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Search of human proteins with 38569477
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|38569477 metaxin 1 isoform 2 [Homo sapiens]
(435 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|38569477 metaxin 1 isoform 2 [Homo sapiens] 897 0.0
gi|38569475 metaxin 1 isoform 1 [Homo sapiens] 880 0.0
gi|148806867 metaxin 3 [Homo sapiens] 221 1e-57
gi|5729937 metaxin 2 [Homo sapiens] 77 4e-14
gi|20149594 heat shock 90kDa protein 1, beta [Homo sapiens] 43 5e-04
gi|209862845 nuclear factor of activated T-cells, cytoplasmic, c... 42 0.001
gi|27886563 nuclear factor of activated T-cells, cytoplasmic, ca... 42 0.001
gi|223890219 RNA binding motif protein, X-linked-like 3 [Homo sa... 40 0.003
gi|154146191 heat shock 90kDa protein 1, alpha isoform 2 [Homo s... 40 0.004
gi|153792590 heat shock 90kDa protein 1, alpha isoform 1 [Homo s... 40 0.004
gi|169164483 PREDICTED: hypothetical protein [Homo sapiens] 40 0.005
gi|113414226 PREDICTED: hypothetical protein [Homo sapiens] 40 0.005
gi|113413437 PREDICTED: hypothetical protein [Homo sapiens] 40 0.005
gi|21536413 bridging integrator 1 isoform 7 [Homo sapiens] 40 0.005
gi|21536404 bridging integrator 1 isoform 3 [Homo sapiens] 40 0.005
gi|24308336 hypothetical protein LOC84553 [Homo sapiens] 39 0.009
gi|239754987 PREDICTED: hypothetical protein [Homo sapiens] 39 0.012
gi|122937267 lemur tyrosine kinase 3 [Homo sapiens] 39 0.012
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 39 0.012
gi|51702222 SPT2, Suppressor of Ty, domain containing 1 [Homo sa... 39 0.012
gi|239755142 PREDICTED: hypothetical protein [Homo sapiens] 38 0.016
gi|239749631 PREDICTED: hypothetical protein [Homo sapiens] 38 0.016
gi|239743906 PREDICTED: hypothetical protein XP_002342988 [Homo ... 38 0.016
gi|38787970 tensin like C1 domain containing phosphatase isoform... 38 0.016
gi|38787957 tensin like C1 domain containing phosphatase isoform... 38 0.016
gi|38787941 tensin like C1 domain containing phosphatase isoform... 38 0.016
gi|188536004 zinc finger protein 469 [Homo sapiens] 38 0.021
gi|224465238 hypothetical protein LOC283999 [Homo sapiens] 37 0.027
gi|113416996 PREDICTED: ankyrin repeat domain 33B [Homo sapiens] 37 0.027
gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens] 37 0.027
>gi|38569477 metaxin 1 isoform 2 [Homo sapiens]
Length = 435
Score = 897 bits (2317), Expect = 0.0
Identities = 435/435 (100%), Positives = 435/435 (100%)
Query: 1 MLLGGPPRSPRSGTSPKGPWSSTGHVQFGKSPQTWPRRTRPRSPEPAAPSGVRGSTWTRR 60
MLLGGPPRSPRSGTSPKGPWSSTGHVQFGKSPQTWPRRTRPRSPEPAAPSGVRGSTWTRR
Sbjct: 1 MLLGGPPRSPRSGTSPKGPWSSTGHVQFGKSPQTWPRRTRPRSPEPAAPSGVRGSTWTRR 60
Query: 61 RDTPRRAGPTALSRYVGHLWMGRRPPSPEARGPVPRSSAASRARRSLASPGISPGPLTAT 120
RDTPRRAGPTALSRYVGHLWMGRRPPSPEARGPVPRSSAASRARRSLASPGISPGPLTAT
Sbjct: 61 RDTPRRAGPTALSRYVGHLWMGRRPPSPEARGPVPRSSAASRARRSLASPGISPGPLTAT 120
Query: 121 IGGAVAGGGPRQGRAEAHKEVFPGQRVGKMAAPMELFCWSGGWGLPSVDLDSLAVLTYAR 180
IGGAVAGGGPRQGRAEAHKEVFPGQRVGKMAAPMELFCWSGGWGLPSVDLDSLAVLTYAR
Sbjct: 121 IGGAVAGGGPRQGRAEAHKEVFPGQRVGKMAAPMELFCWSGGWGLPSVDLDSLAVLTYAR 180
Query: 181 FTGAPLKVHKISNPWQSPSGTLPALRTSHGEVISVPHKIITHLRKEVHTFWIDTKNYVEV 240
FTGAPLKVHKISNPWQSPSGTLPALRTSHGEVISVPHKIITHLRKEVHTFWIDTKNYVEV
Sbjct: 181 FTGAPLKVHKISNPWQSPSGTLPALRTSHGEVISVPHKIITHLRKEVHTFWIDTKNYVEV 240
Query: 241 TRKWYAEAMPFPLNFFLPGRMQRQYMERLQLLTGEHRPEDEEELEKELYREARECLTLLS 300
TRKWYAEAMPFPLNFFLPGRMQRQYMERLQLLTGEHRPEDEEELEKELYREARECLTLLS
Sbjct: 241 TRKWYAEAMPFPLNFFLPGRMQRQYMERLQLLTGEHRPEDEEELEKELYREARECLTLLS 300
Query: 301 QRLGSQKFFFGDAPASLDAFVFSYLALLLQAKLPSGKLQVHLRGLHNLCAYCTHILSLYF 360
QRLGSQKFFFGDAPASLDAFVFSYLALLLQAKLPSGKLQVHLRGLHNLCAYCTHILSLYF
Sbjct: 301 QRLGSQKFFFGDAPASLDAFVFSYLALLLQAKLPSGKLQVHLRGLHNLCAYCTHILSLYF 360
Query: 361 PWDGAEVPPQRQTPAGPETEEEPYRRRNQILSVLAGLAAMVGYALLSGIVSIQRATPARA 420
PWDGAEVPPQRQTPAGPETEEEPYRRRNQILSVLAGLAAMVGYALLSGIVSIQRATPARA
Sbjct: 361 PWDGAEVPPQRQTPAGPETEEEPYRRRNQILSVLAGLAAMVGYALLSGIVSIQRATPARA 420
Query: 421 PGTRTLGMAEEDEEE 435
PGTRTLGMAEEDEEE
Sbjct: 421 PGTRTLGMAEEDEEE 435
>gi|38569475 metaxin 1 isoform 1 [Homo sapiens]
Length = 466
Score = 880 bits (2275), Expect = 0.0
Identities = 435/466 (93%), Positives = 435/466 (93%), Gaps = 31/466 (6%)
Query: 1 MLLGGPPRSPRSGTSPKGPWSSTGHVQFGKSPQTWPRRTRPRSPEPAAPSGVRGSTWTRR 60
MLLGGPPRSPRSGTSPKGPWSSTGHVQFGKSPQTWPRRTRPRSPEPAAPSGVRGSTWTRR
Sbjct: 1 MLLGGPPRSPRSGTSPKGPWSSTGHVQFGKSPQTWPRRTRPRSPEPAAPSGVRGSTWTRR 60
Query: 61 RDTPRRAGPTALSRYVGHLWMGRRPPSPEARGPVPRSSAASRARRSLASPGISPGPLTAT 120
RDTPRRAGPTALSRYVGHLWMGRRPPSPEARGPVPRSSAASRARRSLASPGISPGPLTAT
Sbjct: 61 RDTPRRAGPTALSRYVGHLWMGRRPPSPEARGPVPRSSAASRARRSLASPGISPGPLTAT 120
Query: 121 IGGAVAGGGPRQGRAEAHKEVFPGQRVGKMAAPMELFCWSGGWGLPSVDLDSLAVLTYAR 180
IGGAVAGGGPRQGRAEAHKEVFPGQRVGKMAAPMELFCWSGGWGLPSVDLDSLAVLTYAR
Sbjct: 121 IGGAVAGGGPRQGRAEAHKEVFPGQRVGKMAAPMELFCWSGGWGLPSVDLDSLAVLTYAR 180
Query: 181 FTGAPLKVHKISNPWQSPSGTLPALRTSHGEVISVPHKIITHLRKE-------------- 226
FTGAPLKVHKISNPWQSPSGTLPALRTSHGEVISVPHKIITHLRKE
Sbjct: 181 FTGAPLKVHKISNPWQSPSGTLPALRTSHGEVISVPHKIITHLRKEKYNADYDLSARQGA 240
Query: 227 -----------------VHTFWIDTKNYVEVTRKWYAEAMPFPLNFFLPGRMQRQYMERL 269
VHTFWIDTKNYVEVTRKWYAEAMPFPLNFFLPGRMQRQYMERL
Sbjct: 241 DTLAFMSLLEEKLLPVLVHTFWIDTKNYVEVTRKWYAEAMPFPLNFFLPGRMQRQYMERL 300
Query: 270 QLLTGEHRPEDEEELEKELYREARECLTLLSQRLGSQKFFFGDAPASLDAFVFSYLALLL 329
QLLTGEHRPEDEEELEKELYREARECLTLLSQRLGSQKFFFGDAPASLDAFVFSYLALLL
Sbjct: 301 QLLTGEHRPEDEEELEKELYREARECLTLLSQRLGSQKFFFGDAPASLDAFVFSYLALLL 360
Query: 330 QAKLPSGKLQVHLRGLHNLCAYCTHILSLYFPWDGAEVPPQRQTPAGPETEEEPYRRRNQ 389
QAKLPSGKLQVHLRGLHNLCAYCTHILSLYFPWDGAEVPPQRQTPAGPETEEEPYRRRNQ
Sbjct: 361 QAKLPSGKLQVHLRGLHNLCAYCTHILSLYFPWDGAEVPPQRQTPAGPETEEEPYRRRNQ 420
Query: 390 ILSVLAGLAAMVGYALLSGIVSIQRATPARAPGTRTLGMAEEDEEE 435
ILSVLAGLAAMVGYALLSGIVSIQRATPARAPGTRTLGMAEEDEEE
Sbjct: 421 ILSVLAGLAAMVGYALLSGIVSIQRATPARAPGTRTLGMAEEDEEE 466
>gi|148806867 metaxin 3 [Homo sapiens]
Length = 312
Score = 221 bits (562), Expect = 1e-57
Identities = 113/274 (41%), Positives = 163/274 (59%), Gaps = 37/274 (13%)
Query: 150 MAAPMELFCWSGGWGLPSVDLDSLAVLTYARFTGAPLKVHKISNPWQSPSGTLPALRTSH 209
MAAP+EL CW GGWGLPSV +SL V+ YA+F+GAPLKV+ I N W+ G +P L T+
Sbjct: 1 MAAPLELSCWGGGWGLPSVHSESLVVMAYAKFSGAPLKVNVIDNTWRGSRGDVPIL-TTE 59
Query: 210 GEVISVPHKIITHLRKE-------------------------------VHTFWIDTKNYV 238
+++S P KI+ LRK+ +HTFW+++ NY
Sbjct: 60 DDMVSQPAKILNFLRKQKYNADYELSAKQGADTLAYIALLEEKLLPAVLHTFWVESDNYF 119
Query: 239 EVTRKWYAEAMPFPLNFFLPGRMQRQYMERLQLLTGEHRPEDEEELEKELYREARECLTL 298
VT+ W+A +PFPL+ LPGRM + + R+ L G+ E+E ++YR+A+ECL L
Sbjct: 120 TVTKPWFASQIPFPLSLILPGRMSKGALNRILLTRGQPPLYHLREVEAQIYRDAKECLNL 179
Query: 299 LSQRLGSQKFFFGDAPASLDAFVFSYLALLLQAKLPSGKLQVHLRGLHNLCAYCTHILSL 358
LS RLG+ +FFFGD P++LDA+VF +LA L + + P +LQ HL+ L NLC +C ILS
Sbjct: 180 LSNRLGTSQFFFGDTPSTLDAYVFGFLAPLYKVRFPKVQLQEHLKQLSNLCRFCDDILSS 239
Query: 359 YFPWDGAEVPPQRQTPAGPETEEEPYRRRNQILS 392
YF + +PAG ET + ++ Q+++
Sbjct: 240 YFRLSLGGI-----SPAGQETVDANLQKLTQLVN 268
>gi|5729937 metaxin 2 [Homo sapiens]
Length = 263
Score = 76.6 bits (187), Expect = 4e-14
Identities = 56/221 (25%), Positives = 94/221 (42%), Gaps = 39/221 (17%)
Query: 172 SLAVLTYARFTGAPLKVHKISNP-WQSPSGTLPALRTSHGEVISVPHKIITHLRKEVHTF 230
SLAV + + P+KV +N + SPSG +P + + +V+S I+ ++ + H+
Sbjct: 41 SLAVQAFLQMCNLPIKVVCRANAEYMSPSGKVPFIHVGN-QVVSELGPIVQFVKAKGHSL 99
Query: 231 -------------------------------WIDTKNYVEVTRKWYAEAMPFPLNFFLPG 259
W D E+T Y P+PLN L
Sbjct: 100 SDGLEEVQKAEMKAYMELVNNMLLTAELYLQWCDEATVGEITHARYGSPYPWPLNHILAY 159
Query: 260 RMQRQYMERLQLLTGEHRPEDEEELEKELYREARECLTLLSQRLGSQKFFFGDAPASLDA 319
+ Q + +++ + + D+ + + +C LSQRLG+Q +FF P LDA
Sbjct: 160 QKQWEVKRKMKAIGWGKKTLDQ------VLEDVDQCCQALSQRLGTQPYFFNKQPTELDA 213
Query: 320 FVFSYLALLLQAKLPSGKLQVHLRGLHNLCAYCTHILSLYF 360
VF +L +L +L + +L ++ NL A+C I YF
Sbjct: 214 LVFGHLYTILTTQLTNDELSEKVKNYSNLLAFCRRIEQHYF 254
>gi|20149594 heat shock 90kDa protein 1, beta [Homo sapiens]
Length = 724
Score = 43.1 bits (100), Expect = 5e-04
Identities = 26/93 (27%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 195 WQSPSGTLPALRTSHGEVISVPHKIITHLRKEVHTFWIDTKNYVEVTRKWYAEAMPFPLN 254
W+S +G +R HGE I K+I HL KE T +++ + EV +K +++ + +P+
Sbjct: 157 WESSAGGSFTVRADHGEPIGRGTKVILHL-KEDQTEYLEERRVKEVVKK-HSQFIGYPIT 214
Query: 255 FFLPGRMQRQYM-ERLQLLTGEHRPEDEEELEK 286
+L +++ + + GE ED+++ EK
Sbjct: 215 LYLEKEREKEISDDEAEEEKGEKEEEDKDDEEK 247
>gi|209862845 nuclear factor of activated T-cells, cytoplasmic,
calcineurin-dependent 4 isoform 1 [Homo sapiens]
Length = 964
Score = 42.0 bits (97), Expect = 0.001
Identities = 48/147 (32%), Positives = 63/147 (42%), Gaps = 29/147 (19%)
Query: 3 LGGPPRSPRSGT---SPKGPWSSTGHVQFGKSPQ-TW-----PRRTRPRSPEPAAPSGVR 53
LG P SPR+ +P+ PWS G G+ P+ +W P T P SP PA+P G R
Sbjct: 274 LGSPLPSPRASPRPWTPEDPWSLYGPSPGGRGPEDSWLLLSAPGPT-PASPRPASPCGKR 332
Query: 54 GSTWTRRRDTPRRAGPTALSRYVGHLWMGRRPPSPEARGPVPRSSAASRARRSLASPGIS 113
+ TP A P ALSR G PP P P+P LA S
Sbjct: 333 RYS---SSGTPSSASP-ALSRRGSLGEEGSEPPPPP---PLP-----------LARDPGS 374
Query: 114 PGPLTATIGGAVAGGGPRQGRAEAHKE 140
PGP +G A P++ R + ++
Sbjct: 375 PGPFD-YVGAPPAESIPQKTRRTSSEQ 400
>gi|27886563 nuclear factor of activated T-cells, cytoplasmic,
calcineurin-dependent 4 isoform 2 [Homo sapiens]
Length = 902
Score = 42.0 bits (97), Expect = 0.001
Identities = 48/147 (32%), Positives = 63/147 (42%), Gaps = 29/147 (19%)
Query: 3 LGGPPRSPRSGT---SPKGPWSSTGHVQFGKSPQ-TW-----PRRTRPRSPEPAAPSGVR 53
LG P SPR+ +P+ PWS G G+ P+ +W P T P SP PA+P G R
Sbjct: 211 LGSPLPSPRASPRPWTPEDPWSLYGPSPGGRGPEDSWLLLSAPGPT-PASPRPASPCGKR 269
Query: 54 GSTWTRRRDTPRRAGPTALSRYVGHLWMGRRPPSPEARGPVPRSSAASRARRSLASPGIS 113
+ TP A P ALSR G PP P P+P LA S
Sbjct: 270 RYS---SSGTPSSASP-ALSRRGSLGEEGSEPPPPP---PLP-----------LARDPGS 311
Query: 114 PGPLTATIGGAVAGGGPRQGRAEAHKE 140
PGP +G A P++ R + ++
Sbjct: 312 PGPFD-YVGAPPAESIPQKTRRTSSEQ 337
>gi|223890219 RNA binding motif protein, X-linked-like 3 [Homo
sapiens]
Length = 1067
Score = 40.4 bits (93), Expect = 0.003
Identities = 47/173 (27%), Positives = 70/173 (40%), Gaps = 22/173 (12%)
Query: 44 PEPAAPSGVRGSTWTRRRDT-----PRRAGPTALSRYVGH--LWMGRRPPSPEARGPVPR 96
P P + S R S TR + P + P Y G+ LW R P P RGP PR
Sbjct: 97 PTPGSGSRSRFSHRTRGGGSSPQRPPSQGRPDDGRGYAGYFDLWP-YRAPMPRKRGPPPR 155
Query: 97 SSAASRARRSLASPGISPGPLTATIGGAVAGGGPRQGRAEAHKEVFPGQRVG---KMAAP 153
A+ +R+ +P L ++G + G P + + + P + G K A P
Sbjct: 156 HWASPPHKRA------TPSSLAHSVGCGMRGKAPTVSGQDGYSGLQPRRWAGPPHKRAVP 209
Query: 154 MELFCWSGGWGLPSVDLDSLAVLTYARFTGAPLKVHKISNPWQSPSGTLPALR 206
GG G+P + AV ++G +V + P + P +PALR
Sbjct: 210 RSSLARIGGSGMPG---KAPAVWGQDGYSGP--RVREPLPPCRDPGDFVPALR 257
>gi|154146191 heat shock 90kDa protein 1, alpha isoform 2 [Homo
sapiens]
Length = 732
Score = 40.0 bits (92), Expect = 0.004
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 195 WQSPSGTLPALRTSHGEVISVPHKIITHLRKEVHTFWIDTKNYVEVTRKWYAEAMPFPLN 254
W+S +G +RT GE + K+I HL KE T +++ + E+ +K +++ + +P+
Sbjct: 162 WESSAGGSFTVRTDTGEPMGRGTKVILHL-KEDQTEYLEERRIKEIVKK-HSQFIGYPIT 219
Query: 255 FFLPGRMQRQYMERLQLLTGEHRPEDEEELEKE 287
F+ ++ + E + + EEE EKE
Sbjct: 220 LFVEKERDKEVSDD----EAEEKEDKEEEKEKE 248
>gi|153792590 heat shock 90kDa protein 1, alpha isoform 1 [Homo
sapiens]
Length = 854
Score = 40.0 bits (92), Expect = 0.004
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 195 WQSPSGTLPALRTSHGEVISVPHKIITHLRKEVHTFWIDTKNYVEVTRKWYAEAMPFPLN 254
W+S +G +RT GE + K+I HL KE T +++ + E+ +K +++ + +P+
Sbjct: 284 WESSAGGSFTVRTDTGEPMGRGTKVILHL-KEDQTEYLEERRIKEIVKK-HSQFIGYPIT 341
Query: 255 FFLPGRMQRQYMERLQLLTGEHRPEDEEELEKE 287
F+ ++ + E + + EEE EKE
Sbjct: 342 LFVEKERDKEVSDD----EAEEKEDKEEEKEKE 370
>gi|169164483 PREDICTED: hypothetical protein [Homo sapiens]
Length = 324
Score = 39.7 bits (91), Expect = 0.005
Identities = 47/147 (31%), Positives = 58/147 (39%), Gaps = 27/147 (18%)
Query: 4 GGPPRSPRSGTSPKGPWSSTGHVQFGKSPQTWPRRTRPRSPEPAA---------PSGVR- 53
GGP PR S GP + Q + P PR TR + P P+G R
Sbjct: 144 GGPGLPPRGKAS--GP--ARDSAQQRRRPTRRPRGTRGGARRPGVRGQGAAAVGPTGPRP 199
Query: 54 -GSTWTRRRDTPRRAGPTALSRYVGHLWMGRRPPSPEARGPVPRSSAASRARRSLASPGI 112
G+ +RR P P S + G W RPPSP A P A R AS
Sbjct: 200 TGAPPSRRTPPPGPRRPLR-SPHSGSGWTPARPPSPPAGAP--------EALRPPASTTR 250
Query: 113 SPGPLTATI---GGAVAGGGPRQGRAE 136
+P PLT + G A AG P ++E
Sbjct: 251 APAPLTLSFSARGLAWAGESPASHQSE 277
>gi|113414226 PREDICTED: hypothetical protein [Homo sapiens]
Length = 324
Score = 39.7 bits (91), Expect = 0.005
Identities = 47/147 (31%), Positives = 58/147 (39%), Gaps = 27/147 (18%)
Query: 4 GGPPRSPRSGTSPKGPWSSTGHVQFGKSPQTWPRRTRPRSPEPAA---------PSGVR- 53
GGP PR S GP + Q + P PR TR + P P+G R
Sbjct: 144 GGPGLPPRGKAS--GP--ARDSAQQRRRPTRRPRGTRGGARRPGVRGQGAAAVGPTGPRP 199
Query: 54 -GSTWTRRRDTPRRAGPTALSRYVGHLWMGRRPPSPEARGPVPRSSAASRARRSLASPGI 112
G+ +RR P P S + G W RPPSP A P A R AS
Sbjct: 200 TGAPPSRRTPPPGPRRPLR-SPHSGSGWTPARPPSPPAGAP--------EALRPPASTTR 250
Query: 113 SPGPLTATI---GGAVAGGGPRQGRAE 136
+P PLT + G A AG P ++E
Sbjct: 251 APAPLTLSFSARGLAWAGESPASHQSE 277
>gi|113413437 PREDICTED: hypothetical protein [Homo sapiens]
Length = 324
Score = 39.7 bits (91), Expect = 0.005
Identities = 47/147 (31%), Positives = 58/147 (39%), Gaps = 27/147 (18%)
Query: 4 GGPPRSPRSGTSPKGPWSSTGHVQFGKSPQTWPRRTRPRSPEPAA---------PSGVR- 53
GGP PR S GP + Q + P PR TR + P P+G R
Sbjct: 144 GGPGLPPRGKAS--GP--ARDSAQQRRRPTRRPRGTRGGARRPGVRGQGAAAVGPTGPRP 199
Query: 54 -GSTWTRRRDTPRRAGPTALSRYVGHLWMGRRPPSPEARGPVPRSSAASRARRSLASPGI 112
G+ +RR P P S + G W RPPSP A P A R AS
Sbjct: 200 TGAPPSRRTPPPGPRRPLR-SPHSGSGWTPARPPSPPAGAP--------EALRPPASTTR 250
Query: 113 SPGPLTATI---GGAVAGGGPRQGRAE 136
+P PLT + G A AG P ++E
Sbjct: 251 APAPLTLSFSARGLAWAGESPASHQSE 277
>gi|21536413 bridging integrator 1 isoform 7 [Homo sapiens]
Length = 475
Score = 39.7 bits (91), Expect = 0.005
Identities = 36/141 (25%), Positives = 52/141 (36%), Gaps = 26/141 (18%)
Query: 6 PPRSPRSGTSPKGPWSSTGHVQFGKSPQ----TWPRRTRPRSP--------------EPA 47
P + +S + P G ++T ++ P+ P T P+SP EP+
Sbjct: 259 PAKGNKSPSPPDGSPAATPEIRVNHEPEPAGGATPGATLPKSPSQPTESPAGSLPSGEPS 318
Query: 48 APSGVRGSTWTRRRDTPRRAGPTALSRYVGHLWMGRRPPSPEARGPVPRSSAASRARRSL 107
A G +W + P A P S G P A P +AAS A S
Sbjct: 319 AAEGTFAVSWPSQTAEPGPAQPAEASEVAG-------GTQPAAGAQEPGETAASEAASS- 370
Query: 108 ASPGISPGPLTATIGGAVAGG 128
+ P + AT+ G V GG
Sbjct: 371 SLPAVVVETFPATVNGTVEGG 391
>gi|21536404 bridging integrator 1 isoform 3 [Homo sapiens]
Length = 506
Score = 39.7 bits (91), Expect = 0.005
Identities = 36/141 (25%), Positives = 52/141 (36%), Gaps = 26/141 (18%)
Query: 6 PPRSPRSGTSPKGPWSSTGHVQFGKSPQ----TWPRRTRPRSP--------------EPA 47
P + +S + P G ++T ++ P+ P T P+SP EP+
Sbjct: 290 PAKGNKSPSPPDGSPAATPEIRVNHEPEPAGGATPGATLPKSPSQPTESPAGSLPSGEPS 349
Query: 48 APSGVRGSTWTRRRDTPRRAGPTALSRYVGHLWMGRRPPSPEARGPVPRSSAASRARRSL 107
A G +W + P A P S G P A P +AAS A S
Sbjct: 350 AAEGTFAVSWPSQTAEPGPAQPAEASEVAG-------GTQPAAGAQEPGETAASEAASS- 401
Query: 108 ASPGISPGPLTATIGGAVAGG 128
+ P + AT+ G V GG
Sbjct: 402 SLPAVVVETFPATVNGTVEGG 422
>gi|24308336 hypothetical protein LOC84553 [Homo sapiens]
Length = 409
Score = 38.9 bits (89), Expect = 0.009
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 285 EKELYREARECLTLLSQRLGSQKFFFGDAPASLDAFVFSYLALLLQAKLPSGKLQVHLRG 344
E+E+Y + + L+ LG +K+ G ++LDA VF +LA + LP + + ++G
Sbjct: 256 EEEIYMLMEKDMRSLAGLLGDKKYIMGPKLSTLDATVFGHLAQAMWT-LPGTRPERLIKG 314
Query: 345 -LHNLCAYCTHILSLYFP 361
L NL YC I ++P
Sbjct: 315 ELINLAMYCERIRRKFWP 332
>gi|239754987 PREDICTED: hypothetical protein [Homo sapiens]
Length = 412
Score = 38.5 bits (88), Expect = 0.012
Identities = 44/147 (29%), Positives = 56/147 (38%), Gaps = 33/147 (22%)
Query: 45 EPAAPS-GVRGSTWTRRRDTPRRAGPTALSRYVGHLWMGRRP----PSPEAR---GPVPR 96
EPA P+ G R S TR R T RA + RRP P P R G + R
Sbjct: 93 EPARPAEGARPSPGTRARKTRPRARTAST----------RRPCALCPEPALRAQLGRLDR 142
Query: 97 SSAASRARRSLAS---------PGISPGPLTATIGGAVAGGGPRQG------RAEAHKEV 141
R +R+LA P +SP P G A A GPR+G ++ E
Sbjct: 143 RGPQHRVQRALALSAGLEDAHLPCLSPRPSQEMRGEATAREGPREGAPTGCPEGKSCGER 202
Query: 142 FPGQRVGKMAAPMELFCWSGGWGLPSV 168
PG + P L W W P++
Sbjct: 203 RPGPGTNQPLWPASLSPWRPYWEFPAL 229
>gi|122937267 lemur tyrosine kinase 3 [Homo sapiens]
Length = 1489
Score = 38.5 bits (88), Expect = 0.012
Identities = 49/167 (29%), Positives = 57/167 (34%), Gaps = 37/167 (22%)
Query: 6 PPRSPRSGTSPKGPWSSTGHVQFGKSPQTWPRRTRPRSPEPA--------APSGVRGSTW 57
P P SG K W Q P P +PR EPA AP G G+
Sbjct: 1152 PGGGPGSGVDAKAGWVDNTRPQPPPPPLPPPPEAQPRRLEPAPPRARPEVAPEGEPGA-- 1209
Query: 58 TRRRDTPRRAGPTALSRYVGHLWMGRRPPSPEARGP-VPR----------SSAASRARRS 106
R G TALS PP PE +GP +PR +S +AR S
Sbjct: 1210 ----PDSRAGGDTALSG-------DGDPPKPERKGPEMPRLFLDLGPPQGNSEQIKARLS 1258
Query: 107 LASPGISPGPLTATIGGAVAGGGPRQGRAEAHKEVFPGQRVGKMAAP 153
S + P LT G GPR+ E G G AP
Sbjct: 1259 RLSLALPPLTLT-----PFPGPGPRRPPWEGADAGAAGGEAGGAGAP 1300
Score = 30.4 bits (67), Expect = 3.3
Identities = 18/55 (32%), Positives = 23/55 (41%), Gaps = 2/55 (3%)
Query: 81 MGRRPPSPEARGPVPRSSAASRARRSLASPGISPGP--LTATIGGAVAGGGPRQG 133
MG P RGP P R+ A P SP P A+ G ++ GP+ G
Sbjct: 766 MGAAAPQYPGRGPPPAPPPPPPPPRAPADPAASPDPPSAVASPGSGLSSPGPKPG 820
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 38.5 bits (88), Expect = 0.012
Identities = 43/137 (31%), Positives = 56/137 (40%), Gaps = 14/137 (10%)
Query: 5 GPPRSPRSGTSPKGPWSSTGHVQFGKSPQTWPRRTRPRSPEPAAPSGVRGSTWTRRRDTP 64
GPP P+ G P+GP G Q G PQ + RSP P P G + + P
Sbjct: 265 GPP--PQGGNKPQGP-PPPGKPQ-GPPPQGGSKSRSSRSP-PGKPQGPPPQGGNQPQGPP 319
Query: 65 RRAG-PTALSRYVGHLWMGRRPPSPEARGPVPRSSAASRARRSLASPGISPGPLTATIGG 123
G P G+ G PP + +GP P+ + SR+ RS PG GP
Sbjct: 320 PPPGKPQGPPPQGGNKPQGPPPPG-KPQGPPPQGGSKSRSARS--PPGKPQGPPQQEGNN 376
Query: 124 -----AVAGGGPRQGRA 135
AGG P+Q +A
Sbjct: 377 PQGPPPPAGGNPQQPQA 393
Score = 36.2 bits (82), Expect = 0.060
Identities = 39/113 (34%), Positives = 49/113 (43%), Gaps = 10/113 (8%)
Query: 5 GPPRSPRSGTSPKGPWSSTGHVQFGKSPQTWPRRTRPRSPEPAAPSGVRGSTWTRRRDTP 64
GPP P+ G P+GP G Q G PQ R+ PRSP P P G + + P
Sbjct: 80 GPP--PQGGNKPQGP-PPPGKPQ-GPPPQGDKSRS-PRSP-PGKPQGPPPQGGNQPQGPP 133
Query: 65 RRAG-PTALSRYVGHLWMGRRPPSPEARGPVPRSSAASRARRSLASPGISPGP 116
G P G+ G PP + +GP P+ SR+ RS PG GP
Sbjct: 134 PPPGKPQGPPPQGGNKPQGPPPPG-KPQGPPPQGDNKSRSSRS--PPGKPQGP 183
Score = 36.2 bits (82), Expect = 0.060
Identities = 37/113 (32%), Positives = 48/113 (42%), Gaps = 9/113 (7%)
Query: 5 GPPRSPRSGTSPKGPWSSTGHVQFGKSPQTWPRRTRPRSPEPAAPSGVRGSTWTRRRDTP 64
GPP P+ G P+GP G Q G PQ + RSP P P G + + P
Sbjct: 203 GPP--PQGGNKPQGP-PPPGKPQ-GPPPQGDNKSQSARSP-PGKPQGPPPQGGNQPQGPP 257
Query: 65 RRAG-PTALSRYVGHLWMGRRPPSPEARGPVPRSSAASRARRSLASPGISPGP 116
G P G+ G PP + +GP P+ + SR+ RS PG GP
Sbjct: 258 PPPGKPQGPPPQGGNKPQGPPPPG-KPQGPPPQGGSKSRSSRS--PPGKPQGP 307
>gi|51702222 SPT2, Suppressor of Ty, domain containing 1 [Homo
sapiens]
Length = 685
Score = 38.5 bits (88), Expect = 0.012
Identities = 60/232 (25%), Positives = 89/232 (38%), Gaps = 42/232 (18%)
Query: 87 SPEARGPVPRSSAA-SRARRSLASPGISPGPLTATIGGAVAGGGPR--QGRAEAHKEVFP 143
SP R P SS+A + +A P +S GP+ G+ + G R G + + P
Sbjct: 365 SPGVRQPGSSSSSAPGQPSTGVARPTVSSGPVPRRQNGSSSSGPERSISGSKKPTNDSNP 424
Query: 144 GQR-VGKMAAPMELFCWSGGWGLP-SVDLDSLAVLTYARFTGAPLKV------------- 188
+R V P + SGG G P S + S L +R G P+
Sbjct: 425 SRRTVSGTCGPGQPASSSGGPGRPISGSVSSARPLGSSRGPGRPVSSPHELRRPVSGLGP 484
Query: 189 --HKISNPWQSPSGTLPALRTSHGEVISVPHKIITHL---------------RKEVHTFW 231
+S P +S SG++PA RT SVP + ++ L + V +
Sbjct: 485 PGRSVSGPGRSISGSIPAGRTVSN---SVPGRPVSSLGPGQTVSSSGPTIKPKCTVVSET 541
Query: 232 IDTKNYVEVTRKWYAEAMPFPLNFFLPGRMQRQYMERLQLLTGEHRPEDEEE 283
I +KN + + M PL+ G Q +RL TG R + EE
Sbjct: 542 ISSKNIISRSSNGQMNGMKPPLS----GYRAAQGPQRLPFPTGYKRQREYEE 589
>gi|239755142 PREDICTED: hypothetical protein [Homo sapiens]
Length = 219
Score = 38.1 bits (87), Expect = 0.016
Identities = 30/84 (35%), Positives = 34/84 (40%), Gaps = 8/84 (9%)
Query: 81 MGRRPPSPEARGPVPRSSAASRARRSLASPGISPGPLTATIGGAVAGGGPRQG-RAEAHK 139
M P SP + PR R L S G G L A GGAV GGG R G RAE +
Sbjct: 1 MSMFPSSPLFKLNFPRRGRRGERRPGLRSEGRRKGLLAAEAGGAVLGGGRRAGRRAEPPE 60
Query: 140 EVFPGQRVGKMAAPMELFCWSGGW 163
+ +R M GGW
Sbjct: 61 PSYSRERRETMEG-------KGGW 77
>gi|239749631 PREDICTED: hypothetical protein [Homo sapiens]
Length = 217
Score = 38.1 bits (87), Expect = 0.016
Identities = 30/84 (35%), Positives = 34/84 (40%), Gaps = 8/84 (9%)
Query: 81 MGRRPPSPEARGPVPRSSAASRARRSLASPGISPGPLTATIGGAVAGGGPRQG-RAEAHK 139
M P SP + PR R L S G G L A GGAV GGG R G RAE +
Sbjct: 1 MSMFPSSPLFKLNFPRRGRRGERRPGLRSEGRRKGLLAAEAGGAVLGGGRRAGRRAEPPE 60
Query: 140 EVFPGQRVGKMAAPMELFCWSGGW 163
+ +R M GGW
Sbjct: 61 PSYSRERRETMEG-------KGGW 77
>gi|239743906 PREDICTED: hypothetical protein XP_002342988 [Homo
sapiens]
Length = 217
Score = 38.1 bits (87), Expect = 0.016
Identities = 30/84 (35%), Positives = 34/84 (40%), Gaps = 8/84 (9%)
Query: 81 MGRRPPSPEARGPVPRSSAASRARRSLASPGISPGPLTATIGGAVAGGGPRQG-RAEAHK 139
M P SP + PR R L S G G L A GGAV GGG R G RAE +
Sbjct: 1 MSMFPSSPLFKLNFPRRGRRGERRPGLRSEGRRKGLLAAEAGGAVLGGGRRAGRRAEPPE 60
Query: 140 EVFPGQRVGKMAAPMELFCWSGGW 163
+ +R M GGW
Sbjct: 61 PSYSRERRETMEG-------KGGW 77
>gi|38787970 tensin like C1 domain containing phosphatase isoform 3
[Homo sapiens]
Length = 1285
Score = 38.1 bits (87), Expect = 0.016
Identities = 34/125 (27%), Positives = 45/125 (36%), Gaps = 14/125 (11%)
Query: 5 GPPRSPRSGTSPKGPWSSTGHVQFGKSPQTWPRRTRPRSPEPAAPSGVRGSTWTRRRDTP 64
GP S SP P SS +SP PRSP P G+R + W R P
Sbjct: 841 GPEPLAPSPVSPTFPPSSPSDWPQERSPGGHSDGASPRSPVPTTLPGLRHAPWQGPRGPP 900
Query: 65 RRAGPTALSRYVGHL-WMGRRPPSPEARGPVPRSSAASR------------ARRSLASPG 111
+ L+ + W+ P P++ P P A+ +R L PG
Sbjct: 901 DSPDGSPLTPVPSQMPWLVASPEPPQS-SPTPAFPLAASYDTNGLSQPPLPEKRHLPGPG 959
Query: 112 ISPGP 116
PGP
Sbjct: 960 QQPGP 964
>gi|38787957 tensin like C1 domain containing phosphatase isoform 2
[Homo sapiens]
Length = 1409
Score = 38.1 bits (87), Expect = 0.016
Identities = 34/125 (27%), Positives = 45/125 (36%), Gaps = 14/125 (11%)
Query: 5 GPPRSPRSGTSPKGPWSSTGHVQFGKSPQTWPRRTRPRSPEPAAPSGVRGSTWTRRRDTP 64
GP S SP P SS +SP PRSP P G+R + W R P
Sbjct: 965 GPEPLAPSPVSPTFPPSSPSDWPQERSPGGHSDGASPRSPVPTTLPGLRHAPWQGPRGPP 1024
Query: 65 RRAGPTALSRYVGHL-WMGRRPPSPEARGPVPRSSAASR------------ARRSLASPG 111
+ L+ + W+ P P++ P P A+ +R L PG
Sbjct: 1025 DSPDGSPLTPVPSQMPWLVASPEPPQS-SPTPAFPLAASYDTNGLSQPPLPEKRHLPGPG 1083
Query: 112 ISPGP 116
PGP
Sbjct: 1084 QQPGP 1088
>gi|38787941 tensin like C1 domain containing phosphatase isoform 1
[Homo sapiens]
Length = 1419
Score = 38.1 bits (87), Expect = 0.016
Identities = 34/125 (27%), Positives = 45/125 (36%), Gaps = 14/125 (11%)
Query: 5 GPPRSPRSGTSPKGPWSSTGHVQFGKSPQTWPRRTRPRSPEPAAPSGVRGSTWTRRRDTP 64
GP S SP P SS +SP PRSP P G+R + W R P
Sbjct: 975 GPEPLAPSPVSPTFPPSSPSDWPQERSPGGHSDGASPRSPVPTTLPGLRHAPWQGPRGPP 1034
Query: 65 RRAGPTALSRYVGHL-WMGRRPPSPEARGPVPRSSAASR------------ARRSLASPG 111
+ L+ + W+ P P++ P P A+ +R L PG
Sbjct: 1035 DSPDGSPLTPVPSQMPWLVASPEPPQS-SPTPAFPLAASYDTNGLSQPPLPEKRHLPGPG 1093
Query: 112 ISPGP 116
PGP
Sbjct: 1094 QQPGP 1098
>gi|188536004 zinc finger protein 469 [Homo sapiens]
Length = 3925
Score = 37.7 bits (86), Expect = 0.021
Identities = 41/155 (26%), Positives = 61/155 (39%), Gaps = 14/155 (9%)
Query: 4 GGPPRSPRSGTSPKGPWSSTGHVQFGKSPQTWPRRTRP---RSPEPAAPSGVRGSTWTRR 60
GGP + R +PK P + + S +T P P + PE A S + +T
Sbjct: 1159 GGPKCADRPSVAPKDPLQVPTNTE--TSEETRPSLDFPQEAKEPETAEESAPDSTEFTEA 1216
Query: 61 RDTPRRAGPTALSRYVGHLWMGRRPPSPEARG-PVPRSSAASRARRSLASPGISPGPLTA 119
+P A + G L + PPS G P P S A+ A G SP P
Sbjct: 1217 LRSPPAACAGEMGASPGLLIPEQPPPSRHDTGTPKPSGSLANTAPH-----GSSPTP--- 1268
Query: 120 TIGGAVAGGGPRQGRAEAHKEVFPGQRVGKMAAPM 154
+G + G G Q + + P ++ G+ AP+
Sbjct: 1269 GVGSLLGGPGGTQAPVSHNSKDPPARQPGEFLAPV 1303
>gi|224465238 hypothetical protein LOC283999 [Homo sapiens]
Length = 394
Score = 37.4 bits (85), Expect = 0.027
Identities = 38/115 (33%), Positives = 43/115 (37%), Gaps = 23/115 (20%)
Query: 8 RSPRSGTSPKGPWSSTGHVQFG-----KSPQTWPRRTRPRSPE---PAAPSGVRGSTWTR 59
R+ G SP G W + +F SP R RP+ PA P G RG R
Sbjct: 79 RAQGPGASPWGRWDWSPSPRFAARLSTSSPFPQGRAQRPQRGGVDLPATPGGPRGQCAGR 138
Query: 60 RRDTPRRAGPTALSRYVGHLWMGRRPPSPEARGPVPRSSAASRARRSLASPGISP 114
D RRAG R P P R P PR A R R A+P SP
Sbjct: 139 SGDVLRRAG------------RRRARPPPVPRLPAPR---APRRPRGPATPDPSP 178
>gi|113416996 PREDICTED: ankyrin repeat domain 33B [Homo sapiens]
Length = 1006
Score = 37.4 bits (85), Expect = 0.027
Identities = 44/153 (28%), Positives = 53/153 (34%), Gaps = 35/153 (22%)
Query: 4 GGPPRSPRSGTSPKGPWSSTGHVQFGKSPQTWPRRTRPRSPEPAAPSGVRGSTWTRRRDT 63
G PP+ P T+P W +SP T PR T P P+ G + +R
Sbjct: 315 GTPPQQP---TAPSSEWPGPQ-----RSPGTGPRWTAPLPRPAPLPAKRPGDSPASKRPR 366
Query: 64 PRRAGPTALSRYVGHLWMGRRPPSPEARGPVPRSSAASRARRSLASPGISPGPLTATIGG 123
P P A R PP E P+ S AA GP T G
Sbjct: 367 PGGVSPEA-----------RDPPKGE--NPLCSSEAAGET-----------GP-TQVRGP 401
Query: 124 AVAGGGPRQGRAEAHKEVFPGQRVGKMAAPMEL 156
GGG QG+ K PG+ V AP L
Sbjct: 402 DALGGGRLQGKGREGKA--PGEGVSPRPAPPRL 432
>gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens]
Length = 1120
Score = 37.4 bits (85), Expect = 0.027
Identities = 45/153 (29%), Positives = 55/153 (35%), Gaps = 34/153 (22%)
Query: 5 GPPRSPRSGTSPKGPWSSTGHVQFGKSPQTWPRRTRPR-------SPEP------AAPSG 51
G P SP G P PW+ + P T P RP+ P P G
Sbjct: 679 GSPSSPAPGPPPGAPWAFS---YLAGPPATPPDPPRPKRRSHSLSRPGPTEGDAEGEAEG 735
Query: 52 VRGSTWTRRRDTPRRAGPTALSRYVGHLWMGRRPPSPEARGPVPRSSAASRARR------ 105
GST RR G +AL R + P+P ARG S A RARR
Sbjct: 736 PVGSTLGSYATLTRRPGRSALVRTSPSV-----TPTP-ARGTPRSQSFALRARRKGPPPP 789
Query: 106 ------SLASPGISPGPLTATIGGAVAGGGPRQ 132
S++ P P PL + G GPR+
Sbjct: 790 PPKRLSSVSGPSPEPPPLDESPGPKEGATGPRR 822
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.135 0.424
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,267,706
Number of Sequences: 37866
Number of extensions: 1228544
Number of successful extensions: 6780
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 391
Number of HSP's that attempted gapping in prelim test: 6212
Number of HSP's gapped (non-prelim): 877
length of query: 435
length of database: 18,247,518
effective HSP length: 105
effective length of query: 330
effective length of database: 14,271,588
effective search space: 4709624040
effective search space used: 4709624040
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.