DEPDC1B 14668

Name: DEPDC1B	Sequence: fasta or formatted (529aa)		NCBI GI: 223633999
Description: DEP domain containing 1B isoform 1		Referenced in: Additional Interaction Domain Families
Other entries for this name: alt prot [467aa] DEP domain containing 1B isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.1 27 2 C cysteine 2.5 13 2 D aspartate 4.2 22 2 E glutamate 8.1 43 2 F phenylalanine 4.9 26 1 G glycine 3.0 16 1 H histidine 2.5 13 1 I isoleucine 4.2 22 2 K lysine 8.9 47 4 L leucine 12.1 64 3 M methionine 3.0 16 2 N asparagine 3.2 17 1 P proline 7.4 39 2 Q glutamine 4.7 25 1 R arginine 6.0 32 2 S serine 5.5 29 2 T threonine 3.6 19 1 V valine 6.4 34 2 W tryptophan 1.7 9 1 Y tyrosine 3.0 16 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 DEP domain containing 1B isoform 1 DEPDC1B 0.836 DEP domain containing 1B isoform 2 DEPDC1 0.496 DEP domain containing 1 isoform b DEPDC1 0.275 DEP domain containing 1 isoform a DEPDC7 0.085 novel 58.3 KDA protein isoform 2 DEPDC7 0.085 novel 58.3 KDA protein isoform 1 DEPDC4 0.035 DEP domain containing 4 SH3BP1 0.020 SH3-domain binding protein 1 ARHGAP19 0.016 Rho GTPase activating protein 19 STARD8 0.016 StAR-related lipid transfer (START) domain containi... STARD8 0.016 StAR-related lipid transfer (START) domain containi... STARD8 0.016 StAR-related lipid transfer (START) domain containin... DLC1 0.015 deleted in liver cancer 1 isoform 1 DLC1 0.015 deleted in liver cancer 1 isoform 2 ARHGAP30 0.014 Rho GTPase activating protein 30 isoform 2 ARHGAP30 0.014 Rho GTPase activating protein 30 isoform 1 ARHGAP17 0.013 nadrin isoform 1 ARHGAP17 0.013 nadrin isoform 2 DEPDC6 0.013 DEP domain containing 6 FLJ30058 0.013 hypothetical protein LOC158763 ARHGAP18 0.013 Rho GTPase activating protein 18 MYO9A 0.012 myosin IXA STARD13 0.012 StAR-related lipid transfer (START) domain containin... STARD13 0.012 StAR-related lipid transfer (START) domain containin... STARD13 0.012 StAR-related lipid transfer (START) domain containin... ARHGAP6 0.011 Rho GTPase activating protein 6 isoform 4 ARHGAP6 0.011 Rho GTPase activating protein 6 isoform 3 ARHGAP6 0.011 Rho GTPase activating protein 6 isoform 1 CDGAP 0.011 Cdc42 GTPase-activating protein RICH2 0.011 Rho GTPase-activating protein RICH2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.