Guide to the Human Genome
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Name: RAD51L3 Sequence: fasta or formatted (328aa) NCBI GI: 217416415
Description:

RAD51-like 3 isoform 1

Referenced in:

DNases, Recombination, and DNA Repair

Other entries for this name:
alt prot [216aa] RAD51-like 3 isoform 4
alt prot [348aa] RAD51-like 3 isoform 6
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.8         29           2
 C cysteine            1.5          5           1
 D aspartate           4.9         16           1
 E glutamate           5.5         18           3
 F phenylalanine       1.8          6           1
 G glycine            10.1         33           2
 H histidine           1.2          4           1
 I isoleucine          3.4         11           1
 K lysine              3.4         11           1
 L leucine            13.7         45           2
 M methionine          2.7          9           2
 N asparagine          1.5          5           1
 P proline             2.1          7           1
 Q glutamine           7.0         23           2
 R arginine            6.1         20           2
 S serine              7.0         23           2
 T threonine           7.3         24           1
 V valine             10.1         33           4
 W tryptophan          0.6          2           1
 Y tyrosine            1.2          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   RAD51-like 3 isoform 1 
RAD51L3               0.853   RAD51-like 3 isoform 6 
RAD51L3               0.496   RAD51-like 3 isoform 4 
RAD51L1               0.124   RAD51-like 1 isoform 2 
RAD51L1               0.122   RAD51-like 1 isoform 3 
RAD51L1               0.122   RAD51-like 1 isoform 1 
RAD51C                0.079   RAD51 homolog C isoform 1 
RAD51                 0.073   RAD51 homolog protein isoform 1 
XRCC3                 0.058   X-ray repair cross complementing protein 3 
XRCC3                 0.058   X-ray repair cross complementing protein 3 
XRCC3                 0.058   X-ray repair cross complementing protein 3 
DMC1                  0.046   DMC1 dosage suppressor of mck1 homolog 
GRIPAP1               0.018   GRIP1 associated protein 1 isoform 1 
AQR                   0.017   aquarius 
RAD51                 0.015   RAD51 homolog protein isoform 2 
RAD51C                0.013   RAD51 homolog C isoform 2 
XRCC2                 0.013   X-ray repair cross complementing protein 2 
LAMB2                 0.010   laminin, beta 2 precursor 
SNX29                 0.008   sorting nexin 29 
ATRX                  0.007   transcriptional regulator ATRX isoform 2 
ATRX                  0.007   transcriptional regulator ATRX isoform 1 
C12orf51              0.007   chromosome 12 open reading frame 51 
FAM43A                0.007   hypothetical protein LOC131583 
FGD4                  0.007   FYVE, RhoGEF and PH domain containing 4 
AUH                   0.005   AU RNA binding protein/enoyl-Coenzyme A hydratase pre...
TPPP2                 0.005   tubulin polymerization-promoting protein family mem...
TIAM2                 0.005   T-cell lymphoma invasion and metastasis 2 isoform b ...
TIAM2                 0.005   T-cell lymphoma invasion and metastasis 2 isoform a ...
VAT1L                 0.005   vesicle amine transport protein 1 homolog (T. califo...
MDN1                  0.005   MDN1, midasin homolog 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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