Guide to the Human Genome
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Name: FLNA Sequence: fasta or formatted (2639aa) NCBI GI: 116063573
Description:

filamin A, alpha isoform 1

Referenced in:

Cytoskeleton

Other entries for this name:
alt prot [2647aa] filamin A, alpha isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.2        190           2
 C cysteine            1.8         48           1
 D aspartate           5.6        147           2
 E glutamate           6.1        160           3
 F phenylalanine       2.9         76           1
 G glycine            11.4        300           3
 H histidine           2.4         64           2
 I isoleucine          4.2        112           2
 K lysine              6.1        160           2
 L leucine             5.3        139           2
 M methionine          1.1         29           1
 N asparagine          3.0         78           2
 P proline             8.0        210           2
 Q glutamine           3.6         94           2
 R arginine            3.5         93           4
 S serine              7.0        184           3
 T threonine           6.6        175           2
 V valine             10.5        278           3
 W tryptophan          0.6         17           1
 Y tyrosine            3.2         85           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   filamin A, alpha isoform 1 
FLNA                  0.999   filamin A, alpha isoform 2 
FLNB                  0.705   filamin B, beta (actin binding protein 278) 
FLNC                  0.617   gamma filamin isoform a 
FLNC                  0.613   gamma filamin isoform b 
LOC100291695          0.031   PREDICTED: similar to spectrin, beta, non-erythrocy...
ACTN4                 0.026   actinin, alpha 4 
ACTN3                 0.025   actinin, alpha 3 
ACTN2                 0.024   actinin, alpha 2 
ACTN1                 0.024   actinin, alpha 1 isoform c 
ACTN1                 0.024   actinin, alpha 1 isoform a 
ACTN1                 0.024   actinin, alpha 1 isoform b 
SPTBN1                0.022   spectrin, beta, non-erythrocytic 1 isoform 1 
SPTBN1                0.022   spectrin, beta, non-erythrocytic 1 isoform 2 
PLEC1                 0.022   plectin 1 isoform 1 
SPTB                  0.022   spectrin beta isoform a 
SPTB                  0.022   spectrin beta isoform b 
MACF1                 0.021   microfilament and actin filament cross-linker protei...
PLEC1                 0.021   plectin 1 isoform 11 
PLEC1                 0.021   plectin 1 isoform 10 
PLEC1                 0.021   plectin 1 isoform 8 
PLEC1                 0.021   plectin 1 isoform 7 
PLEC1                 0.021   plectin 1 isoform 6 
PLEC1                 0.021   plectin 1 isoform 3 
PLEC1                 0.021   plectin 1 isoform 2 
DST                   0.021   dystonin isoform 4 
DST                   0.021   dystonin isoform 3 
DST                   0.021   dystonin isoform 2 
DST                   0.021   dystonin isoform 1 
SPTBN4                0.021   spectrin, beta, non-erythrocytic 4 isoform sigma1 [...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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