TUBE1 36087

Name: TUBE1	Sequence: fasta or formatted (475aa)		NCBI GI: 7705915
Description: tubulin, epsilon 1		Referenced in: Tubulins and Microtubules
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.3 25 2 C cysteine 2.5 12 2 D aspartate 5.9 28 2 E glutamate 5.1 24 2 F phenylalanine 4.4 21 2 G glycine 6.1 29 3 H histidine 2.9 14 2 I isoleucine 5.5 26 2 K lysine 5.9 28 3 L leucine 11.8 56 3 M methionine 3.2 15 1 N asparagine 5.1 24 2 P proline 4.0 19 2 Q glutamine 4.6 22 1 R arginine 3.8 18 2 S serine 9.3 44 3 T threonine 4.2 20 2 V valine 7.4 35 3 W tryptophan 0.8 4 1 Y tyrosine 2.3 11 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 tubulin, epsilon 1 TUBB8 0.260 tubulin, beta 8 TUBB 0.254 tubulin, beta TUBB2A 0.253 tubulin, beta 2 TUBB4 0.253 tubulin, beta 4 TUBB2C 0.253 tubulin, beta, 2 TUBB2B 0.252 tubulin, beta 2B TUBB6 0.250 tubulin, beta 6 TUBB3 0.248 tubulin, beta, 4 TUBB1 0.237 beta tubulin 1, class VI TUBB4Q 0.236 tubulin, beta polypeptide 4, member Q TUBA4A 0.226 tubulin, alpha 4a TUBA8 0.225 tubulin, alpha 8 TUBA1C 0.223 tubulin alpha 6 TUBA1B 0.223 tubulin, alpha, ubiquitous TUBA1A 0.221 tubulin, alpha 1a TUBA3D 0.221 tubulin, alpha 3d TUBA3C 0.221 tubulin, alpha 3c TUBA3E 0.213 tubulin, alpha 3e TUBAL3 0.211 tubulin, alpha-like 3 TUBG1 0.157 tubulin, gamma 1 TUBG2 0.156 tubulin, gamma 2 TUBD1 0.117 delta-tubulin LOC100130736 0.072 PREDICTED: similar to tubulin, beta 5 LOC100130736 0.072 PREDICTED: similar to tubulin, beta 5 LOC442434 0.037 PREDICTED: similar to hCG1784562 LOC442434 0.037 PREDICTED: similar to hCG1784562 LOC442434 0.037 PREDICTED: similar to hCG1784562 CNP 0.008 2',3'-cyclic nucleotide 3' phosphodiesterase MSTO1 0.008 misato Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.