Guide to the Human Genome
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Name: ZNF7 Sequence: fasta or formatted (686aa) NCBI GI: 4508035
Description:

zinc finger protein 7

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.5         31           1
 C cysteine            6.0         41           1
 D aspartate           2.9         20           1
 E glutamate           8.3         57           2
 F phenylalanine       4.2         29           1
 G glycine             7.9         54           1
 H histidine           5.8         40           2
 I isoleucine          4.8         33           2
 K lysine              7.7         53           2
 L leucine             6.1         42           1
 M methionine          1.0          7           1
 N asparagine          2.6         18           2
 P proline             3.8         26           1
 Q glutamine           7.6         52           2
 R arginine            6.0         41           1
 S serine              8.3         57           3
 T threonine           5.4         37           1
 V valine              3.6         25           2
 W tryptophan          1.0          7           1
 Y tyrosine            2.3         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 7 
ZNF420                0.422   zinc finger protein 420 
ZNF184                0.418   zinc finger protein 184 
LOC100287429          0.416   PREDICTED: hypothetical protein XP_002343926 isofor...
LOC100287429          0.416   PREDICTED: hypothetical protein XP_002343925 isofor...
LOC100287429          0.416   PREDICTED: hypothetical protein XP_002343927 isofor...
ZNF84                 0.416   zinc finger protein 84 
ZNF84                 0.416   zinc finger protein 84 
ZNF160                0.405   zinc finger protein 160 
ZNF160                0.405   zinc finger protein 160 
ZNF160                0.405   zinc finger protein 160 
ZNF665                0.404   zinc finger protein 665 
ZNF624                0.402   zinc finger protein 624 
ZNF347                0.402   zinc finger protein 347 
ZNF91                 0.399   zinc finger protein 91 
ZNF208                0.398   zinc finger protein 208 
ZNF585B               0.397   zinc finger protein 585B 
ZNF268                0.393   zinc finger protein 268 
ZNF726                0.392   PREDICTED: zinc finger protein 726 
ZNF726                0.392   PREDICTED: zinc finger protein 726 
ZNF726                0.392   PREDICTED: zinc finger protein 726 
ZNF546                0.391   zinc finger protein 546 
ZNF43                 0.390   zinc finger protein 43 
ZNF607                0.389   zinc finger protein 607 
ZNF569                0.388   zinc finger protein 569 
ZNF135                0.386   zinc finger protein 135 
ZNF780B               0.382   zinc finger protein 780B 
ZNF99                 0.382   zinc finger protein 99 
ZNF616                0.381   zinc finger protein 616 
ZNF23                 0.381   zinc finger protein 23 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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