Guide to the Human Genome
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Name: HSPA14 Sequence: fasta or formatted (509aa) NCBI GI: 82880658
Description:

heat shock 70kDa protein 14 isoform 1

Referenced in:

Heat-Shock Proteins and Chaperonins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.4         48           2
 C cysteine            2.4         12           1
 D aspartate           5.9         30           2
 E glutamate           6.9         35           2
 F phenylalanine       3.5         18           1
 G glycine             7.7         39           2
 H histidine           1.6          8           1
 I isoleucine          6.5         33           1
 K lysine              6.1         31           2
 L leucine            10.0         51           2
 M methionine          1.6          8           2
 N asparagine          4.7         24           1
 P proline             3.1         16           2
 Q glutamine           3.3         17           2
 R arginine            4.5         23           2
 S serine              8.6         44           3
 T threonine           4.7         24           1
 V valine              7.7         39           2
 W tryptophan          0.0          0           0
 Y tyrosine            1.8          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   heat shock 70kDa protein 14 isoform 1 
HSPA2                 0.306   heat shock 70kDa protein 2 
HSPA6                 0.304   heat shock 70kDa protein 6 (HSP70B') 
HSPA1B                0.301   heat shock 70kDa protein 1B 
HSPA1A                0.301   heat shock 70kDa protein 1A 
HSPA1L                0.299   heat shock 70kDa protein 1-like 
HSPA8                 0.295   heat shock 70kDa protein 8 isoform 1 
HSPA5                 0.292   heat shock 70kDa protein 5 
HSPA8                 0.281   heat shock 70kDa protein 8 isoform 2 
HSPA9                 0.226   heat shock 70kDa protein 9 precursor 
HSPH1                 0.173   heat shock 105kD 
HSPA4                 0.172   heat shock 70kDa protein 4 
HSPA4L                0.170   heat shock 70kDa protein 4-like 
HSPA13                0.150   heat shock protein 70kDa family member 13 precursor ...
HYOU1                 0.134   hypoxia up-regulated 1 precursor 
HYOU1                 0.134   hypoxia up-regulated 1 precursor 
GALK2                 0.005   galactokinase 2 isoform 2 
GALK2                 0.005   galactokinase 2 isoform 1 
RASAL2                0.005   RAS protein activator like 2 isoform 2 
MAP2K4                0.004   mitogen-activated protein kinase kinase 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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