Guide to the Human Genome
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Name: TUBG2 Sequence: fasta or formatted (451aa) NCBI GI: 7706751
Description:

tubulin, gamma 2

Referenced in:

Tubulins and Microtubules

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3         24           2
 C cysteine            1.3          6           1
 D aspartate           6.4         29           2
 E glutamate           6.0         27           2
 F phenylalanine       4.0         18           2
 G glycine             6.0         27           3
 H histidine           2.9         13           1
 I isoleucine          6.9         31           2
 K lysine              3.5         16           2
 L leucine             9.8         44           2
 M methionine          2.4         11           2
 N asparagine          4.7         21           2
 P proline             4.7         21           1
 Q glutamine           6.0         27           2
 R arginine            6.0         27           2
 S serine              8.0         36           2
 T threonine           5.8         26           3
 V valine              5.8         26           3
 W tryptophan          0.9          4           1
 Y tyrosine            3.8         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tubulin, gamma 2 
TUBG1                 0.982   tubulin, gamma 1 
LOC100133673          0.320   PREDICTED: similar to tubulin, gamma 1 
TUBB2C                0.299   tubulin, beta, 2 
TUBB2B                0.298   tubulin, beta 2B 
TUBB                  0.298   tubulin, beta 
TUBB8                 0.297   tubulin, beta 8 
TUBB2A                0.297   tubulin, beta 2 
TUBB3                 0.296   tubulin, beta, 4 
TUBB4                 0.296   tubulin, beta 4 
TUBB6                 0.295   tubulin, beta 6 
TUBB1                 0.290   beta tubulin 1, class VI 
TUBB4Q                0.267   tubulin, beta polypeptide 4, member Q 
TUBA4A                0.238   tubulin, alpha 4a 
TUBA1C                0.236   tubulin alpha 6 
TUBA1B                0.235   tubulin, alpha, ubiquitous 
TUBA1A                0.233   tubulin, alpha 1a 
TUBA3D                0.233   tubulin, alpha 3d 
TUBA3C                0.233   tubulin, alpha 3c 
TUBA3E                0.229   tubulin, alpha 3e 
TUBA8                 0.226   tubulin, alpha 8 
TUBAL3                0.224   tubulin, alpha-like 3 
TUBE1                 0.164   tubulin, epsilon 1 
TUBD1                 0.151   delta-tubulin 
LOC100130736          0.098   PREDICTED: similar to tubulin, beta 5 
LOC100130736          0.098   PREDICTED: similar to tubulin, beta 5 
LOC100130736          0.016   PREDICTED: similar to hCG1647990 
LOC442434             0.015   PREDICTED: similar to hCG1784562 
LOC442434             0.015   PREDICTED: similar to hCG1784562 
LOC442434             0.015   PREDICTED: similar to hCG1784562 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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