TUBB 25053

Name: TUBB	Sequence: fasta or formatted (444aa)		NCBI GI: 29788785
Description: tubulin, beta		Referenced in: Tubulins and Microtubules
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.8 30 2 C cysteine 1.8 8 1 D aspartate 5.9 26 1 E glutamate 8.1 36 4 F phenylalanine 5.2 23 2 G glycine 7.9 35 3 H histidine 2.3 10 1 I isoleucine 4.1 18 1 K lysine 3.4 15 1 L leucine 7.2 32 2 M methionine 3.8 17 2 N asparagine 4.7 21 2 P proline 4.5 20 2 Q glutamine 4.7 21 2 R arginine 5.0 22 2 S serine 5.9 26 2 T threonine 7.0 31 2 V valine 7.4 33 2 W tryptophan 0.9 4 1 Y tyrosine 3.6 16 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 tubulin, beta TUBB2C 0.981 tubulin, beta, 2 TUBB4 0.967 tubulin, beta 4 TUBB2B 0.965 tubulin, beta 2B TUBB2A 0.958 tubulin, beta 2 TUBB3 0.931 tubulin, beta, 4 TUBB6 0.913 tubulin, beta 6 TUBB8 0.910 tubulin, beta 8 TUBB4Q 0.834 tubulin, beta polypeptide 4, member Q TUBB1 0.803 beta tubulin 1, class VI LOC100130736 0.439 PREDICTED: similar to tubulin, beta 5 LOC100130736 0.439 PREDICTED: similar to tubulin, beta 5 TUBA1C 0.402 tubulin alpha 6 TUBA1B 0.402 tubulin, alpha, ubiquitous TUBA4A 0.401 tubulin, alpha 4a TUBA1A 0.399 tubulin, alpha 1a TUBA3D 0.399 tubulin, alpha 3d TUBA3C 0.399 tubulin, alpha 3c TUBA8 0.393 tubulin, alpha 8 TUBA3E 0.390 tubulin, alpha 3e TUBAL3 0.364 tubulin, alpha-like 3 TUBG1 0.302 tubulin, gamma 1 TUBG2 0.299 tubulin, gamma 2 TUBE1 0.268 tubulin, epsilon 1 LOC442434 0.185 PREDICTED: similar to hCG1784562 LOC442434 0.185 PREDICTED: similar to hCG1784562 LOC442434 0.185 PREDICTED: similar to hCG1784562 LOC100130736 0.156 PREDICTED: similar to hCG1647990 TUBD1 0.132 delta-tubulin LOC100292044 0.087 PREDICTED: similar to hCG1642465 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.