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Search of human proteins with 38788372
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|38788372 aquarius [Homo sapiens]
(1485 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|38788372 aquarius [Homo sapiens] 3006 0.0
gi|28626521 zinc finger, NFX1-type containing 1 [Homo sapiens] 121 6e-27
gi|18375673 regulator of nonsense transcripts 1 [Homo sapiens] 94 7e-19
gi|113722133 senataxin [Homo sapiens] 84 1e-15
gi|122937299 DNA replication helicase 2 homolog [Homo sapiens] 81 7e-15
gi|119392094 immunoglobulin mu binding protein 2 [Homo sapiens] 71 9e-12
gi|156105693 PPAR-alpha interacting complex protein 285 isoform ... 59 3e-08
gi|156105695 PPAR-alpha interacting complex protein 285 isoform ... 59 3e-08
gi|14251207 MOV10-like 1 [Homo sapiens] 51 7e-06
gi|54792138 helicase with zinc finger domain [Homo sapiens] 41 0.010
gi|194272168 Mov10, Moloney leukemia virus 10, homolog [Homo sap... 40 0.013
gi|14211540 Mov10, Moloney leukemia virus 10, homolog [Homo sapi... 40 0.013
gi|149773456 hypothetical protein LOC643314 [Homo sapiens] 39 0.037
gi|222418647 mucin 7, secreted precursor [Homo sapiens] 38 0.064
gi|222418649 mucin 7, secreted precursor [Homo sapiens] 38 0.064
gi|222418645 mucin 7, secreted precursor [Homo sapiens] 38 0.064
gi|38026934 Rho guanine nucleotide exchange factor (GEF) 11 isof... 37 0.19
gi|4506879 selectin P ligand [Homo sapiens] 37 0.19
gi|217272816 RAD51-like 3 isoform 6 [Homo sapiens] 37 0.19
gi|33946327 nucleoporin 214kDa [Homo sapiens] 36 0.24
gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens] 36 0.24
gi|217035164 coiled-coil domain containing 27 [Homo sapiens] 36 0.24
gi|161019170 mucin 5AC [Homo sapiens] 36 0.32
gi|189181724 proteoglycan 4 isoform D [Homo sapiens] 36 0.32
gi|189181722 proteoglycan 4 isoform C [Homo sapiens] 36 0.32
gi|189181720 proteoglycan 4 isoform B [Homo sapiens] 36 0.32
gi|67190163 proteoglycan 4 isoform A [Homo sapiens] 36 0.32
gi|239749951 PREDICTED: similar to mucin 2 [Homo sapiens] 35 0.41
gi|217416415 RAD51-like 3 isoform 1 [Homo sapiens] 35 0.41
gi|27501458 CTF18, chromosome transmission fidelity factor 18 ho... 35 0.41
>gi|38788372 aquarius [Homo sapiens]
Length = 1485
Score = 3006 bits (7793), Expect = 0.0
Identities = 1485/1485 (100%), Positives = 1485/1485 (100%)
Query: 1 MAAPAQPKKIVAPTVSQINAEFVTQLACKYWAPHIKKKSPFDIKVIEDIYEKEIVKSRFA 60
MAAPAQPKKIVAPTVSQINAEFVTQLACKYWAPHIKKKSPFDIKVIEDIYEKEIVKSRFA
Sbjct: 1 MAAPAQPKKIVAPTVSQINAEFVTQLACKYWAPHIKKKSPFDIKVIEDIYEKEIVKSRFA 60
Query: 61 IRKIMLLEFSQYLENYLWMNYSPEVSSKAYLMSICCMVNEKFRENVPAWEIFKKKPDHFP 120
IRKIMLLEFSQYLENYLWMNYSPEVSSKAYLMSICCMVNEKFRENVPAWEIFKKKPDHFP
Sbjct: 61 IRKIMLLEFSQYLENYLWMNYSPEVSSKAYLMSICCMVNEKFRENVPAWEIFKKKPDHFP 120
Query: 121 FFFKHILKAALAETDGEFSLHEQTVLLLFLDHCFNSLEVDLIRSQVQQLISLPMWMGLQL 180
FFFKHILKAALAETDGEFSLHEQTVLLLFLDHCFNSLEVDLIRSQVQQLISLPMWMGLQL
Sbjct: 121 FFFKHILKAALAETDGEFSLHEQTVLLLFLDHCFNSLEVDLIRSQVQQLISLPMWMGLQL 180
Query: 181 ARLELELKKTPKLRKFWNLIKKNDEKMDPEAREQAYQERRFLSQLIQKFISVLKSVPLSE 240
ARLELELKKTPKLRKFWNLIKKNDEKMDPEAREQAYQERRFLSQLIQKFISVLKSVPLSE
Sbjct: 181 ARLELELKKTPKLRKFWNLIKKNDEKMDPEAREQAYQERRFLSQLIQKFISVLKSVPLSE 240
Query: 241 PVTMDKVHYCERFIELMIDLEALLPTRRWFNTILDDSHLLVHCYLSNLVRREEDGHLFSQ 300
PVTMDKVHYCERFIELMIDLEALLPTRRWFNTILDDSHLLVHCYLSNLVRREEDGHLFSQ
Sbjct: 241 PVTMDKVHYCERFIELMIDLEALLPTRRWFNTILDDSHLLVHCYLSNLVRREEDGHLFSQ 300
Query: 301 LLDMLKFYTGFEINDQTGNALTENEMTTIHYDRITSLQRAAFAHFPELYDFALSNVAEVD 360
LLDMLKFYTGFEINDQTGNALTENEMTTIHYDRITSLQRAAFAHFPELYDFALSNVAEVD
Sbjct: 301 LLDMLKFYTGFEINDQTGNALTENEMTTIHYDRITSLQRAAFAHFPELYDFALSNVAEVD 360
Query: 361 TRESLVKFFGPLSSNTLHQVASYLCLLPTLPKNEDTTFDKEFLLELLVSRHERRISQIQQ 420
TRESLVKFFGPLSSNTLHQVASYLCLLPTLPKNEDTTFDKEFLLELLVSRHERRISQIQQ
Sbjct: 361 TRESLVKFFGPLSSNTLHQVASYLCLLPTLPKNEDTTFDKEFLLELLVSRHERRISQIQQ 420
Query: 421 LNQMPLYPTEKIIWDENIVPTEYYSGEGCLALPKLNLQFLTLHDYLLRNFNLFRLESTYE 480
LNQMPLYPTEKIIWDENIVPTEYYSGEGCLALPKLNLQFLTLHDYLLRNFNLFRLESTYE
Sbjct: 421 LNQMPLYPTEKIIWDENIVPTEYYSGEGCLALPKLNLQFLTLHDYLLRNFNLFRLESTYE 480
Query: 481 IRQDIEDSVSRMKPWQSEYGGVVFGGWARMAQPIVAFTVVEVAKPNIGENWPTRVRADVT 540
IRQDIEDSVSRMKPWQSEYGGVVFGGWARMAQPIVAFTVVEVAKPNIGENWPTRVRADVT
Sbjct: 481 IRQDIEDSVSRMKPWQSEYGGVVFGGWARMAQPIVAFTVVEVAKPNIGENWPTRVRADVT 540
Query: 541 INLNVRDHIKDEWEGLRKHDVCFLITVRPTKPYGTKFDRRRPFIEQVGLVYVRGCEIQGM 600
INLNVRDHIKDEWEGLRKHDVCFLITVRPTKPYGTKFDRRRPFIEQVGLVYVRGCEIQGM
Sbjct: 541 INLNVRDHIKDEWEGLRKHDVCFLITVRPTKPYGTKFDRRRPFIEQVGLVYVRGCEIQGM 600
Query: 601 LDDKGRVIEDGPEPRPNLRGESRTFRVFLDPNQYQQDMTNTIQNGAEDVYETFNIIMRRK 660
LDDKGRVIEDGPEPRPNLRGESRTFRVFLDPNQYQQDMTNTIQNGAEDVYETFNIIMRRK
Sbjct: 601 LDDKGRVIEDGPEPRPNLRGESRTFRVFLDPNQYQQDMTNTIQNGAEDVYETFNIIMRRK 660
Query: 661 PKENNFKAVLETIRNLMNTDCVVPDWLHDIILGYGDPSSAHYSKMPNQIATLDFNDTFLS 720
PKENNFKAVLETIRNLMNTDCVVPDWLHDIILGYGDPSSAHYSKMPNQIATLDFNDTFLS
Sbjct: 661 PKENNFKAVLETIRNLMNTDCVVPDWLHDIILGYGDPSSAHYSKMPNQIATLDFNDTFLS 720
Query: 721 IEHLKASFPGHNVKVTVEDPALQIPPFRITFPVRSGKGKKRKDADVEDEDTEEAKTLIVE 780
IEHLKASFPGHNVKVTVEDPALQIPPFRITFPVRSGKGKKRKDADVEDEDTEEAKTLIVE
Sbjct: 721 IEHLKASFPGHNVKVTVEDPALQIPPFRITFPVRSGKGKKRKDADVEDEDTEEAKTLIVE 780
Query: 781 PHVIPNRGPYPYNQPKRNTIQFTHTQIEAIRAGMQPGLTMVVGPPGTGKTDVAVQIISNI 840
PHVIPNRGPYPYNQPKRNTIQFTHTQIEAIRAGMQPGLTMVVGPPGTGKTDVAVQIISNI
Sbjct: 781 PHVIPNRGPYPYNQPKRNTIQFTHTQIEAIRAGMQPGLTMVVGPPGTGKTDVAVQIISNI 840
Query: 841 YHNFPEQRTLIVTHSNQALNQLFEKIMALDIDERHLLRLGHGEEELETEKDFSRYGRVNY 900
YHNFPEQRTLIVTHSNQALNQLFEKIMALDIDERHLLRLGHGEEELETEKDFSRYGRVNY
Sbjct: 841 YHNFPEQRTLIVTHSNQALNQLFEKIMALDIDERHLLRLGHGEEELETEKDFSRYGRVNY 900
Query: 901 VLARRIELLEEVKRLQKSLGVPGDASYTCETAGYFFLYQVMSRWEEYISKVKNKGSTLPD 960
VLARRIELLEEVKRLQKSLGVPGDASYTCETAGYFFLYQVMSRWEEYISKVKNKGSTLPD
Sbjct: 901 VLARRIELLEEVKRLQKSLGVPGDASYTCETAGYFFLYQVMSRWEEYISKVKNKGSTLPD 960
Query: 961 VTEVSTFFPFHEYFANAPQPIFKGRSYEEDMEIAEGCFRHIKKIFTQLEEFRASELLRSG 1020
VTEVSTFFPFHEYFANAPQPIFKGRSYEEDMEIAEGCFRHIKKIFTQLEEFRASELLRSG
Sbjct: 961 VTEVSTFFPFHEYFANAPQPIFKGRSYEEDMEIAEGCFRHIKKIFTQLEEFRASELLRSG 1020
Query: 1021 LDRSKYLLVKEAKIIAMTCTHAALKRHDLVKLGFKYDNILMEEAAQILEIETFIPLLLQN 1080
LDRSKYLLVKEAKIIAMTCTHAALKRHDLVKLGFKYDNILMEEAAQILEIETFIPLLLQN
Sbjct: 1021 LDRSKYLLVKEAKIIAMTCTHAALKRHDLVKLGFKYDNILMEEAAQILEIETFIPLLLQN 1080
Query: 1081 PQDGFSRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRVGVPTVDLDAQGRAR 1140
PQDGFSRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRVGVPTVDLDAQGRAR
Sbjct: 1081 PQDGFSRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRVGVPTVDLDAQGRAR 1140
Query: 1141 ASLCNLYNWRYKNLGNLPHVQLLPEFSTANAGLLYDFQLINVEDFQGVGESEPNPYFYQN 1200
ASLCNLYNWRYKNLGNLPHVQLLPEFSTANAGLLYDFQLINVEDFQGVGESEPNPYFYQN
Sbjct: 1141 ASLCNLYNWRYKNLGNLPHVQLLPEFSTANAGLLYDFQLINVEDFQGVGESEPNPYFYQN 1200
Query: 1201 LGEAEYVVALFMYMCLLGYPADKISILTTYNGQKHLIRDIINRRCGNNPLIGRPNKVTTV 1260
LGEAEYVVALFMYMCLLGYPADKISILTTYNGQKHLIRDIINRRCGNNPLIGRPNKVTTV
Sbjct: 1201 LGEAEYVVALFMYMCLLGYPADKISILTTYNGQKHLIRDIINRRCGNNPLIGRPNKVTTV 1260
Query: 1261 DRFQGQQNDYILLSLVRTRAVGHLRDVRRLVVAMSRARLGLYIFARVSLFQNCFELTPAF 1320
DRFQGQQNDYILLSLVRTRAVGHLRDVRRLVVAMSRARLGLYIFARVSLFQNCFELTPAF
Sbjct: 1261 DRFQGQQNDYILLSLVRTRAVGHLRDVRRLVVAMSRARLGLYIFARVSLFQNCFELTPAF 1320
Query: 1321 SQLTARPLHLHIIPTEPFPTTRKNGERPSHEVQIIKNMPQMANFVYNMYMHLIQTTHHYH 1380
SQLTARPLHLHIIPTEPFPTTRKNGERPSHEVQIIKNMPQMANFVYNMYMHLIQTTHHYH
Sbjct: 1321 SQLTARPLHLHIIPTEPFPTTRKNGERPSHEVQIIKNMPQMANFVYNMYMHLIQTTHHYH 1380
Query: 1381 QTLLQLPPAMVEEGEEVQNQETELETEEEAMTVQADIIPSPTDTSCRQETPAFQTDTTPS 1440
QTLLQLPPAMVEEGEEVQNQETELETEEEAMTVQADIIPSPTDTSCRQETPAFQTDTTPS
Sbjct: 1381 QTLLQLPPAMVEEGEEVQNQETELETEEEAMTVQADIIPSPTDTSCRQETPAFQTDTTPS 1440
Query: 1441 ETGATSTPEAIPALSETTPTVVGAVSAPAEANTPQDATSAPEETK 1485
ETGATSTPEAIPALSETTPTVVGAVSAPAEANTPQDATSAPEETK
Sbjct: 1441 ETGATSTPEAIPALSETTPTVVGAVSAPAEANTPQDATSAPEETK 1485
>gi|28626521 zinc finger, NFX1-type containing 1 [Homo sapiens]
Length = 1918
Score = 121 bits (303), Expect = 6e-27
Identities = 99/313 (31%), Positives = 155/313 (49%), Gaps = 28/313 (8%)
Query: 1002 KKIFTQLEEFRASELLRSGLDRSKYL-LVKEAKIIAMTCTHAALKRHDLVKLGFKYDNIL 1060
+KI + ++R S + L + L ++K+A+++ MT T AA R L K+ + ++
Sbjct: 947 RKILSYERQYRTSAERMAELRLQEDLHILKDAQVVGMTTTGAAKYRQILQKVEPRI--VI 1004
Query: 1061 MEEAAQILEIETFIPLLLQNPQDGFSRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLF 1120
+EEAA++LE T L + I+IGDH QL P K N+E SLF
Sbjct: 1005 VEEAAEVLEAHTIATLS--------KACQHLILIGDHQQLRPSANVYDLAKNFNLEVSLF 1056
Query: 1121 TRFVRVGVPTVDLDAQGRARASLCNLYNWR-YKNLGNLPHVQLLPEFSTANAGLLYDFQL 1179
R V+V +P V L+ Q R + L Y++L N P V + ++ L +
Sbjct: 1057 ERLVKVNIPFVRLNYQHRMCPEIARLLTPHIYQDLENHPSVLKYEKIKGVSSNLFFVEHN 1116
Query: 1180 INVEDFQGVGESEPNPYFYQNLGEAEYVVALFMYMCLLGYPADKISILTTYNGQKHLIRD 1239
++ Q G+S +QN EA +VV L Y Y +I+ILTTY GQ +R
Sbjct: 1117 FPEQEIQ-EGKS------HQNQHEAHFVVELCKYFLCQEYLPSQITILTTYTGQLFCLRK 1169
Query: 1240 IINRRCGNNPLIGRPNKVTTVDRFQGQQNDYILLSLVRTR---AVGHLRDVRRLVVAMSR 1296
++ + +V VD++QG++ND ILLSLVR+ VG L+ R+ VA+SR
Sbjct: 1170 LMPAKTFAGV------RVHVVDKYQGEENDIILLSLVRSNQEGKVGFLQISNRICVALSR 1223
Query: 1297 ARLGLYIFARVSL 1309
A+ G+Y + +
Sbjct: 1224 AKKGMYCIGNMQM 1236
Score = 48.5 bits (114), Expect = 5e-05
Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 16/113 (14%)
Query: 791 PYNQPKRNTIQFTHTQIEAIRAGMQPGLTMVVGPPGTGKTDVAVQIISNIYHN------- 843
P P + ++ +Q+EA++ + L ++ GPPGTGKT V ++I+ + N
Sbjct: 587 PGQWPSKEALKLDDSQMEALQFALTRELAIIQGPPGTGKTYVGLKIVQALLTNESVWQIS 646
Query: 844 ---FPEQRTLIVTHSNQALNQLFEKIMALDIDERHLLRLGHGEEELETEKDFS 893
FP L+V ++N AL+Q E I + + ++R+G G E K F+
Sbjct: 647 LQKFP---ILVVCYTNHALDQFLEGI--YNCQKTSIVRVG-GRSNSEILKQFT 693
>gi|18375673 regulator of nonsense transcripts 1 [Homo sapiens]
Length = 1118
Score = 94.4 bits (233), Expect = 7e-19
Identities = 86/287 (29%), Positives = 136/287 (47%), Gaps = 31/287 (10%)
Query: 1028 LVKEAKIIAMTCTHAALKRHDLVKLGFKYDNILMEEAAQILEIETFIPLLLQNPQDGFSR 1087
L+ A +I TC A R L K+ F+ +IL++E+ Q E E +P++L
Sbjct: 606 LLMNADVICCTCVGAGDPR--LAKMQFR--SILIDESTQATEPECMVPVVLG-------- 653
Query: 1088 LKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRVGVPTVDLDAQGRARASLCNLY 1147
K+ I++GDH QL PV+ K + + QSLF R V +G+ + L Q R +L
Sbjct: 654 AKQLILVGDHCQLGPVVMCKKAAK-AGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFP 712
Query: 1148 NWRYKNLGNLPHVQLLPEFSTANAGLL--YDFQLINVED------FQGVGESEPNPYFYQ 1199
+ N+ + L TA + +DFQ + QG E + Y
Sbjct: 713 S-------NIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYL 765
Query: 1200 NLGEAEYVVALFMYMCLLGYPADKISILTTYNGQKHLIRDIINRRCGNNPLIGRPNKVTT 1259
N EA V + + G D+I I+T Y GQ+ + + + + + ++ +
Sbjct: 766 NRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIAS 825
Query: 1260 VDRFQGQQNDYILLSLVRT---RAVGHLRDVRRLVVAMSRARLGLYI 1303
VD FQG++ D+I+LS VR + +G L D RRL VA++RAR G+ I
Sbjct: 826 VDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVII 872
Score = 47.4 bits (111), Expect = 1e-04
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 9/78 (11%)
Query: 795 PKRNTIQ----FTHTQIEAIRAGMQPGLTMVVGPPGTGKTDVAVQIISNIYH--NFPEQR 848
PKR T Q H+Q+ A++ +Q L+++ GPPGTGKT + I+ ++ N P
Sbjct: 460 PKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGP--- 516
Query: 849 TLIVTHSNQALNQLFEKI 866
L+ SN A++QL EKI
Sbjct: 517 VLVCAPSNIAVDQLTEKI 534
>gi|113722133 senataxin [Homo sapiens]
Length = 2677
Score = 84.0 bits (206), Expect = 1e-15
Identities = 119/563 (21%), Positives = 231/563 (41%), Gaps = 107/563 (19%)
Query: 792 YNQPKRNTIQFTHTQIEAIRAGMQPGLTMVVGPPGTGKTDVAVQII-------------- 837
+N+ ++ I+ + ++ + + ++ GPPGTGK+ V ++
Sbjct: 1934 FNEDQKKAIETAYAMVK--HSPSVAKICLIHGPPGTGKSKTIVGLLYRLLTENQRKGHSD 1991
Query: 838 SNIYHNFPEQRTLIVTHSNQALNQLFEKIMALDIDERHLLRLGHGEEELETEKDFSRYGR 897
N + R L+ SN A+++L +KI+ L E+ + + G
Sbjct: 1992 ENSNAKIKQNRVLVCAPSNAAVDELMKKII-----------LEFKEKCKDKKNPLGNCGD 2040
Query: 898 VNYVLARRIELLEEVKRLQKSLGVPGDASYTCETAGYFFLYQVMSRWEEYISKVKNKGST 957
+N V LG + S E + QV R + K S
Sbjct: 2041 INLV----------------RLGP--EKSINSEVLKFSLDSQVNHRMK------KELPSH 2076
Query: 958 LPDVTEVSTFFPFHEYFANAPQPIFKGRSYEEDMEIAEGCFRHIKKIFTQLEEFRAS-EL 1016
+ + + F + + + + +G + E+ E +I K+ + +E + +
Sbjct: 2077 VQAMHKRKEFLDYQLDELSRQRALCRGGREIQRQELDE----NISKVSKERQELASKIKE 2132
Query: 1017 LRSGLDRSKYLLVKEAKIIAMTCTHAA---LKRHDLVKLGFKYDNILMEEAAQILEIETF 1073
++ +++ +++ E+ II T + + L+ + G + ++++EA Q EIET
Sbjct: 2133 VQGRPQKTQSIIILESHIICCTLSTSGGLLLESAFRGQGGVPFSCVIVDEAGQSCEIETL 2192
Query: 1074 IPLLLQNPQDGFSRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRV------- 1126
PL+ R + I++GD QLPP + +M Q+Y +QS+ RF R+
Sbjct: 2193 TPLI--------HRCNKLILVGDPKQLPPTVISMKAQEYG-YDQSMMARFCRLLEENVEH 2243
Query: 1127 ----GVPTVDLDAQGRARASLCNLYNWRYKNLGNLPHVQLLPEFSTANAGLLYDFQLINV 1182
+P + L Q R +C L+ Y NL + ++ + + +V
Sbjct: 2244 NMISRLPILQLTVQYRMHPDIC-LFPSNYVYNRNLKTNRQTEAIRCSSDWPFQPYLVFDV 2302
Query: 1183 EDFQGVGESEPNPYFYQNLGEAEYVVALFMYMCLLGYPADK--------ISILTTYNGQK 1234
D G + Y N+ E + V+ + + DK I I+T Y QK
Sbjct: 2303 GD----GSERRDNDSYINVQEIKLVMEIIKLI------KDKRKDVSFRNIGIITHYKAQK 2352
Query: 1235 HLIRDIINRRCGNNPLIGRPNKVTTVDRFQGQQNDYILLSLVRTR----AVGHLRDVRRL 1290
+I+ +++ P +V TVD FQG+Q D ++++ VR ++G L ++RL
Sbjct: 2353 TMIQKDLDKEFDRKG----PAEVDTVDAFQGRQKDCVIVTCVRANSIQGSIGFLASLQRL 2408
Query: 1291 VVAMSRARLGLYIFARV-SLFQN 1312
V ++RA+ L+I + +L +N
Sbjct: 2409 NVTITRAKYSLFILGHLRTLMEN 2431
>gi|122937299 DNA replication helicase 2 homolog [Homo sapiens]
Length = 1146
Score = 81.3 bits (199), Expect = 7e-15
Identities = 97/348 (27%), Positives = 152/348 (43%), Gaps = 60/348 (17%)
Query: 1001 IKKIFTQLEEFRASELLRSGLDRSKYLLVK---EAKIIAMTC---THAALKRHDLVKLGF 1054
I+K+ +++F E+ RS +S LL + I+A TC H R
Sbjct: 788 IQKVHPAIQQFTEQEICRSKSIKSLALLEELYNSQLIVATTCMGINHPIFSRKI------ 841
Query: 1055 KYDNILMEEAAQILEIETFIPLLLQNPQDGFSRLKRWIMIGDHHQLPPVIKNMAFQKYSN 1114
+D +++EA+QI + PL FSR R++++GDH QLPP++ N +
Sbjct: 842 -FDFCIVDEASQISQPICLGPLF-------FSR--RFVLVGDHQQLPPLVLNREARALG- 890
Query: 1115 MEQSLFTRFVRVGVPTVDLDAQGRARASLCNLYN-WRYK---------------NLGNLP 1158
M +SLF R + V L Q R + + +L N Y+ NL +
Sbjct: 891 MSESLFKRLEQNKSAVVQLTVQYRMNSKIMSLSNKLTYEGKLECGSDKVANAVINLRHFK 950
Query: 1159 HVQLLPEFS---TANAGLLYDFQLINVEDFQGVGESEPNPYFYQ-----NLGEAEYVVAL 1210
V+L EF + N L+ F+ N F + P P + N+ EA+ +V L
Sbjct: 951 DVKLELEFYADYSDNPWLMGVFEPNNPVCFLNT-DKVPAPEQVEKGGVSNVTEAKLIVFL 1009
Query: 1211 FMYMCLLGYPADKISILTTYNGQKHLIRDIINRRCGNNPLIGRPNKVTTVDRFQGQQNDY 1270
G I I+ Y Q +I D++ R G +V TVD++QG+
Sbjct: 1010 TSIFVKAGCSPSDIGIIAPYRQQLKIINDLLARSIGMV-------EVNTVDKYQGRDKSI 1062
Query: 1271 ILLSLVRTRAVGH----LRDVRRLVVAMSRARLGLYIFARVSLFQNCF 1314
+L+S VR+ G L+D RRL VA++RA+ L + V NC+
Sbjct: 1063 VLVSFVRSNKDGTVGELLKDWRRLNVAITRAKHKLILLGCVPSL-NCY 1109
Score = 31.2 bits (69), Expect = 7.8
Identities = 25/99 (25%), Positives = 46/99 (46%), Gaps = 7/99 (7%)
Query: 819 TMVVGPPGTGKTDVAVQIISNIYH-NFPEQRTLIVTHSNQALNQLFEKIMALDIDERHLL 877
T++VG PGTGKT ++ +Y F L+ ++++ A++ + K+ I L
Sbjct: 730 TLIVGMPGTGKTTTICTLVRILYACGF---SVLLTSYTHSAVDNILLKLAKFKIG---FL 783
Query: 878 RLGHGEEELETEKDFSRYGRVNYVLARRIELLEEVKRLQ 916
RLG ++ + F+ + + LLEE+ Q
Sbjct: 784 RLGQIQKVHPAIQQFTEQEICRSKSIKSLALLEELYNSQ 822
>gi|119392094 immunoglobulin mu binding protein 2 [Homo sapiens]
Length = 993
Score = 70.9 bits (172), Expect = 9e-12
Identities = 130/527 (24%), Positives = 206/527 (39%), Gaps = 136/527 (25%)
Query: 798 NTIQFTHTQIEAIRAGMQPGLTMVVGPPGTGKTDVAVQIISNIYHNFPEQRTLIVTHSNQ 857
NT T + + A Q L ++ GPPGTGKT V+II + L SN
Sbjct: 189 NTCLDTSQKEAVLFALSQKELAIIHGPPGTGKTTTVVEIILQAVKQ--GLKVLCCAPSNI 246
Query: 858 ALNQLFEKIMALDIDERHLLRLGHGEEELETEKDFSRYGRVNYVLARRIELLEEVKRLQK 917
A++ L E+ L + ++ +LRLGH LE+ + S ++ VLAR
Sbjct: 247 AVDNLVER---LALCKQRILRLGHPARLLESIQQHS----LDAVLAR------------- 286
Query: 918 SLGVPGDASYTCETAGYFFLYQVMSRWEEYISKVKNKGSTLPDVTEVSTFFPFHEYFANA 977
D++ Q+++ + I +V K D E S F
Sbjct: 287 -----SDSA------------QIVADIRKDIDQVFVKNKKTQDKREKSNF---------- 319
Query: 978 PQPIFKGRSYEEDMEIAEGCFRHIKKIFTQLEEFRASELLRSGLDRSKYLLVKEAKIIAM 1037
IK + +L+E + +L S + A ++
Sbjct: 320 --------------------RNEIKLLRKELKEREEAAMLES---------LTSANVVLA 350
Query: 1038 TCTHAALKRHDLVKLGFKYDNIL-MEEAAQILEIETFIPLLLQNPQDGFSRLKRWIMIGD 1096
T T A+ L L Y +++ ++E AQ LE +IPLL + ++ I+ GD
Sbjct: 351 TNTGASAD-GPLKLLPESYFDVVVIDECAQALEASCWIPLL---------KARKCILAGD 400
Query: 1097 HHQLPP-------VIKNMAFQKYSNMEQSLFTRFVRVGVPTVDLDAQGRARASLCNLYNW 1149
H QLPP + ++ + + R VR + Q R + +Y
Sbjct: 401 HKQLPPTTVSHKAALAGLSLSLMERLAEEYGARVVRTLTVQYRMH-QAIMRWASDTMYLG 459
Query: 1150 RYKN--------LGNLPHVQLLPE-------FSTANAGLLYDFQLINVEDFQGVGESEPN 1194
+ L +LP V E TA GL F+L ED Q G
Sbjct: 460 QLTAHSSVARHLLRDLPGVAATEETGVPLLLVDTAGCGL---FEL-EEEDEQSKG----- 510
Query: 1195 PYFYQNLGEAEYVVALFMYMCLLGYPADKISILTTYNGQKHLIRDIINRRCGNNPLIGRP 1254
N GE V + G PA I++++ YN Q L+R + R +P +
Sbjct: 511 -----NPGEVRLVSLHIQALVDAGVPARDIAVVSPYNLQVDLLRQSLVHR---HPEL--- 559
Query: 1255 NKVTTVDRFQGQQNDYILLSLVRTR---AVGHLRDVRRLVVAMSRAR 1298
++ +VD FQG++ + ++LS VR+ VG L + RR+ VA++RAR
Sbjct: 560 -EIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRRINVAVTRAR 605
>gi|156105693 PPAR-alpha interacting complex protein 285 isoform 1
[Homo sapiens]
Length = 2649
Score = 59.3 bits (142), Expect = 3e-08
Identities = 79/304 (25%), Positives = 128/304 (42%), Gaps = 44/304 (14%)
Query: 1033 KIIAMTCTHAALKRHDLVKLGFKYDNILMEEAAQILEIETFIPLLLQNPQDGFSRLKRWI 1092
++I TC+ AA ++ + IL++EA E ET IPL+ F + ++ +
Sbjct: 2335 EVILCTCSCAASASLKILDVR----QILVDEAGMATEPETLIPLVQ------FPQAEKVV 2384
Query: 1093 MIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRVGVPTVDLDAQGRARASLC-----NLY 1147
++GDH QL PV+KN Q +++SLF R+ LD Q R +C Y
Sbjct: 2385 LLGDHKQLRPVVKNERLQNL-GLDRSLFERYHE---DAHMLDTQYRMHEGICAFPSVAFY 2440
Query: 1148 NWRYKNLGNLPHVQLLPEFSTANAGLLYDFQLINVEDFQGVGESEPNPYFYQNLGEAEYV 1207
+ K L + + + + + E V E N NL E V
Sbjct: 2441 KSKLKTWQGLRRPPSVLGHAGKESCPVIFGHVQGHERSLLVSTDEGNENSKANLEEVAEV 2500
Query: 1208 VALFMYMCL--LGYPADKISILTTYNGQKHLIRDIINRRCGNNPLIGRPNKVTTVDRFQG 1265
V + + L P D I++LT YN Q I + R + G V+++ + QG
Sbjct: 2501 VRITKQLTLGRTVEPQD-IAVLTPYNAQASEISKALRR----EGIAG--VAVSSITKSQG 2553
Query: 1266 QQNDYILLSLVRTRA----------------VGHLRDVRRLVVAMSRARLGLYIFARVSL 1309
+ Y+L+S VRT A +G + D ++ VA++RA+ GL + L
Sbjct: 2554 SEWRYVLVSTVRTCAKSDLDQRPTKSWLKKFLGFVVDPNQVNVAVTRAQEGLCLIGDHLL 2613
Query: 1310 FQNC 1313
+ C
Sbjct: 2614 LRCC 2617
Score = 34.7 bits (78), Expect = 0.70
Identities = 16/43 (37%), Positives = 26/43 (60%)
Query: 805 TQIEAIRAGMQPGLTMVVGPPGTGKTDVAVQIISNIYHNFPEQ 847
+Q A+R ++ T++ GPPGTGKT V + I+ + + EQ
Sbjct: 2156 SQNVAVREALEKPFTVIQGPPGTGKTIVGLHIVFWFHKSNQEQ 2198
Score = 31.6 bits (70), Expect = 6.0
Identities = 28/93 (30%), Positives = 38/93 (40%), Gaps = 11/93 (11%)
Query: 776 TLIVEPHVIPNRG----PYPYNQPKRNTIQFTHTQIEAIRAGMQPG------LTMVVGPP 825
TL E V+P+ P P++ P A+ AG PG ++ GP
Sbjct: 487 TLPEEQLVVPDLPTCALPRPWSVPPLRRGNRKQELAVALIAGWGPGDGRRVPPLLIYGPF 546
Query: 826 GTGKTDVAVQIISNIYHNFPEQRTLIVTHSNQA 858
GTGKT + PE + LI TH+N A
Sbjct: 547 GTGKTYTLAMASLEVIRR-PETKVLICTHTNSA 578
>gi|156105695 PPAR-alpha interacting complex protein 285 isoform 2
[Homo sapiens]
Length = 2080
Score = 59.3 bits (142), Expect = 3e-08
Identities = 79/304 (25%), Positives = 128/304 (42%), Gaps = 44/304 (14%)
Query: 1033 KIIAMTCTHAALKRHDLVKLGFKYDNILMEEAAQILEIETFIPLLLQNPQDGFSRLKRWI 1092
++I TC+ AA ++ + IL++EA E ET IPL+ F + ++ +
Sbjct: 1766 EVILCTCSCAASASLKILDVR----QILVDEAGMATEPETLIPLVQ------FPQAEKVV 1815
Query: 1093 MIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRVGVPTVDLDAQGRARASLC-----NLY 1147
++GDH QL PV+KN Q +++SLF R+ LD Q R +C Y
Sbjct: 1816 LLGDHKQLRPVVKNERLQNL-GLDRSLFERYHE---DAHMLDTQYRMHEGICAFPSVAFY 1871
Query: 1148 NWRYKNLGNLPHVQLLPEFSTANAGLLYDFQLINVEDFQGVGESEPNPYFYQNLGEAEYV 1207
+ K L + + + + + E V E N NL E V
Sbjct: 1872 KSKLKTWQGLRRPPSVLGHAGKESCPVIFGHVQGHERSLLVSTDEGNENSKANLEEVAEV 1931
Query: 1208 VALFMYMCL--LGYPADKISILTTYNGQKHLIRDIINRRCGNNPLIGRPNKVTTVDRFQG 1265
V + + L P D I++LT YN Q I + R + G V+++ + QG
Sbjct: 1932 VRITKQLTLGRTVEPQD-IAVLTPYNAQASEISKALRR----EGIAG--VAVSSITKSQG 1984
Query: 1266 QQNDYILLSLVRTRA----------------VGHLRDVRRLVVAMSRARLGLYIFARVSL 1309
+ Y+L+S VRT A +G + D ++ VA++RA+ GL + L
Sbjct: 1985 SEWRYVLVSTVRTCAKSDLDQRPTKSWLKKFLGFVVDPNQVNVAVTRAQEGLCLIGDHLL 2044
Query: 1310 FQNC 1313
+ C
Sbjct: 2045 LRCC 2048
Score = 34.7 bits (78), Expect = 0.70
Identities = 16/43 (37%), Positives = 26/43 (60%)
Query: 805 TQIEAIRAGMQPGLTMVVGPPGTGKTDVAVQIISNIYHNFPEQ 847
+Q A+R ++ T++ GPPGTGKT V + I+ + + EQ
Sbjct: 1587 SQNVAVREALEKPFTVIQGPPGTGKTIVGLHIVFWFHKSNQEQ 1629
>gi|14251207 MOV10-like 1 [Homo sapiens]
Length = 1211
Score = 51.2 bits (121), Expect = 7e-06
Identities = 78/307 (25%), Positives = 122/307 (39%), Gaps = 55/307 (17%)
Query: 1033 KIIAMTCTHAALKRHDLVKLGFKYDNILMEEAAQILEIETFIPLLLQNPQDGFSRLKRWI 1092
+II TC+ + L V++G + ++ ++EA Q E E IPL L + G + +
Sbjct: 858 RIIITTCSSSGLFYQIGVRVGH-FTHVFVDEAGQASEPECLIPLGLMSDISG-----QIV 911
Query: 1093 MIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRVGVPTVDLDAQGRARASLCNLYNWRYK 1152
+ GD QL PVIK+ Y + S R + D +A G A L K
Sbjct: 912 LAGDPMQLGPVIKSRLAMAY-GLNVSFLERLMSRPAYQRDENAFGACGAHNPLLVTKLVK 970
Query: 1153 NLGNLPHVQLLPEFSTANAGLLYDFQLINVED---------------------FQGVGES 1191
N + + +LP + L Y +L D F GV S
Sbjct: 971 NYRSHEALLMLP------SRLFYHRELEVCADPTVVTSLLGWEKLPKKGFPLIFHGVRGS 1024
Query: 1192 EPNPYFYQNLGEAEYVVALFMYMCLLGY------PADKISILTTYNGQKHLIRDIINRRC 1245
E + V + Y CLL + A I ++T Y Q IR ++
Sbjct: 1025 EAREGKSPSWFNPAEAVQVLRYCCLLAHSISSQVSASDIGVITPYRKQVEKIRILLR--- 1081
Query: 1246 GNNPLIGRPNKVTTVDRFQGQQNDYILLSLVRTRA---------VGHLRDVRRLVVAMSR 1296
N L+ KV +V+ FQGQ+ I++S VR+ +G L + +R VA++R
Sbjct: 1082 -NVDLM--DIKVGSVEEFQGQEYLVIIISTVRSNEDRFEDDRYFLGFLSNSKRFNVAITR 1138
Query: 1297 ARLGLYI 1303
+ L +
Sbjct: 1139 PKALLIV 1145
Score = 36.2 bits (82), Expect = 0.24
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 820 MVVGPPGTGKTDVAVQIISNIYHNFPEQRTLIVTHSNQA 858
++ GPPGTGKT ++ + ++ P+ R L+ SN A
Sbjct: 767 ILFGPPGTGKTVTIIEAVLQVHFALPDSRILVCAPSNSA 805
>gi|54792138 helicase with zinc finger domain [Homo sapiens]
Length = 1942
Score = 40.8 bits (94), Expect = 0.010
Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 9/95 (9%)
Query: 1028 LVKEAKIIAMTCTHAALKRHDLVKLGFKYDNILMEEAAQILEIETFIPLLLQNPQDGFSR 1087
++K ++ T L + DL + GF + +IL++EAAQ +E ET +PL L ++
Sbjct: 762 ILKHRVVVVTLNTSQYLCQLDL-EPGF-FTHILLDEAAQAMECETIMPLALA------TQ 813
Query: 1088 LKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTR 1122
R ++ GDH QL P + + F + N+ SL R
Sbjct: 814 NTRIVLAGDHMQLSPFVYS-EFARERNLHVSLLDR 847
Score = 36.2 bits (82), Expect = 0.24
Identities = 25/74 (33%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Query: 785 PNRGPYPYNQPKRNTIQFTHTQIEAIRAGMQPGLTMVVGPPGTGKTDVAVQIISNIYHNF 844
PNR P+ N Q +Q +++GP GTGKT Q + +I
Sbjct: 630 PNRQWDEQLDPRLNAKQKEAVLAITTPLAIQLPPVLIIGPYGTGKTFTLAQAVKHILQQ- 688
Query: 845 PEQRTLIVTHSNQA 858
E R LI THSN A
Sbjct: 689 QETRILICTHSNSA 702
>gi|194272168 Mov10, Moloney leukemia virus 10, homolog [Homo sapiens]
Length = 1003
Score = 40.4 bits (93), Expect = 0.013
Identities = 72/286 (25%), Positives = 121/286 (42%), Gaps = 44/286 (15%)
Query: 1056 YDNILMEEAAQILEIETFIPLL-LQNPQDGFSRLKRWIMIGDHHQLPPVIKNMAFQK--- 1111
+ +I ++EA +E E+ + + L ++ + ++ GD QL PV+++ QK
Sbjct: 639 FTHIFIDEAGHCMEPESLVAIAGLMEVKETGDPGGQLVLAGDPRQLGPVLRSPLTQKHGL 698
Query: 1112 -YSNMEQSL-FTRFVRVGVPTVD------LDAQGRARASLCNLYNWRYKNLGNLPHVQLL 1163
YS +E+ L + + G D L R+ ++ ++ N Y G L +
Sbjct: 699 GYSLLERLLTYNSLYKKGPDGYDPQFITKLLRNYRSHPTILDIPNQLYYE-GELQACADV 757
Query: 1164 P--EFSTANAGLLYDFQLINVEDFQGVGESEPNPYFYQNLGEAEYVVALFMYMCLLGYPA 1221
E AGL I G E E N + N EA V + Y+ LL P+
Sbjct: 758 VDRERFCRWAGLPRQGFPIIFHGVMGKDEREGNSPSFFNPEEAATVTS---YLKLLLAPS 814
Query: 1222 DK----------ISILTTYNGQKHLIRDIINRRCGNNPLIGRPN----KVTTVDRFQGQQ 1267
K + +++ Y Q IR I + + L G + KV +V+ FQGQ+
Sbjct: 815 SKKGKARLSPRSVGVISPYRKQVEKIRYCITKL--DRELRGLDDIKDLKVGSVEEFQGQE 872
Query: 1268 NDYILLSLVRTRA----------VGHLRDVRRLVVAMSRARLGLYI 1303
IL+S VR+ +G L++ +R VA++RA+ L I
Sbjct: 873 RSVILISTVRSSQSFVQLDLDFNLGFLKNPKRFNVAVTRAKALLII 918
Score = 36.6 bits (83), Expect = 0.19
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 806 QIEAIR----AGMQPGLTMVVGPPGTGKTDVAVQIISNIYHNFPEQRTLIVTHSNQALNQ 861
Q++A+R +P ++ GPPGTGKT V+ I + + P+ L SN +
Sbjct: 503 QLQAMRHIVTGTTRPAPYIIFGPPGTGKTVTLVEAIKQVVKHLPKAHILACAPSNSGADL 562
Query: 862 LFEKI 866
L +++
Sbjct: 563 LCQRL 567
>gi|14211540 Mov10, Moloney leukemia virus 10, homolog [Homo sapiens]
Length = 1003
Score = 40.4 bits (93), Expect = 0.013
Identities = 72/286 (25%), Positives = 121/286 (42%), Gaps = 44/286 (15%)
Query: 1056 YDNILMEEAAQILEIETFIPLL-LQNPQDGFSRLKRWIMIGDHHQLPPVIKNMAFQK--- 1111
+ +I ++EA +E E+ + + L ++ + ++ GD QL PV+++ QK
Sbjct: 639 FTHIFIDEAGHCMEPESLVAIAGLMEVKETGDPGGQLVLAGDPRQLGPVLRSPLTQKHGL 698
Query: 1112 -YSNMEQSL-FTRFVRVGVPTVD------LDAQGRARASLCNLYNWRYKNLGNLPHVQLL 1163
YS +E+ L + + G D L R+ ++ ++ N Y G L +
Sbjct: 699 GYSLLERLLTYNSLYKKGPDGYDPQFITKLLRNYRSHPTILDIPNQLYYE-GELQACADV 757
Query: 1164 P--EFSTANAGLLYDFQLINVEDFQGVGESEPNPYFYQNLGEAEYVVALFMYMCLLGYPA 1221
E AGL I G E E N + N EA V + Y+ LL P+
Sbjct: 758 VDRERFCRWAGLPRQGFPIIFHGVMGKDEREGNSPSFFNPEEAATVTS---YLKLLLAPS 814
Query: 1222 DK----------ISILTTYNGQKHLIRDIINRRCGNNPLIGRPN----KVTTVDRFQGQQ 1267
K + +++ Y Q IR I + + L G + KV +V+ FQGQ+
Sbjct: 815 SKKGKARLSPRSVGVISPYRKQVEKIRYCITKL--DRELRGLDDIKDLKVGSVEEFQGQE 872
Query: 1268 NDYILLSLVRTRA----------VGHLRDVRRLVVAMSRARLGLYI 1303
IL+S VR+ +G L++ +R VA++RA+ L I
Sbjct: 873 RSVILISTVRSSQSFVQLDLDFNLGFLKNPKRFNVAVTRAKALLII 918
Score = 36.6 bits (83), Expect = 0.19
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 806 QIEAIR----AGMQPGLTMVVGPPGTGKTDVAVQIISNIYHNFPEQRTLIVTHSNQALNQ 861
Q++A+R +P ++ GPPGTGKT V+ I + + P+ L SN +
Sbjct: 503 QLQAMRHIVTGTTRPAPYIIFGPPGTGKTVTLVEAIKQVVKHLPKAHILACAPSNSGADL 562
Query: 862 LFEKI 866
L +++
Sbjct: 563 LCQRL 567
>gi|149773456 hypothetical protein LOC643314 [Homo sapiens]
Length = 1427
Score = 38.9 bits (89), Expect = 0.037
Identities = 29/101 (28%), Positives = 39/101 (38%), Gaps = 4/101 (3%)
Query: 1387 PPAMVEEGEEVQNQETELETEEEAMTVQADIIPSPTDTSCRQETPAFQTDTTPSETGATS 1446
P A V EE + + T EE + A + P TS P + T+P+ T
Sbjct: 1003 PAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPPPEEPTSPAAAVPTPEEPTSPAAAVPTP 1062
Query: 1447 TPEAIPALSETTP----TVVGAVSAPAEANTPQDATSAPEE 1483
PA + TP + AV P E +P A PEE
Sbjct: 1063 EEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEE 1103
Score = 37.7 bits (86), Expect = 0.083
Identities = 32/103 (31%), Positives = 43/103 (41%), Gaps = 6/103 (5%)
Query: 1387 PPAMVEEGEEVQNQETELETEEEAMTVQADIIPSPTD-TSCRQETPAFQTDTTPSETGAT 1445
P A V EE + + T EE T A +P+P + TS P + T+P+ T
Sbjct: 1055 PAAAVPTPEEPTSPAAAVPTPEEP-TSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPT 1113
Query: 1446 STPEAIPALSETTP----TVVGAVSAPAEANTPQDATSAPEET 1484
A PA + TP + AV P E P A PEE+
Sbjct: 1114 PEEPASPAAAVPTPEEPASPAAAVPTPEEPAFPAPAVPTPEES 1156
Score = 36.6 bits (83), Expect = 0.19
Identities = 31/102 (30%), Positives = 42/102 (41%), Gaps = 6/102 (5%)
Query: 1387 PPAMVEEGEEVQNQETELETEEEAMTVQADIIPSPTD-TSCRQETPAFQTDTTPSETGAT 1445
P A V EE + + T EE T A +P+P + TS P + T+P+ T
Sbjct: 1042 PAAAVPTPEEPTSPAAAVPTPEEP-TSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPT 1100
Query: 1446 STPEAIPALSETTP----TVVGAVSAPAEANTPQDATSAPEE 1483
PA + TP + AV P E +P A PEE
Sbjct: 1101 PEEPTSPAAAVPTPEEPASPAAAVPTPEEPASPAAAVPTPEE 1142
Score = 33.9 bits (76), Expect = 1.2
Identities = 30/103 (29%), Positives = 41/103 (39%), Gaps = 8/103 (7%)
Query: 1387 PPAMVEEGEEVQNQETELETEEEAMTVQADIIPSPTD-TSCRQETPAFQTDTTPSET--- 1442
P V EE + T EE + A +P+P + TS P + T+P+
Sbjct: 977 PATTVHAPEEPDTAAVRVSTPEEPASPAA-AVPTPEEPTSPAAAVPTPEEPTSPAAAVPP 1035
Query: 1443 --GATSTPEAIPALSETTPTVVGAVSAPAEANTPQDATSAPEE 1483
TS A+P E T + AV P E +P A PEE
Sbjct: 1036 PEEPTSPAAAVPTPEEPT-SPAAAVPTPEEPTSPAAAVPTPEE 1077
Score = 32.7 bits (73), Expect = 2.7
Identities = 33/105 (31%), Positives = 44/105 (41%), Gaps = 10/105 (9%)
Query: 1387 PPAMVEEGEEVQNQETELETEEEAMTVQADIIPSPTDTSCRQETPAFQTDTTP-SETGAT 1445
P A V EE + + T EE T A +P+P + + A T P S A
Sbjct: 1081 PAAAVPTPEEPTSPAAAVPTPEEP-TSPAAAVPTPEEPA--SPAAAVPTPEEPASPAAAV 1137
Query: 1446 STPE--AIPALSETTP----TVVGAVSAPAEANTPQDATSAPEET 1484
TPE A PA + TP + AV P E+ +P A P E+
Sbjct: 1138 PTPEEPAFPAPAVPTPEESASAAVAVPTPEESASPAAAVPTPAES 1182
Score = 32.7 bits (73), Expect = 2.7
Identities = 22/74 (29%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
Query: 1410 AMTVQADIIPSPTDTSCRQETPAFQTDTTPSETGATSTPEAIPALSETTPTVVGAVSAPA 1469
AM + SP + E PA + TS A+P L E T + AV P
Sbjct: 1207 AMVATLEEFTSPAASVPTSEEPASLAAAVSNPEEPTSPAAAVPTLEEPTSS-AAAVLTPE 1265
Query: 1470 EANTPQDATSAPEE 1483
E ++P + PEE
Sbjct: 1266 ELSSPAASVPTPEE 1279
>gi|222418647 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 38.1 bits (87), Expect = 0.064
Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 7/78 (8%)
Query: 1404 LETEEEAMTVQADIIPSPTDTSCRQETPAFQTDTTPSETGATSTPEAIPALSETTPTVVG 1463
+ T T+ P+P DT+ TP+ T PS + T A P S TT
Sbjct: 145 VNTSSSVATLAPVNSPAPQDTTAAPPTPSATTPAPPSSSAPPETTAAPPTPSATT----- 199
Query: 1464 AVSAPAEANTPQDATSAP 1481
AP ++ P + T+AP
Sbjct: 200 --QAPPSSSAPPETTAAP 215
Score = 34.7 bits (78), Expect = 0.70
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 7/62 (11%)
Query: 1420 SPTDTSCRQETPAFQTDTTPSETGATSTPEAIPALSETTPTVVGAVSAPAEANTPQDATS 1479
+P +T+ TP+ T PS + T A P TTP AP ++ P + T+
Sbjct: 184 APPETTAAPPTPSATTQAPPSSSAPPETTAAPPTPPATTP-------APPSSSAPPETTA 236
Query: 1480 AP 1481
AP
Sbjct: 237 AP 238
Score = 34.7 bits (78), Expect = 0.70
Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 7/69 (10%)
Query: 1419 PSPTDTSCRQETPAFQTDTTPSETGATSTPEAIPALSETT---PTVVGAVSAPAEANTPQ 1475
P+P +S ET A P+ + T P + A ETT PT AP + PQ
Sbjct: 246 PAPLSSSAPPETTA----VPPTPSATTLDPSSASAPPETTAAPPTPSATTPAPPSSPAPQ 301
Query: 1476 DATSAPEET 1484
+ T+AP T
Sbjct: 302 ETTAAPITT 310
Score = 34.3 bits (77), Expect = 0.92
Identities = 25/82 (30%), Positives = 33/82 (40%), Gaps = 8/82 (9%)
Query: 1401 ETELETEEEAMTVQADIIPS-PTDTSCRQETPAFQTDTTPSETGATSTPEAIPALSETTP 1459
ET + T QA S P +T+ TP T PS + T A P S TTP
Sbjct: 187 ETTAAPPTPSATTQAPPSSSAPPETTAAPPTPPATTPAPPSSSAPPETTAAPPTPSATTP 246
Query: 1460 TVVGAVSAPAEANTPQDATSAP 1481
AP ++ P + T+ P
Sbjct: 247 -------APLSSSAPPETTAVP 261
Score = 31.6 bits (70), Expect = 6.0
Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 9/72 (12%)
Query: 1419 PSPTDTSCRQET---PAFQTDTTPSETGATSTPE--AIPALSETTPTVVGAVSAPAEAN- 1472
P+P +S ET P + TTP+ +++ PE A+P T + SAP E
Sbjct: 223 PAPPSSSAPPETTAAPPTPSATTPAPLSSSAPPETTAVPPTPSATTLDPSSASAPPETTA 282
Query: 1473 ---TPQDATSAP 1481
TP T AP
Sbjct: 283 APPTPSATTPAP 294
Score = 31.2 bits (69), Expect = 7.8
Identities = 25/100 (25%), Positives = 36/100 (36%), Gaps = 14/100 (14%)
Query: 1400 QETELETEEEAMTVQADIIPSPTDTSCRQETPAFQTDTTPSETG---ATSTPEAIPALSE 1456
+ T + A T+ +P +T+ TP+ T PS T+ P P S
Sbjct: 256 ETTAVPPTPSATTLDPSSASAPPETTAAPPTPSATTPAPPSSPAPQETTAAPITTPNSSP 315
Query: 1457 TT-----------PTVVGAVSAPAEANTPQDATSAPEETK 1485
TT PT S + T + TSAP + K
Sbjct: 316 TTLAPDTSETSAAPTHQTTTSVTTQTTTTKQPTSAPGQNK 355
>gi|222418649 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 38.1 bits (87), Expect = 0.064
Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 7/78 (8%)
Query: 1404 LETEEEAMTVQADIIPSPTDTSCRQETPAFQTDTTPSETGATSTPEAIPALSETTPTVVG 1463
+ T T+ P+P DT+ TP+ T PS + T A P S TT
Sbjct: 145 VNTSSSVATLAPVNSPAPQDTTAAPPTPSATTPAPPSSSAPPETTAAPPTPSATT----- 199
Query: 1464 AVSAPAEANTPQDATSAP 1481
AP ++ P + T+AP
Sbjct: 200 --QAPPSSSAPPETTAAP 215
Score = 34.7 bits (78), Expect = 0.70
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 7/62 (11%)
Query: 1420 SPTDTSCRQETPAFQTDTTPSETGATSTPEAIPALSETTPTVVGAVSAPAEANTPQDATS 1479
+P +T+ TP+ T PS + T A P TTP AP ++ P + T+
Sbjct: 184 APPETTAAPPTPSATTQAPPSSSAPPETTAAPPTPPATTP-------APPSSSAPPETTA 236
Query: 1480 AP 1481
AP
Sbjct: 237 AP 238
Score = 34.7 bits (78), Expect = 0.70
Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 7/69 (10%)
Query: 1419 PSPTDTSCRQETPAFQTDTTPSETGATSTPEAIPALSETT---PTVVGAVSAPAEANTPQ 1475
P+P +S ET A P+ + T P + A ETT PT AP + PQ
Sbjct: 246 PAPLSSSAPPETTA----VPPTPSATTLDPSSASAPPETTAAPPTPSATTPAPPSSPAPQ 301
Query: 1476 DATSAPEET 1484
+ T+AP T
Sbjct: 302 ETTAAPITT 310
Score = 34.3 bits (77), Expect = 0.92
Identities = 25/82 (30%), Positives = 33/82 (40%), Gaps = 8/82 (9%)
Query: 1401 ETELETEEEAMTVQADIIPS-PTDTSCRQETPAFQTDTTPSETGATSTPEAIPALSETTP 1459
ET + T QA S P +T+ TP T PS + T A P S TTP
Sbjct: 187 ETTAAPPTPSATTQAPPSSSAPPETTAAPPTPPATTPAPPSSSAPPETTAAPPTPSATTP 246
Query: 1460 TVVGAVSAPAEANTPQDATSAP 1481
AP ++ P + T+ P
Sbjct: 247 -------APLSSSAPPETTAVP 261
Score = 31.6 bits (70), Expect = 6.0
Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 9/72 (12%)
Query: 1419 PSPTDTSCRQET---PAFQTDTTPSETGATSTPE--AIPALSETTPTVVGAVSAPAEAN- 1472
P+P +S ET P + TTP+ +++ PE A+P T + SAP E
Sbjct: 223 PAPPSSSAPPETTAAPPTPSATTPAPLSSSAPPETTAVPPTPSATTLDPSSASAPPETTA 282
Query: 1473 ---TPQDATSAP 1481
TP T AP
Sbjct: 283 APPTPSATTPAP 294
Score = 31.2 bits (69), Expect = 7.8
Identities = 25/100 (25%), Positives = 36/100 (36%), Gaps = 14/100 (14%)
Query: 1400 QETELETEEEAMTVQADIIPSPTDTSCRQETPAFQTDTTPSETG---ATSTPEAIPALSE 1456
+ T + A T+ +P +T+ TP+ T PS T+ P P S
Sbjct: 256 ETTAVPPTPSATTLDPSSASAPPETTAAPPTPSATTPAPPSSPAPQETTAAPITTPNSSP 315
Query: 1457 TT-----------PTVVGAVSAPAEANTPQDATSAPEETK 1485
TT PT S + T + TSAP + K
Sbjct: 316 TTLAPDTSETSAAPTHQTTTSVTTQTTTTKQPTSAPGQNK 355
>gi|222418645 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 38.1 bits (87), Expect = 0.064
Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 7/78 (8%)
Query: 1404 LETEEEAMTVQADIIPSPTDTSCRQETPAFQTDTTPSETGATSTPEAIPALSETTPTVVG 1463
+ T T+ P+P DT+ TP+ T PS + T A P S TT
Sbjct: 145 VNTSSSVATLAPVNSPAPQDTTAAPPTPSATTPAPPSSSAPPETTAAPPTPSATT----- 199
Query: 1464 AVSAPAEANTPQDATSAP 1481
AP ++ P + T+AP
Sbjct: 200 --QAPPSSSAPPETTAAP 215
Score = 34.7 bits (78), Expect = 0.70
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 7/62 (11%)
Query: 1420 SPTDTSCRQETPAFQTDTTPSETGATSTPEAIPALSETTPTVVGAVSAPAEANTPQDATS 1479
+P +T+ TP+ T PS + T A P TTP AP ++ P + T+
Sbjct: 184 APPETTAAPPTPSATTQAPPSSSAPPETTAAPPTPPATTP-------APPSSSAPPETTA 236
Query: 1480 AP 1481
AP
Sbjct: 237 AP 238
Score = 34.7 bits (78), Expect = 0.70
Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 7/69 (10%)
Query: 1419 PSPTDTSCRQETPAFQTDTTPSETGATSTPEAIPALSETT---PTVVGAVSAPAEANTPQ 1475
P+P +S ET A P+ + T P + A ETT PT AP + PQ
Sbjct: 246 PAPLSSSAPPETTA----VPPTPSATTLDPSSASAPPETTAAPPTPSATTPAPPSSPAPQ 301
Query: 1476 DATSAPEET 1484
+ T+AP T
Sbjct: 302 ETTAAPITT 310
Score = 34.3 bits (77), Expect = 0.92
Identities = 25/82 (30%), Positives = 33/82 (40%), Gaps = 8/82 (9%)
Query: 1401 ETELETEEEAMTVQADIIPS-PTDTSCRQETPAFQTDTTPSETGATSTPEAIPALSETTP 1459
ET + T QA S P +T+ TP T PS + T A P S TTP
Sbjct: 187 ETTAAPPTPSATTQAPPSSSAPPETTAAPPTPPATTPAPPSSSAPPETTAAPPTPSATTP 246
Query: 1460 TVVGAVSAPAEANTPQDATSAP 1481
AP ++ P + T+ P
Sbjct: 247 -------APLSSSAPPETTAVP 261
Score = 31.6 bits (70), Expect = 6.0
Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 9/72 (12%)
Query: 1419 PSPTDTSCRQET---PAFQTDTTPSETGATSTPE--AIPALSETTPTVVGAVSAPAEAN- 1472
P+P +S ET P + TTP+ +++ PE A+P T + SAP E
Sbjct: 223 PAPPSSSAPPETTAAPPTPSATTPAPLSSSAPPETTAVPPTPSATTLDPSSASAPPETTA 282
Query: 1473 ---TPQDATSAP 1481
TP T AP
Sbjct: 283 APPTPSATTPAP 294
Score = 31.2 bits (69), Expect = 7.8
Identities = 25/100 (25%), Positives = 36/100 (36%), Gaps = 14/100 (14%)
Query: 1400 QETELETEEEAMTVQADIIPSPTDTSCRQETPAFQTDTTPSETG---ATSTPEAIPALSE 1456
+ T + A T+ +P +T+ TP+ T PS T+ P P S
Sbjct: 256 ETTAVPPTPSATTLDPSSASAPPETTAAPPTPSATTPAPPSSPAPQETTAAPITTPNSSP 315
Query: 1457 TT-----------PTVVGAVSAPAEANTPQDATSAPEETK 1485
TT PT S + T + TSAP + K
Sbjct: 316 TTLAPDTSETSAAPTHQTTTSVTTQTTTTKQPTSAPGQNK 355
>gi|38026934 Rho guanine nucleotide exchange factor (GEF) 11 isoform 2
[Homo sapiens]
Length = 1562
Score = 36.6 bits (83), Expect = 0.19
Identities = 33/138 (23%), Positives = 60/138 (43%), Gaps = 6/138 (4%)
Query: 1334 PTEPFPTTRK-NGERPSHEVQIIKNMPQMANFVYNMYMHLIQTTHHYHQTLLQLPPAMVE 1392
P P P ++ G +P + ++ K+ Q+ NM + + + P +++E
Sbjct: 153 PPPPLPPPQRITGPKPLQDPEVQKHATQILR---NMLRQEEKELQRICEVYSRNPASLLE 209
Query: 1393 EG-EEVQNQETELETEEEAMTV-QADIIPSPTDTSCRQETPAFQTDTTPSETGATSTPEA 1450
E E + + T+L+ + + T DI+P DTS R D+ ++G S E
Sbjct: 210 EQIEGARRRVTQLQLKIQQETGGSVDILPLYGDTSQRPSEGRLSLDSQEGDSGLDSGTER 269
Query: 1451 IPALSETTPTVVGAVSAP 1468
P+LSE+ +S P
Sbjct: 270 FPSLSESLMNRNSVLSDP 287
>gi|4506879 selectin P ligand [Homo sapiens]
Length = 402
Score = 36.6 bits (83), Expect = 0.19
Identities = 36/134 (26%), Positives = 51/134 (38%), Gaps = 5/134 (3%)
Query: 1353 QIIKNMPQMANFVYNMYMHLIQTTHHYHQTLLQLPPAMVEEGEEVQNQETELETEEEAMT 1412
++ + M N + IQTT T Q P E + + TE +T A T
Sbjct: 101 ELTTELANMGNLSTDSAAMEIQTTQPA-ATEAQTTPLAATEAQTTRLTATEAQTTPLAAT 159
Query: 1413 VQADIIPSPTDTSCRQETPAFQTDTTPSETGATSTPEAIPALSETTPTVVGAVSAPAEAN 1472
P+ T+ Q T T P+ A +T PA E T A+ A
Sbjct: 160 EAQTTPPAATEAQTTQPTGLEAQTTAPAAMEAQTT---APAAMEAQTTPPAAMEAQTTQT 216
Query: 1473 TPQDA-TSAPEETK 1485
T +A T+APE T+
Sbjct: 217 TAMEAQTTAPEATE 230
>gi|217272816 RAD51-like 3 isoform 6 [Homo sapiens]
Length = 348
Score = 36.6 bits (83), Expect = 0.19
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 796 KRNTIQFTHTQIEAIRAGMQPG-LTMVVGPPGTGKTDVAVQIISNIYHNFPEQRTLIVTH 854
+R T T + + AG+ G +T +VG PG+GKT V + + +N+ H + + ++
Sbjct: 99 ERGTAVSTSRLDKLLDAGLYTGEVTEIVGGPGSGKTQVCLCMAANVAHGLQQNVLYVDSN 158
Query: 855 SNQALNQLFEKIMALDIDE 873
++L + + A DE
Sbjct: 159 GGLTASRLLQLLQAKTQDE 177
>gi|33946327 nucleoporin 214kDa [Homo sapiens]
Length = 2090
Score = 36.2 bits (82), Expect = 0.24
Identities = 27/78 (34%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
Query: 1408 EEAMTVQADIIPSPTDTSCRQETPAFQTDTTPSETGATSTPEAIPALS-ETTPTVVGAVS 1466
EE + Q P T S ++E Q + S T A+ST ++ ALS E TP G
Sbjct: 1519 EEQQSAQLPQAPPQTSDSVKKEPVLAQPAVSNSGTAASST--SLVALSAEATPATTGVPD 1576
Query: 1467 APAEANTPQDATSAPEET 1484
A EA P + S P +T
Sbjct: 1577 ARTEAVPPASSFSVPGQT 1594
>gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens]
Length = 5765
Score = 36.2 bits (82), Expect = 0.24
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 1412 TVQADIIPSPTDTSCRQETPAFQTDT--TPSETGATSTPEAIPALSETTPTVVGAVSAPA 1469
TV + +P+ ++ TP T T T + TG+T+ P + P + TP + + PA
Sbjct: 4661 TVATGSMATPSSSTQTSGTPPSLTTTATTITATGSTTNPSSTPGTTPITPVLTSTATTPA 4720
Query: 1470 EANTPQDATSAP 1481
++ ++S+P
Sbjct: 4721 ATSSKATSSSSP 4732
Score = 34.3 bits (77), Expect = 0.92
Identities = 47/186 (25%), Positives = 65/186 (34%), Gaps = 38/186 (20%)
Query: 1314 FELTPAFSQLTARPLHLHIIPTEPFPTTRKNGERPSHEVQIIKNMPQMANFVYNMYMHLI 1373
F TP+ S TAR L + I T PTTR + PS I
Sbjct: 2619 FTATPSSSPGTARTLPVWISTTTT-PTTRGSTVTPSS----------------------I 2655
Query: 1374 QTTHHYHQTLLQLPPAMVEEGEEVQNQETELETEEEAMTVQADIIPSPTDTSCRQETPAF 1433
T H L + + T+ ++T A I + T+ TP
Sbjct: 2656 PGTTHTPTVLTTTTTTVATGSMATPSSSTQTSGTPPSLTTTATTITATGSTTNPSSTPGT 2715
Query: 1434 Q--------TDTTPSETGATSTPEA------IPALSETTPTVVGAVSAPAEANTPQDA-T 1478
T TTP+ T +T TP + P + TT T G +P+ +T + A T
Sbjct: 2716 TPIPPVLTTTATTPAATSSTVTPSSALGTTHTPPVPNTTATTHGRSLSPSSPHTVRTAWT 2775
Query: 1479 SAPEET 1484
SA T
Sbjct: 2776 SATSGT 2781
Score = 33.9 bits (76), Expect = 1.2
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Query: 1417 IIPSPTDTSCRQETPAFQTDTTPSETGATSTPEAIPALSETTPTVVGAVS---APAEANT 1473
+ PS + + R T TTP+ +G+T TP ++P + TPTV+ + A T
Sbjct: 3878 VTPSSSPGTARTPPVWISTTTTPTTSGSTVTPSSVPGTTH-TPTVLTTTTTTVATGSMAT 3936
Query: 1474 PQDAT 1478
P +T
Sbjct: 3937 PSSST 3941
Score = 32.7 bits (73), Expect = 2.7
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 1417 IIPSPTDTSCRQETPAFQTDTTPSETGATSTPEAIPALSETTPTVVGAVSAPAEANTPQD 1476
I+ PT T+ T + + TP+ T T+ P + + TTPTV + + P +++P
Sbjct: 1909 ILTKPTTTATT--TASTGSTATPTSTLRTAPPPKVLTTTATTPTVTSSKATP--SSSPGT 1964
Query: 1477 ATSAP 1481
AT+ P
Sbjct: 1965 ATALP 1969
Score = 32.7 bits (73), Expect = 2.7
Identities = 21/82 (25%), Positives = 31/82 (37%), Gaps = 2/82 (2%)
Query: 1402 TELETEEEAMTVQADIIPSPTDTSCRQETPAFQTDTTPSETGATSTPEAIPALSETT--P 1459
T L + PS T + T T TT TG+ +TP + P + TT P
Sbjct: 1996 TRLSQTTTPTATMSTATPSSTPETAHTSTVLTATATTTGATGSVATPSSTPGTAHTTKVP 2055
Query: 1460 TVVGAVSAPAEANTPQDATSAP 1481
T +++P A + P
Sbjct: 2056 TTTTTGFTATPSSSPGTALTPP 2077
Score = 32.7 bits (73), Expect = 2.7
Identities = 24/81 (29%), Positives = 31/81 (38%), Gaps = 8/81 (9%)
Query: 1402 TELETEEEAMTVQADIIPSPTDTSCRQETPAFQTDTTPSETGATSTPEAIPALSETT--P 1459
T L + PS T + T T TT TG+ +TP + P + TT P
Sbjct: 3810 TRLSQTTTPTATMSTATPSSTPETAHTSTVLTTTATTTRATGSVATPSSTPGTAHTTKVP 3869
Query: 1460 T------VVGAVSAPAEANTP 1474
T V S+P A TP
Sbjct: 3870 TTTTTGFTVTPSSSPGTARTP 3890
Score = 32.3 bits (72), Expect = 3.5
Identities = 21/82 (25%), Positives = 31/82 (37%), Gaps = 2/82 (2%)
Query: 1402 TELETEEEAMTVQADIIPSPTDTSCRQETPAFQTDTTPSETGATSTPEAIPALSETT--P 1459
T L + PS T + T T TT TG+ +TP + P + TT P
Sbjct: 3253 TRLSQTTTPTATMSTATPSSTPETVHTSTVLTTTTTTTRATGSVATPSSTPGTAHTTKVP 3312
Query: 1460 TVVGAVSAPAEANTPQDATSAP 1481
T +++P A + P
Sbjct: 3313 TTTTTGFTATPSSSPGTALTPP 3334
Score = 32.3 bits (72), Expect = 3.5
Identities = 21/82 (25%), Positives = 31/82 (37%), Gaps = 2/82 (2%)
Query: 1402 TELETEEEAMTVQADIIPSPTDTSCRQETPAFQTDTTPSETGATSTPEAIPALSETT--P 1459
T L + PS T + T T TT TG+ +TP + P + TT P
Sbjct: 4538 TRLSQTTTPTATMSTATPSSTPETVHTSTVLTATATTTGATGSVATPSSTPGTAHTTKVP 4597
Query: 1460 TVVGAVSAPAEANTPQDATSAP 1481
T +++P A + P
Sbjct: 4598 TTTTTGFTATPSSSPGTALTPP 4619
Score = 31.6 bits (70), Expect = 6.0
Identities = 22/84 (26%), Positives = 33/84 (39%), Gaps = 6/84 (7%)
Query: 1402 TELETEEEAMTVQADIIPSPTDTSCRQETPAFQTDTTPSETGATSTPEAIPALSET---- 1457
T L + PS T + T T TT TG+ +TP + P + T
Sbjct: 2553 TRLSQTTTPTATMSTATPSSTPETVHTSTVLTTTATTTGATGSVATPSSTPGTAHTTKVL 2612
Query: 1458 TPTVVGAVSAPAEANTPQDATSAP 1481
T T G + P +++P A + P
Sbjct: 2613 TTTTTGFTATP--SSSPGTARTLP 2634
Score = 31.6 bits (70), Expect = 6.0
Identities = 24/81 (29%), Positives = 33/81 (40%), Gaps = 7/81 (8%)
Query: 1406 TEEEAMTVQADIIPSPTDTSCRQETPAFQTDTT-----PSETGATSTPEAIPALSETTPT 1460
T + T P T Q T A T TT PS T T+ P + + TTPT
Sbjct: 2977 TPATSSTATPSSTPGTTWILTEQTTAATTTATTGSTAIPSSTPGTAPPPKVLTSTATTPT 3036
Query: 1461 VVGAVSAPAEANTPQDATSAP 1481
S +++P+ AT+ P
Sbjct: 3037 ATS--SKATSSSSPRTATTLP 3055
Score = 31.6 bits (70), Expect = 6.0
Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
Query: 1418 IPSPTDTSCRQETPAFQTDTTPSETGATSTPEAIPALSETTPTVVGAVSAPAEANTPQDA 1477
+ +P+ T T T TT TG T TP + P + T P + + P + +
Sbjct: 3853 VATPSSTPGTAHTTKVPTTTT---TGFTVTPSSSPGTARTPPVWISTTTTPTTSGSTVTP 3909
Query: 1478 TSAPEET 1484
+S P T
Sbjct: 3910 SSVPGTT 3916
Score = 31.6 bits (70), Expect = 6.0
Identities = 16/64 (25%), Positives = 30/64 (46%)
Query: 1418 IPSPTDTSCRQETPAFQTDTTPSETGATSTPEAIPALSETTPTVVGAVSAPAEANTPQDA 1477
+PS T + T T TT + TG+T+TP + P + + + P ++ +
Sbjct: 4242 MPSSTPGTTWILTELTTTATTTASTGSTATPSSTPGTAPPPKVLTSPATTPTATSSKATS 4301
Query: 1478 TSAP 1481
+S+P
Sbjct: 4302 SSSP 4305
Score = 31.6 bits (70), Expect = 6.0
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 6/61 (9%)
Query: 1430 TPAFQTDTTPSETGATSTPEAIPALSE------TTPTVVGAVSAPAEANTPQDATSAPEE 1483
T T TTP+ +G+T TP +IP + TT T V S +++ Q + + P
Sbjct: 4624 TTTTPTTTTPTTSGSTVTPSSIPGTTHTARVLTTTTTTVATGSMATPSSSTQTSGTPPSL 4683
Query: 1484 T 1484
T
Sbjct: 4684 T 4684
Score = 31.2 bits (69), Expect = 7.8
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
Query: 1418 IPSPTDTSCRQETPAFQTDTTPSETGATSTPEAIPALS--ETTPTVVGAVSAPAEANTPQ 1475
+PS T + T T TT TG+T+TP + P + T P+ V+ P +
Sbjct: 2428 MPSSTPGTTWILTELTTTATTTESTGSTATPSSTPGTTWILTEPSTTATVTVPTGSTATA 2487
Query: 1476 DATSAPEET 1484
+T A T
Sbjct: 2488 SSTQATAGT 2496
Score = 31.2 bits (69), Expect = 7.8
Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
Query: 1418 IPSPTDTSCRQETPAFQTDTTPSETGATSTPEAIPALSETTPTVVGAVSAPAEANTPQDA 1477
+ +P+ T T T TT TG T+TP + P + T P + + P +
Sbjct: 2596 VATPSSTPGTAHTTKVLTTTT---TGFTATPSSSPGTARTLPVWISTTTTPTTRGSTVTP 2652
Query: 1478 TSAPEET 1484
+S P T
Sbjct: 2653 SSIPGTT 2659
Score = 31.2 bits (69), Expect = 7.8
Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Query: 1412 TVQADIIPSPTDTSCRQETPA--FQTDTTPSETGATSTPEAIPALSETTPTVVGAVSAPA 1469
TV + +P+ ++ TP T TT + TG+T+ P + P + P + + PA
Sbjct: 3928 TVATGSMATPSSSTQTSGTPPSLITTATTITATGSTTNPSSTPGTTPIPPVLTTTATTPA 3987
Query: 1470 EANTPQDATSA 1480
++ +SA
Sbjct: 3988 ATSSTVTPSSA 3998
Score = 31.2 bits (69), Expect = 7.8
Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Query: 1419 PSPTDTSCRQETPAFQTDTTPSETGATSTPEAIPALS--ETTPTVVGAVSAPAEANTPQD 1476
PS T + T T TT + TG+T+TP + P + T P+ V+ P +
Sbjct: 4414 PSSTPGTTWILTELTTTATTTASTGSTATPSSTPGTTWILTEPSTTATVTVPTGSTATAS 4473
Query: 1477 ATSAPEET 1484
+T A T
Sbjct: 4474 STQATAGT 4481
>gi|217035164 coiled-coil domain containing 27 [Homo sapiens]
Length = 656
Score = 36.2 bits (82), Expect = 0.24
Identities = 28/129 (21%), Positives = 64/129 (49%), Gaps = 12/129 (9%)
Query: 847 QRTLIVTHSNQALNQLFEKIMALDIDERHLLRLGHGEEELETEKDFSRYGRVNYVLA--- 903
+R +++ + ++QL E++ ++D+ HL R +E+L+++K+ + + +A
Sbjct: 521 KRDCVISELDTKVSQLQEQV---ELDQNHLQRWKQLQEDLQSKKEMIQQAEQHTRVALES 577
Query: 904 --RRIELLEEVKRLQKSLGVPGDASYTCETAGYFF---LYQVMSRWEEYISKVKNKGSTL 958
R+E L K +Q + + G S E + L +++S +Y +++K KG +
Sbjct: 578 SQSRLERLRN-KIIQATFSISGTKSLANEISDNDILEALQRIISERSDYYNQLKQKGVKV 636
Query: 959 PDVTEVSTF 967
P + + F
Sbjct: 637 PPLQQSEAF 645
>gi|161019170 mucin 5AC [Homo sapiens]
Length = 6207
Score = 35.8 bits (81), Expect = 0.32
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 8/73 (10%)
Query: 1417 IIPSPTDTSCRQETPAFQTDTTPSETGATSTPEAIP-------ALSETTPTV-VGAVSAP 1468
+ PS + + R T TTP+ +G+T TP ++P L+ TT TV G+++ P
Sbjct: 4403 VTPSSSPGTARTPPVWISTTTTPTTSGSTVTPSSVPGTTHTPTVLTTTTTTVATGSMATP 4462
Query: 1469 AEANTPQDATSAP 1481
+ + T P
Sbjct: 4463 SSSTQTSGTTHTP 4475
Score = 33.9 bits (76), Expect = 1.2
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 8/71 (11%)
Query: 1419 PSPTDTSCRQETPAFQTDTTPSETGATSTPEAIP-------ALSETTPTV-VGAVSAPAE 1470
PS + + R T TTP+ G+T TP +IP L+ TT TV G+++ P+
Sbjct: 3258 PSSSPGTARTLPVWISTTTTPTTRGSTVTPSSIPGTTHTPTVLTTTTTTVATGSMATPSS 3317
Query: 1471 ANTPQDATSAP 1481
+ T P
Sbjct: 3318 STQTSGTTHTP 3328
Score = 33.5 bits (75), Expect = 1.6
Identities = 22/85 (25%), Positives = 32/85 (37%), Gaps = 2/85 (2%)
Query: 1402 TELETEEEAMTVQADIIPSPTDTSCRQETPAFQTDTTPSETGATSTPEAIPALSETT--P 1459
T L + PS T + T T TT TG+ +TP + P + TT P
Sbjct: 5008 TRLSQTTTPTATMSTATPSSTPETVHTSTVLTATATTTGATGSVATPSSTPGTAHTTKVP 5067
Query: 1460 TVVGAVSAPAEANTPQDATSAPEET 1484
T +++P A + P T
Sbjct: 5068 TTTTTGFTATPSSSPGTALTPPTTT 5092
Score = 32.7 bits (73), Expect = 2.7
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 1417 IIPSPTDTSCRQETPAFQTDTTPSETGATSTPEAIPALSETTPTVVGAVSAPAEANTPQD 1476
I+ PT T+ T + + TP+ T T+ P + + TTPTV + + P +++P
Sbjct: 2599 ILTKPTTTATT--TASTGSTATPTSTLRTAPPPKVLTTTATTPTVTSSKATP--SSSPGT 2654
Query: 1477 ATSAP 1481
AT+ P
Sbjct: 2655 ATALP 2659
Score = 32.7 bits (73), Expect = 2.7
Identities = 21/82 (25%), Positives = 31/82 (37%), Gaps = 2/82 (2%)
Query: 1402 TELETEEEAMTVQADIIPSPTDTSCRQETPAFQTDTTPSETGATSTPEAIPALSETT--P 1459
T L + PS T + T T TT TG+ +TP + P + TT P
Sbjct: 2686 TRLSQTTTPTATMSTATPSSTPETAHTSTVLTATATTTGATGSVATPSSTPGTAHTTKVP 2745
Query: 1460 TVVGAVSAPAEANTPQDATSAP 1481
T +++P A + P
Sbjct: 2746 TTTTTGFTATPSSSPGTALTPP 2767
Score = 32.7 bits (73), Expect = 2.7
Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 10/86 (11%)
Query: 1406 TEEEAMTVQADIIPSPTDTSCRQETPA--FQTDTTPSETGATSTPEAIP-------ALSE 1456
T + T +P+ + TP T TTP+ G+T TP +IP L+
Sbjct: 2741 TTKVPTTTTTGFTATPSSSPGTALTPPVWISTTTTPTTRGSTVTPSSIPGTTHTATVLTT 2800
Query: 1457 TTPTV-VGAVSAPAEANTPQDATSAP 1481
TT TV G+++ P+ + T P
Sbjct: 2801 TTTTVATGSMATPSSSTQTSGTTHTP 2826
Score = 32.7 bits (73), Expect = 2.7
Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 10/86 (11%)
Query: 1406 TEEEAMTVQADIIPSPTDTSCRQETPA--FQTDTTPSETGATSTPEAIP-------ALSE 1456
T + T +P+ + TP T TTP+ G+T TP +IP L+
Sbjct: 3888 TTKVPTTTTTGFTATPSSSPGTALTPPVWISTTTTPTTRGSTVTPSSIPGTTHTATVLTT 3947
Query: 1457 TTPTV-VGAVSAPAEANTPQDATSAP 1481
TT TV G+++ P+ + T P
Sbjct: 3948 TTTTVATGSMATPSSSTQTSGTTHTP 3973
Score = 32.7 bits (73), Expect = 2.7
Identities = 24/81 (29%), Positives = 31/81 (38%), Gaps = 8/81 (9%)
Query: 1402 TELETEEEAMTVQADIIPSPTDTSCRQETPAFQTDTTPSETGATSTPEAIPALSETT--P 1459
T L + PS T + T T TT TG+ +TP + P + TT P
Sbjct: 4335 TRLSQTTTPTATMSTATPSSTPETAHTSTVLTTTATTTRATGSVATPSSTPGTAHTTKVP 4394
Query: 1460 T------VVGAVSAPAEANTP 1474
T V S+P A TP
Sbjct: 4395 TTTTTGFTVTPSSSPGTARTP 4415
Score = 32.3 bits (72), Expect = 3.5
Identities = 21/82 (25%), Positives = 31/82 (37%), Gaps = 2/82 (2%)
Query: 1402 TELETEEEAMTVQADIIPSPTDTSCRQETPAFQTDTTPSETGATSTPEAIPALSETT--P 1459
T L + PS T + T T TT TG+ +TP + P + TT P
Sbjct: 3833 TRLSQTTTPTATMSTATPSSTPETVHTSTVLTTTTTTTRATGSVATPSSTPGTAHTTKVP 3892
Query: 1460 TVVGAVSAPAEANTPQDATSAP 1481
T +++P A + P
Sbjct: 3893 TTTTTGFTATPSSSPGTALTPP 3914
Score = 31.6 bits (70), Expect = 6.0
Identities = 22/84 (26%), Positives = 33/84 (39%), Gaps = 6/84 (7%)
Query: 1402 TELETEEEAMTVQADIIPSPTDTSCRQETPAFQTDTTPSETGATSTPEAIPALSET---- 1457
T L + PS T + T T TT TG+ +TP + P + T
Sbjct: 3188 TRLSQTTTPTATMSTATPSSTPETVHTSTVLTTTATTTGATGSVATPSSTPGTAHTTKVL 3247
Query: 1458 TPTVVGAVSAPAEANTPQDATSAP 1481
T T G + P +++P A + P
Sbjct: 3248 TTTTTGFTATP--SSSPGTARTLP 3269
Score = 31.6 bits (70), Expect = 6.0
Identities = 24/81 (29%), Positives = 33/81 (40%), Gaps = 7/81 (8%)
Query: 1406 TEEEAMTVQADIIPSPTDTSCRQETPAFQTDTT-----PSETGATSTPEAIPALSETTPT 1460
T + T P T Q T A T TT PS T T+ P + + TTPT
Sbjct: 3557 TPATSSTATPSSTPGTTWILTEQTTAATTTATTGSTAIPSSTPGTAPPPKVLTSTATTPT 3616
Query: 1461 VVGAVSAPAEANTPQDATSAP 1481
S +++P+ AT+ P
Sbjct: 3617 ATS--SKATSSSSPRTATTLP 3635
Score = 31.6 bits (70), Expect = 6.0
Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
Query: 1418 IPSPTDTSCRQETPAFQTDTTPSETGATSTPEAIPALSETTPTVVGAVSAPAEANTPQDA 1477
+ +P+ T T T TT TG T TP + P + T P + + P + +
Sbjct: 4378 VATPSSTPGTAHTTKVPTTTT---TGFTVTPSSSPGTARTPPVWISTTTTPTTSGSTVTP 4434
Query: 1478 TSAPEET 1484
+S P T
Sbjct: 4435 SSVPGTT 4441
Score = 31.6 bits (70), Expect = 6.0
Identities = 16/64 (25%), Positives = 30/64 (46%)
Query: 1418 IPSPTDTSCRQETPAFQTDTTPSETGATSTPEAIPALSETTPTVVGAVSAPAEANTPQDA 1477
+PS T + T T TT + TG+T+TP + P + + + P ++ +
Sbjct: 4712 MPSSTPGTTWILTELTTTATTTASTGSTATPSSTPGTAPPPKVLTSPATTPTATSSKATS 4771
Query: 1478 TSAP 1481
+S+P
Sbjct: 4772 SSSP 4775
Score = 31.2 bits (69), Expect = 7.8
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
Query: 1418 IPSPTDTSCRQETPAFQTDTTPSETGATSTPEAIPALS--ETTPTVVGAVSAPAEANTPQ 1475
+PS T + T T TT TG+T+TP + P + T P+ V+ P +
Sbjct: 3063 MPSSTPGTTWILTELTTTATTTESTGSTATPSSTPGTTWILTEPSTTATVTVPTGSTATA 3122
Query: 1476 DATSAPEET 1484
+T A T
Sbjct: 3123 SSTQATAGT 3131
Score = 31.2 bits (69), Expect = 7.8
Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
Query: 1418 IPSPTDTSCRQETPAFQTDTTPSETGATSTPEAIPALSETTPTVVGAVSAPAEANTPQDA 1477
+ +P+ T T T TT TG T+TP + P + T P + + P +
Sbjct: 3231 VATPSSTPGTAHTTKVLTTTT---TGFTATPSSSPGTARTLPVWISTTTTPTTRGSTVTP 3287
Query: 1478 TSAPEET 1484
+S P T
Sbjct: 3288 SSIPGTT 3294
Score = 31.2 bits (69), Expect = 7.8
Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Query: 1419 PSPTDTSCRQETPAFQTDTTPSETGATSTPEAIPALS--ETTPTVVGAVSAPAEANTPQD 1476
PS T + T T TT + TG+T+TP + P + T P+ V+ P +
Sbjct: 4884 PSSTPGTTWILTELTTTATTTASTGSTATPSSTPGTTWILTEPSTTATVTVPTGSTATAS 4943
Query: 1477 ATSAPEET 1484
+T A T
Sbjct: 4944 STQATAGT 4951
>gi|189181724 proteoglycan 4 isoform D [Homo sapiens]
Length = 1270
Score = 35.8 bits (81), Expect = 0.32
Identities = 20/66 (30%), Positives = 26/66 (39%), Gaps = 7/66 (10%)
Query: 1419 PSPTDTSCRQETPAFQTDTTPSETGATSTPEAIPALSETTPTVVGAVSAPAEANTPQDAT 1478
P+PT TP TTP E T+ + P ET P VS P P
Sbjct: 684 PAPT-------TPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIH 736
Query: 1479 SAPEET 1484
+P+E+
Sbjct: 737 KSPDES 742
Score = 32.3 bits (72), Expect = 3.5
Identities = 21/70 (30%), Positives = 28/70 (40%), Gaps = 5/70 (7%)
Query: 1419 PSPTDTSCRQETPAFQTDTTPSETGATSTPEAIPAL-SETTPTV----VGAVSAPAEANT 1473
P+PT T TP TTP + T+ E P E TPT PA
Sbjct: 286 PAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTP 345
Query: 1474 PQDATSAPEE 1483
+ A +AP++
Sbjct: 346 KEPAPTAPKK 355
Score = 32.0 bits (71), Expect = 4.6
Identities = 28/100 (28%), Positives = 36/100 (36%), Gaps = 4/100 (4%)
Query: 1388 PAMVEEGEEVQNQETELETEEEAMTVQADIIPSPT-DTSCRQETPAFQTDTTPSETGATS 1446
P +E +E T+E A T + P+PT TP TTP E T+
Sbjct: 319 PTTPKEPTPTTPKEPAPTTKEPAPTTPKE--PAPTAPKKPAPTTPKEPAPTTPKEPAPTT 376
Query: 1447 TPEAIPAL-SETTPTVVGAVSAPAEANTPQDATSAPEETK 1485
T E P E PT + + P SAP K
Sbjct: 377 TKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPK 416
Score = 32.0 bits (71), Expect = 4.6
Identities = 27/102 (26%), Positives = 39/102 (38%), Gaps = 8/102 (7%)
Query: 1388 PAMVEEGEEVQNQETELETEEEAMTVQADIIPSPTDTSCRQETPAFQTDTTPSETGATST 1447
P +E +E T + A T + P+PT T TP + TT E T+
Sbjct: 374 PTTTKEPSPTTPKEPAPTTTKSAPTTTKE--PAPTTTKSAPTTPKEPSPTTTKEPAPTTP 431
Query: 1448 PEAIPAL----SETTPTVVGAVS--APAEANTPQDATSAPEE 1483
E P + TTP + PA T + A + P+E
Sbjct: 432 KEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKE 473
Score = 32.0 bits (71), Expect = 4.6
Identities = 21/68 (30%), Positives = 25/68 (36%), Gaps = 3/68 (4%)
Query: 1421 PTDTSCRQE---TPAFQTDTTPSETGATSTPEAIPALSETTPTVVGAVSAPAEANTPQDA 1477
PT T+C + TP TTP E T+ E P + T AP P
Sbjct: 607 PTSTTCDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPK 666
Query: 1478 TSAPEETK 1485
AP TK
Sbjct: 667 ELAPTTTK 674
Score = 31.6 bits (70), Expect = 6.0
Identities = 27/104 (25%), Positives = 39/104 (37%), Gaps = 13/104 (12%)
Query: 1388 PAMVEEGEEVQNQETELETEEEAMTVQADIIPSPTDTSCRQETPAFQTDTT--------P 1439
P +E +E T + A T + P+PT T TP TT P
Sbjct: 218 PTTPKEPASTTPKEPTPTTIKSAPTTPKE--PAPTTTKSAPTTPKEPAPTTTKEPAPTTP 275
Query: 1440 SETGATSTPEAIPALSETTPTVVGAVSAPAEANTPQDATSAPEE 1483
E T+T E P +++ PT PA + A + P+E
Sbjct: 276 KEPAPTTTKEPAPTTTKSAPT---TPKEPAPTTPKKPAPTTPKE 316
Score = 31.2 bits (69), Expect = 7.8
Identities = 38/152 (25%), Positives = 46/152 (30%), Gaps = 17/152 (11%)
Query: 1334 PTEPFPTTRKNGERPSHEVQIIKNMPQMANFVYNMYMHLIQTTHHYHQTLLQLPPAMVEE 1393
P EP PTT K P+ ++ P+ L TT P E
Sbjct: 471 PKEPAPTTPKE-TAPTTPKKLTPTTPEK----------LAPTTPEK-----PAPTTPEEL 514
Query: 1394 GEEVQNQETELETEEEAMTVQADIIPSPTDTSCRQETPAFQTDTTPSETGATSTPEAIPA 1453
+ T EE A T P+ T TP TTP E T+ E P
Sbjct: 515 APTTPEEPTPTTPEEPAPTTPKAAAPN-TPKEPAPTTPKEPAPTTPKEPAPTTPKETAPT 573
Query: 1454 LSETTPTVVGAVSAPAEANTPQDATSAPEETK 1485
+ T AP P AP TK
Sbjct: 574 TPKGTAPTTLKEPAPTTPKKPAPKELAPTTTK 605
>gi|189181722 proteoglycan 4 isoform C [Homo sapiens]
Length = 1311
Score = 35.8 bits (81), Expect = 0.32
Identities = 20/66 (30%), Positives = 26/66 (39%), Gaps = 7/66 (10%)
Query: 1419 PSPTDTSCRQETPAFQTDTTPSETGATSTPEAIPALSETTPTVVGAVSAPAEANTPQDAT 1478
P+PT TP TTP E T+ + P ET P VS P P
Sbjct: 725 PAPT-------TPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIH 777
Query: 1479 SAPEET 1484
+P+E+
Sbjct: 778 KSPDES 783
Score = 32.3 bits (72), Expect = 3.5
Identities = 21/70 (30%), Positives = 28/70 (40%), Gaps = 5/70 (7%)
Query: 1419 PSPTDTSCRQETPAFQTDTTPSETGATSTPEAIPAL-SETTPTV----VGAVSAPAEANT 1473
P+PT T TP TTP + T+ E P E TPT PA
Sbjct: 327 PAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTP 386
Query: 1474 PQDATSAPEE 1483
+ A +AP++
Sbjct: 387 KEPAPTAPKK 396
Score = 32.0 bits (71), Expect = 4.6
Identities = 28/100 (28%), Positives = 36/100 (36%), Gaps = 4/100 (4%)
Query: 1388 PAMVEEGEEVQNQETELETEEEAMTVQADIIPSPT-DTSCRQETPAFQTDTTPSETGATS 1446
P +E +E T+E A T + P+PT TP TTP E T+
Sbjct: 360 PTTPKEPTPTTPKEPAPTTKEPAPTTPKE--PAPTAPKKPAPTTPKEPAPTTPKEPAPTT 417
Query: 1447 TPEAIPAL-SETTPTVVGAVSAPAEANTPQDATSAPEETK 1485
T E P E PT + + P SAP K
Sbjct: 418 TKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPK 457
Score = 32.0 bits (71), Expect = 4.6
Identities = 27/102 (26%), Positives = 39/102 (38%), Gaps = 8/102 (7%)
Query: 1388 PAMVEEGEEVQNQETELETEEEAMTVQADIIPSPTDTSCRQETPAFQTDTTPSETGATST 1447
P +E +E T + A T + P+PT T TP + TT E T+
Sbjct: 415 PTTTKEPSPTTPKEPAPTTTKSAPTTTKE--PAPTTTKSAPTTPKEPSPTTTKEPAPTTP 472
Query: 1448 PEAIPAL----SETTPTVVGAVS--APAEANTPQDATSAPEE 1483
E P + TTP + PA T + A + P+E
Sbjct: 473 KEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKE 514
Score = 32.0 bits (71), Expect = 4.6
Identities = 21/68 (30%), Positives = 25/68 (36%), Gaps = 3/68 (4%)
Query: 1421 PTDTSCRQE---TPAFQTDTTPSETGATSTPEAIPALSETTPTVVGAVSAPAEANTPQDA 1477
PT T+C + TP TTP E T+ E P + T AP P
Sbjct: 648 PTSTTCDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPK 707
Query: 1478 TSAPEETK 1485
AP TK
Sbjct: 708 ELAPTTTK 715
Score = 31.6 bits (70), Expect = 6.0
Identities = 27/104 (25%), Positives = 39/104 (37%), Gaps = 13/104 (12%)
Query: 1388 PAMVEEGEEVQNQETELETEEEAMTVQADIIPSPTDTSCRQETPAFQTDTT--------P 1439
P +E +E T + A T + P+PT T TP TT P
Sbjct: 259 PTTPKEPASTTPKEPTPTTIKSAPTTPKE--PAPTTTKSAPTTPKEPAPTTTKEPAPTTP 316
Query: 1440 SETGATSTPEAIPALSETTPTVVGAVSAPAEANTPQDATSAPEE 1483
E T+T E P +++ PT PA + A + P+E
Sbjct: 317 KEPAPTTTKEPAPTTTKSAPT---TPKEPAPTTPKKPAPTTPKE 357
Score = 31.2 bits (69), Expect = 7.8
Identities = 38/152 (25%), Positives = 46/152 (30%), Gaps = 17/152 (11%)
Query: 1334 PTEPFPTTRKNGERPSHEVQIIKNMPQMANFVYNMYMHLIQTTHHYHQTLLQLPPAMVEE 1393
P EP PTT K P+ ++ P+ L TT P E
Sbjct: 512 PKEPAPTTPKE-TAPTTPKKLTPTTPEK----------LAPTTPEK-----PAPTTPEEL 555
Query: 1394 GEEVQNQETELETEEEAMTVQADIIPSPTDTSCRQETPAFQTDTTPSETGATSTPEAIPA 1453
+ T EE A T P+ T TP TTP E T+ E P
Sbjct: 556 APTTPEEPTPTTPEEPAPTTPKAAAPN-TPKEPAPTTPKEPAPTTPKEPAPTTPKETAPT 614
Query: 1454 LSETTPTVVGAVSAPAEANTPQDATSAPEETK 1485
+ T AP P AP TK
Sbjct: 615 TPKGTAPTTLKEPAPTTPKKPAPKELAPTTTK 646
>gi|189181720 proteoglycan 4 isoform B [Homo sapiens]
Length = 1363
Score = 35.8 bits (81), Expect = 0.32
Identities = 20/66 (30%), Positives = 26/66 (39%), Gaps = 7/66 (10%)
Query: 1419 PSPTDTSCRQETPAFQTDTTPSETGATSTPEAIPALSETTPTVVGAVSAPAEANTPQDAT 1478
P+PT TP TTP E T+ + P ET P VS P P
Sbjct: 777 PAPT-------TPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIH 829
Query: 1479 SAPEET 1484
+P+E+
Sbjct: 830 KSPDES 835
Score = 32.3 bits (72), Expect = 3.5
Identities = 21/70 (30%), Positives = 28/70 (40%), Gaps = 5/70 (7%)
Query: 1419 PSPTDTSCRQETPAFQTDTTPSETGATSTPEAIPAL-SETTPTV----VGAVSAPAEANT 1473
P+PT T TP TTP + T+ E P E TPT PA
Sbjct: 379 PAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTP 438
Query: 1474 PQDATSAPEE 1483
+ A +AP++
Sbjct: 439 KEPAPTAPKK 448
Score = 32.0 bits (71), Expect = 4.6
Identities = 28/100 (28%), Positives = 36/100 (36%), Gaps = 4/100 (4%)
Query: 1388 PAMVEEGEEVQNQETELETEEEAMTVQADIIPSPT-DTSCRQETPAFQTDTTPSETGATS 1446
P +E +E T+E A T + P+PT TP TTP E T+
Sbjct: 412 PTTPKEPTPTTPKEPAPTTKEPAPTTPKE--PAPTAPKKPAPTTPKEPAPTTPKEPAPTT 469
Query: 1447 TPEAIPAL-SETTPTVVGAVSAPAEANTPQDATSAPEETK 1485
T E P E PT + + P SAP K
Sbjct: 470 TKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPK 509
Score = 32.0 bits (71), Expect = 4.6
Identities = 27/102 (26%), Positives = 39/102 (38%), Gaps = 8/102 (7%)
Query: 1388 PAMVEEGEEVQNQETELETEEEAMTVQADIIPSPTDTSCRQETPAFQTDTTPSETGATST 1447
P +E +E T + A T + P+PT T TP + TT E T+
Sbjct: 467 PTTTKEPSPTTPKEPAPTTTKSAPTTTKE--PAPTTTKSAPTTPKEPSPTTTKEPAPTTP 524
Query: 1448 PEAIPAL----SETTPTVVGAVS--APAEANTPQDATSAPEE 1483
E P + TTP + PA T + A + P+E
Sbjct: 525 KEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKE 566
Score = 32.0 bits (71), Expect = 4.6
Identities = 21/68 (30%), Positives = 25/68 (36%), Gaps = 3/68 (4%)
Query: 1421 PTDTSCRQE---TPAFQTDTTPSETGATSTPEAIPALSETTPTVVGAVSAPAEANTPQDA 1477
PT T+C + TP TTP E T+ E P + T AP P
Sbjct: 700 PTSTTCDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPK 759
Query: 1478 TSAPEETK 1485
AP TK
Sbjct: 760 ELAPTTTK 767
Score = 31.6 bits (70), Expect = 6.0
Identities = 27/104 (25%), Positives = 39/104 (37%), Gaps = 13/104 (12%)
Query: 1388 PAMVEEGEEVQNQETELETEEEAMTVQADIIPSPTDTSCRQETPAFQTDTT--------P 1439
P +E +E T + A T + P+PT T TP TT P
Sbjct: 311 PTTPKEPASTTPKEPTPTTIKSAPTTPKE--PAPTTTKSAPTTPKEPAPTTTKEPAPTTP 368
Query: 1440 SETGATSTPEAIPALSETTPTVVGAVSAPAEANTPQDATSAPEE 1483
E T+T E P +++ PT PA + A + P+E
Sbjct: 369 KEPAPTTTKEPAPTTTKSAPT---TPKEPAPTTPKKPAPTTPKE 409
Score = 31.2 bits (69), Expect = 7.8
Identities = 38/152 (25%), Positives = 46/152 (30%), Gaps = 17/152 (11%)
Query: 1334 PTEPFPTTRKNGERPSHEVQIIKNMPQMANFVYNMYMHLIQTTHHYHQTLLQLPPAMVEE 1393
P EP PTT K P+ ++ P+ L TT P E
Sbjct: 564 PKEPAPTTPKE-TAPTTPKKLTPTTPEK----------LAPTTPEK-----PAPTTPEEL 607
Query: 1394 GEEVQNQETELETEEEAMTVQADIIPSPTDTSCRQETPAFQTDTTPSETGATSTPEAIPA 1453
+ T EE A T P+ T TP TTP E T+ E P
Sbjct: 608 APTTPEEPTPTTPEEPAPTTPKAAAPN-TPKEPAPTTPKEPAPTTPKEPAPTTPKETAPT 666
Query: 1454 LSETTPTVVGAVSAPAEANTPQDATSAPEETK 1485
+ T AP P AP TK
Sbjct: 667 TPKGTAPTTLKEPAPTTPKKPAPKELAPTTTK 698
>gi|67190163 proteoglycan 4 isoform A [Homo sapiens]
Length = 1404
Score = 35.8 bits (81), Expect = 0.32
Identities = 20/66 (30%), Positives = 26/66 (39%), Gaps = 7/66 (10%)
Query: 1419 PSPTDTSCRQETPAFQTDTTPSETGATSTPEAIPALSETTPTVVGAVSAPAEANTPQDAT 1478
P+PT TP TTP E T+ + P ET P VS P P
Sbjct: 818 PAPT-------TPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIH 870
Query: 1479 SAPEET 1484
+P+E+
Sbjct: 871 KSPDES 876
Score = 32.3 bits (72), Expect = 3.5
Identities = 21/70 (30%), Positives = 28/70 (40%), Gaps = 5/70 (7%)
Query: 1419 PSPTDTSCRQETPAFQTDTTPSETGATSTPEAIPAL-SETTPTV----VGAVSAPAEANT 1473
P+PT T TP TTP + T+ E P E TPT PA
Sbjct: 420 PAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTP 479
Query: 1474 PQDATSAPEE 1483
+ A +AP++
Sbjct: 480 KEPAPTAPKK 489
Score = 32.0 bits (71), Expect = 4.6
Identities = 28/100 (28%), Positives = 36/100 (36%), Gaps = 4/100 (4%)
Query: 1388 PAMVEEGEEVQNQETELETEEEAMTVQADIIPSPT-DTSCRQETPAFQTDTTPSETGATS 1446
P +E +E T+E A T + P+PT TP TTP E T+
Sbjct: 453 PTTPKEPTPTTPKEPAPTTKEPAPTTPKE--PAPTAPKKPAPTTPKEPAPTTPKEPAPTT 510
Query: 1447 TPEAIPAL-SETTPTVVGAVSAPAEANTPQDATSAPEETK 1485
T E P E PT + + P SAP K
Sbjct: 511 TKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPK 550
Score = 32.0 bits (71), Expect = 4.6
Identities = 27/102 (26%), Positives = 39/102 (38%), Gaps = 8/102 (7%)
Query: 1388 PAMVEEGEEVQNQETELETEEEAMTVQADIIPSPTDTSCRQETPAFQTDTTPSETGATST 1447
P +E +E T + A T + P+PT T TP + TT E T+
Sbjct: 508 PTTTKEPSPTTPKEPAPTTTKSAPTTTKE--PAPTTTKSAPTTPKEPSPTTTKEPAPTTP 565
Query: 1448 PEAIPAL----SETTPTVVGAVS--APAEANTPQDATSAPEE 1483
E P + TTP + PA T + A + P+E
Sbjct: 566 KEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKE 607
Score = 32.0 bits (71), Expect = 4.6
Identities = 21/68 (30%), Positives = 25/68 (36%), Gaps = 3/68 (4%)
Query: 1421 PTDTSCRQE---TPAFQTDTTPSETGATSTPEAIPALSETTPTVVGAVSAPAEANTPQDA 1477
PT T+C + TP TTP E T+ E P + T AP P
Sbjct: 741 PTSTTCDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPK 800
Query: 1478 TSAPEETK 1485
AP TK
Sbjct: 801 ELAPTTTK 808
Score = 31.6 bits (70), Expect = 6.0
Identities = 27/104 (25%), Positives = 39/104 (37%), Gaps = 13/104 (12%)
Query: 1388 PAMVEEGEEVQNQETELETEEEAMTVQADIIPSPTDTSCRQETPAFQTDTT--------P 1439
P +E +E T + A T + P+PT T TP TT P
Sbjct: 352 PTTPKEPASTTPKEPTPTTIKSAPTTPKE--PAPTTTKSAPTTPKEPAPTTTKEPAPTTP 409
Query: 1440 SETGATSTPEAIPALSETTPTVVGAVSAPAEANTPQDATSAPEE 1483
E T+T E P +++ PT PA + A + P+E
Sbjct: 410 KEPAPTTTKEPAPTTTKSAPT---TPKEPAPTTPKKPAPTTPKE 450
Score = 31.2 bits (69), Expect = 7.8
Identities = 38/152 (25%), Positives = 46/152 (30%), Gaps = 17/152 (11%)
Query: 1334 PTEPFPTTRKNGERPSHEVQIIKNMPQMANFVYNMYMHLIQTTHHYHQTLLQLPPAMVEE 1393
P EP PTT K P+ ++ P+ L TT P E
Sbjct: 605 PKEPAPTTPKE-TAPTTPKKLTPTTPEK----------LAPTTPEK-----PAPTTPEEL 648
Query: 1394 GEEVQNQETELETEEEAMTVQADIIPSPTDTSCRQETPAFQTDTTPSETGATSTPEAIPA 1453
+ T EE A T P+ T TP TTP E T+ E P
Sbjct: 649 APTTPEEPTPTTPEEPAPTTPKAAAPN-TPKEPAPTTPKEPAPTTPKEPAPTTPKETAPT 707
Query: 1454 LSETTPTVVGAVSAPAEANTPQDATSAPEETK 1485
+ T AP P AP TK
Sbjct: 708 TPKGTAPTTLKEPAPTTPKKPAPKELAPTTTK 739
>gi|239749951 PREDICTED: similar to mucin 2 [Homo sapiens]
Length = 2639
Score = 35.4 bits (80), Expect = 0.41
Identities = 25/69 (36%), Positives = 30/69 (43%), Gaps = 9/69 (13%)
Query: 1411 MTVQADIIPSPTDTSCRQETPAFQTDT-----TPSETGATSTPEAIPALSETTPTVVGAV 1465
+T + P+PT TS + TP T T TP+ TG T TP P TT T V
Sbjct: 1316 ITTTTTVTPTPTPTSTQSTTPTPITTTTTVTPTPTPTG-TQTPTTTPI---TTTTTVTPT 1371
Query: 1466 SAPAEANTP 1474
P TP
Sbjct: 1372 PTPTGTQTP 1380
Score = 35.4 bits (80), Expect = 0.41
Identities = 27/84 (32%), Positives = 35/84 (41%), Gaps = 11/84 (13%)
Query: 1411 MTVQADIIPSPTDTSCRQETPAFQTDT-----TPSETGATSTPEAIPALSET----TPTV 1461
+T + P+PT T + TP T T TP+ TG T TP + P + T TPT
Sbjct: 1477 ITTTTTVTPTPTPTGTQTPTPTAITTTTTVTPTPTPTG-TQTPTSTPITTTTTVTPTPTP 1535
Query: 1462 VGA-VSAPAEANTPQDATSAPEET 1484
G P +T T P T
Sbjct: 1536 TGTQTPTPTPISTTTTVTPTPTPT 1559
Score = 34.7 bits (78), Expect = 0.70
Identities = 27/84 (32%), Positives = 33/84 (39%), Gaps = 11/84 (13%)
Query: 1411 MTVQADIIPSPTDTSCRQETPAFQTDT-----TPSETGATSTPEAIPALSET----TPTV 1461
+T + P+PT T + TP T T TP+ TG T TP P + T TPT
Sbjct: 1431 ITTTTTVTPTPTPTGTQAPTPTAITTTSTVTPTPTPTG-TQTPTTTPITTTTTVTPTPTP 1489
Query: 1462 VGA-VSAPAEANTPQDATSAPEET 1484
G P T T P T
Sbjct: 1490 TGTQTPTPTAITTTTTVTPTPTPT 1513
Score = 34.7 bits (78), Expect = 0.70
Identities = 27/79 (34%), Positives = 36/79 (45%), Gaps = 10/79 (12%)
Query: 1410 AMTVQADIIPSPTDTSCRQETPAFQTDTTPSETGATSTPEAIPALSET-TPTVVGAVSAP 1468
A+T + + P+PT T +TP TTP T T TP P ++T TPT + +
Sbjct: 1453 AITTTSTVTPTPTPT--GTQTPT----TTPITTTTTVTPTPTPTGTQTPTPTAITTTTTV 1506
Query: 1469 AEANTP---QDATSAPEET 1484
TP Q TS P T
Sbjct: 1507 TPTPTPTGTQTPTSTPITT 1525
Score = 33.1 bits (74), Expect = 2.0
Identities = 27/69 (39%), Positives = 29/69 (42%), Gaps = 10/69 (14%)
Query: 1419 PSPTDTSCRQETPAFQTDT---TPSETGATSTPEAIPALSETTPTVVGAVSAPAEANTPQ 1475
P+PT T TP T T TP+ TG T TP P TT T V P TP
Sbjct: 1349 PTPTGTQTPTTTPITTTTTVTPTPTPTG-TQTPTTTPI---TTTTTVTPTPTPTGTQTP- 1403
Query: 1476 DATSAPEET 1484
TS P T
Sbjct: 1404 --TSTPITT 1410
Score = 33.1 bits (74), Expect = 2.0
Identities = 26/74 (35%), Positives = 29/74 (39%), Gaps = 9/74 (12%)
Query: 1419 PSPTDTSCRQETPAFQTDT---TPSETGATSTPEAIPALSET----TPTVVGA-VSAPAE 1470
P+PT T TP T T TP+ TG T TP P + T TPT G P
Sbjct: 1395 PTPTGTQTPTSTPITTTTTVTPTPTPTG-TQTPTTTPITTTTTVTPTPTPTGTQAPTPTA 1453
Query: 1471 ANTPQDATSAPEET 1484
T T P T
Sbjct: 1454 ITTTSTVTPTPTPT 1467
Score = 33.1 bits (74), Expect = 2.0
Identities = 29/84 (34%), Positives = 34/84 (40%), Gaps = 13/84 (15%)
Query: 1398 QNQETELETEEEAMTVQADIIPSPTDTSCRQETPAFQTDT---TPSETGATSTPEAIPAL 1454
Q T L T MT P+PT T TP T T TP+ TG T TP IP
Sbjct: 1585 QTPTTVLITTTTTMTPT----PTPTSTKSTTVTPITTTTTVTATPTPTG-TQTPTMIPIS 1639
Query: 1455 SETTPT-----VVGAVSAPAEANT 1473
+ TT T G+ P +T
Sbjct: 1640 TTTTVTPTPTPTTGSTGPPTHTST 1663
Score = 32.3 bits (72), Expect = 3.5
Identities = 23/59 (38%), Positives = 26/59 (44%), Gaps = 7/59 (11%)
Query: 1419 PSPTDTSCRQETPAFQTDT---TPSETGATSTPEAIPALSETTPTVVGAVSAPAEANTP 1474
P+PT T TP T T TP+ TG T TP + P TT T V P TP
Sbjct: 1372 PTPTGTQTPTTTPITTTTTVTPTPTPTG-TQTPTSTPI---TTTTTVTPTPTPTGTQTP 1426
Score = 32.0 bits (71), Expect = 4.6
Identities = 23/69 (33%), Positives = 29/69 (42%), Gaps = 9/69 (13%)
Query: 1411 MTVQADIIPSPTDTSCRQETPAFQTDT-----TPSETGATSTPEAIPALSETTPTVVGAV 1465
+T + P+PT T + TP + T TP+ TG T TP P TT T V
Sbjct: 1523 ITTTTTVTPTPTPTGTQTPTPTPISTTTTVTPTPTPTG-TQTPTTTPI---TTTTTVTPT 1578
Query: 1466 SAPAEANTP 1474
P TP
Sbjct: 1579 PTPTGTQTP 1587
Score = 31.6 bits (70), Expect = 6.0
Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 10/79 (12%)
Query: 1410 AMTVQADIIPSPTDTSCRQETPAFQTDTTPSETGATSTPEAIPALSET-TPTVVGAVSAP 1468
A+T + P+PT T +TP +TP T T TP P ++T TPT + +
Sbjct: 1499 AITTTTTVTPTPTPT--GTQTPT----STPITTTTTVTPTPTPTGTQTPTPTPISTTTTV 1552
Query: 1469 AEANTP---QDATSAPEET 1484
TP Q T+ P T
Sbjct: 1553 TPTPTPTGTQTPTTTPITT 1571
>gi|217416415 RAD51-like 3 isoform 1 [Homo sapiens]
Length = 328
Score = 35.4 bits (80), Expect = 0.41
Identities = 24/103 (23%), Positives = 49/103 (47%), Gaps = 4/103 (3%)
Query: 775 KTLIVEPHVIPNRGPYPYNQPKRNTIQFTH---TQIEAIRAGMQPG-LTMVVGPPGTGKT 830
+ L+ + P G Y + K +T + + + + AG+ G +T +VG PG+GKT
Sbjct: 55 RVLLAQFSAFPVNGADLYEELKTSTAILSTGIGSLDKLLDAGLYTGEVTEIVGGPGSGKT 114
Query: 831 DVAVQIISNIYHNFPEQRTLIVTHSNQALNQLFEKIMALDIDE 873
V + + +N+ H + + ++ ++L + + A DE
Sbjct: 115 QVCLCMAANVAHGLQQNVLYVDSNGGLTASRLLQLLQAKTQDE 157
>gi|27501458 CTF18, chromosome transmission fidelity factor 18
homolog [Homo sapiens]
Length = 975
Score = 35.4 bits (80), Expect = 0.41
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 15/72 (20%)
Query: 777 LIVEPHVIPNRGPYPYNQPKRNTIQFT-------HTQI--EAIRAGMQPG------LTMV 821
L+V H P+R P P +P R + + T H Q+ E + AG+ P + ++
Sbjct: 313 LVVFGHERPSRKPRPSVEPARVSKEATAPGKWKSHEQVLEEMLEAGLDPSQRPKQKVALL 372
Query: 822 VGPPGTGKTDVA 833
GPPG GKT +A
Sbjct: 373 CGPPGLGKTTLA 384
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.137 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,689,985
Number of Sequences: 37866
Number of extensions: 2630453
Number of successful extensions: 9659
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 56
Number of HSP's that attempted gapping in prelim test: 8434
Number of HSP's gapped (non-prelim): 1005
length of query: 1485
length of database: 18,247,518
effective HSP length: 115
effective length of query: 1370
effective length of database: 13,892,928
effective search space: 19033311360
effective search space used: 19033311360
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 69 (31.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.