Guide to the Human Genome
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Name: ZNF517 Sequence: fasta or formatted (492aa) NCBI GI: 125490356
Description:

zinc finger protein 517

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.7         43           2
 C cysteine            5.3         26           1
 D aspartate           2.0         10           1
 E glutamate           7.1         35           2
 F phenylalanine       3.9         19           1
 G glycine             9.6         47           2
 H histidine           6.1         30           2
 I isoleucine          2.4         12           2
 K lysine              4.7         23           1
 L leucine             9.6         47           4
 M methionine          1.2          6           1
 N asparagine          1.4          7           1
 P proline             7.1         35           2
 Q glutamine           5.5         27           2
 R arginine            9.1         45           2
 S serine              6.1         30           2
 T threonine           3.9         19           1
 V valine              3.5         17           2
 W tryptophan          0.8          4           1
 Y tyrosine            2.0         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 517 
ZNF251                0.383   zinc finger protein 251 
ZNF383                0.358   zinc finger protein 383 
ZNF250                0.355   zinc finger protein 250 isoform b 
ZNF565                0.353   zinc finger protein 565 
ZNF565                0.353   zinc finger protein 565 
ZNF595                0.350   zinc finger protein 595 
ZNF250                0.349   zinc finger protein 250 isoform a 
DKFZp686E2433         0.348   hypothetical protein LOC345462 
ZNF74                 0.345   zinc finger protein 74 
ZNF7                  0.343   zinc finger protein 7 
ZNF135                0.343   zinc finger protein 135 
ZNF184                0.341   zinc finger protein 184 
ZNF420                0.338   zinc finger protein 420 
ZNF454                0.335   zinc finger protein 454 
ZNF436                0.332   zinc finger protein 436 
ZNF436                0.332   zinc finger protein 436 
ZNF30                 0.331   zinc finger protein 30 isoform b 
ZNF19                 0.331   zinc finger protein 19 
ZNF665                0.325   zinc finger protein 665 
ZNF480                0.325   zinc finger protein 480 
ZNF16                 0.325   zinc finger protein 16 
ZNF16                 0.325   zinc finger protein 16 
ZNF167                0.320   zinc finger protein 167 isoform 1 
ZNF79                 0.317   zinc finger protein 79 
ZNF93                 0.314   zinc finger protein 93 
ZNF543                0.314   zinc finger protein 543 
ZNF624                0.311   zinc finger protein 624 
ZNF471                0.310   zinc finger protein 471 
ZNF160                0.309   zinc finger protein 160 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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