 
TUBB4                 0.009   tubulin, beta 4 
TMEM149               0.007   transmembrane protein 149 
FRAS1                 0.007   Fraser syndrome 1 
TUBE1                 0.006   tubulin, epsilon 1 
TUBB4Q                0.006   tubulin, beta polypeptide 4, member Q 
LOC100294067          0.006   PREDICTED: similar to rCG47812 
NACC2                 0.006   BTB (POZ) domain containing 14A 
ICK                   0.005   intestinal cell kinase 
ICK                   0.005   intestinal cell kinase 
HIPK3                 0.005   homeodomain interacting protein kinase 3 isoform 2 ...
HIPK3                 0.005   homeodomain interacting protein kinase 3 isoform 1 ...
EIF4G3                0.005   eukaryotic translation initiation factor 4 gamma, 3 ...
GATA3                 0.005   GATA binding protein 3 isoform 1 
GATA3                 0.005   GATA binding protein 3 isoform 2 
KIAA0556              0.004   hypothetical protein LOC23247 
ZAN                   0.004   zonadhesin isoform 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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