TUBB1 3481

Name: TUBB1	Sequence: fasta or formatted (451aa)		NCBI GI: 13562114
Description: beta tubulin 1, class VI		Referenced in: Tubulins and Microtubules
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.5 34 2 C cysteine 2.2 10 1 D aspartate 4.9 22 1 E glutamate 8.2 37 2 F phenylalanine 4.9 22 2 G glycine 7.5 34 3 H histidine 2.9 13 1 I isoleucine 5.5 25 1 K lysine 3.3 15 1 L leucine 8.0 36 2 M methionine 3.8 17 1 N asparagine 5.3 24 2 P proline 3.8 17 2 Q glutamine 4.7 21 2 R arginine 5.1 23 2 S serine 6.9 31 2 T threonine 4.9 22 2 V valine 6.9 31 2 W tryptophan 0.9 4 1 Y tyrosine 2.9 13 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 beta tubulin 1, class VI TUBB2C 0.796 tubulin, beta, 2 TUBB 0.796 tubulin, beta TUBB3 0.795 tubulin, beta, 4 TUBB2B 0.795 tubulin, beta 2B TUBB4 0.792 tubulin, beta 4 TUBB2A 0.791 tubulin, beta 2 TUBB6 0.786 tubulin, beta 6 TUBB8 0.780 tubulin, beta 8 TUBB4Q 0.700 tubulin, beta polypeptide 4, member Q TUBA1B 0.369 tubulin, alpha, ubiquitous TUBA8 0.367 tubulin, alpha 8 TUBA1A 0.367 tubulin, alpha 1a TUBA3D 0.367 tubulin, alpha 3d TUBA3C 0.367 tubulin, alpha 3c TUBA4A 0.366 tubulin, alpha 4a TUBA1C 0.366 tubulin alpha 6 LOC100130736 0.363 PREDICTED: similar to tubulin, beta 5 LOC100130736 0.363 PREDICTED: similar to tubulin, beta 5 TUBA3E 0.358 tubulin, alpha 3e TUBAL3 0.345 tubulin, alpha-like 3 TUBG1 0.291 tubulin, gamma 1 TUBG2 0.289 tubulin, gamma 2 TUBE1 0.247 tubulin, epsilon 1 LOC442434 0.137 PREDICTED: similar to hCG1784562 LOC442434 0.137 PREDICTED: similar to hCG1784562 LOC442434 0.137 PREDICTED: similar to hCG1784562 TUBD1 0.124 delta-tubulin LOC100130736 0.119 PREDICTED: similar to hCG1647990 LOC100292044 0.061 PREDICTED: similar to hCG1642465 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.