Guide to the Human Genome
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Name: ZNF93 Sequence: fasta or formatted (620aa) NCBI GI: 38708324
Description:

zinc finger protein 93

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.2         26           1
 C cysteine            6.1         38           1
 D aspartate           1.6         10           1
 E glutamate           8.5         53           2
 F phenylalanine       4.4         27           1
 G glycine             6.3         39           2
 H histidine           7.3         45           1
 I isoleucine          5.5         34           2
 K lysine             15.2         94           2
 L leucine             5.3         33           1
 M methionine          0.8          5           1
 N asparagine          3.4         21           1
 P proline             3.5         22           1
 Q glutamine           2.6         16           1
 R arginine            3.4         21           2
 S serine              8.4         52           3
 T threonine           6.8         42           3
 V valine              2.6         16           2
 W tryptophan          0.5          3           1
 Y tyrosine            3.7         23           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 93 
ZNF66                 0.741   PREDICTED: zinc finger protein 66 
ZNF66                 0.741   PREDICTED: zinc finger protein 66 
ZNF66                 0.729   PREDICTED: zinc finger protein 66 
ZNF726                0.716   PREDICTED: zinc finger protein 726 
ZNF737                0.716   PREDICTED: zinc finger protein 737 
ZNF726                0.716   PREDICTED: zinc finger protein 726 
ZNF737                0.716   PREDICTED: zinc finger protein 737 
ZNF726                0.716   PREDICTED: zinc finger protein 726 
ZNF737                0.716   PREDICTED: zinc finger protein 737 
ZNF85                 0.702   zinc finger protein 85 
ZNF99                 0.701   zinc finger protein 99 
ZNF429                0.700   zinc finger protein 429 
ZNF91                 0.695   zinc finger protein 91 
ZNF254                0.687   zinc finger protein 254 
ZNF43                 0.684   zinc finger protein 43 
ZNF208                0.678   zinc finger protein 208 
ZNF728                0.676   PREDICTED: zinc finger protein 728 
ZNF728                0.674   PREDICTED: zinc finger protein 728 
ZNF728                0.674   PREDICTED: zinc finger protein 728 
ZNF737                0.673   zinc finger protein 737 
ZNF493                0.669   zinc finger protein 493 isoform 3 
ZNF90                 0.669   zinc finger protein 90 
ZNF681                0.666   zinc finger protein 681 
ZNF708                0.659   zinc finger protein 708 
ZNF595                0.658   zinc finger protein 595 
ZNF92                 0.650   zinc finger protein 92 isoform 2 
ZNF676                0.643   zinc finger protein 676 
ZNF675                0.633   zinc finger protein 675 
ZNF98                 0.628   zinc finger protein 98 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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