Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ARHGAP28 Sequence: fasta or formatted (563aa) NCBI GI: 59710111
Description:

Rho GTPase activating protein 28 isoform b

Referenced in:

Rho and Rac

Other entries for this name:
alt prot [570aa] Rho GTPase activating protein 28 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         38           2
 C cysteine            0.5          3           1
 D aspartate           5.3         30           3
 E glutamate           7.6         43           2
 F phenylalanine       5.2         29           2
 G glycine             3.9         22           1
 H histidine           2.0         11           1
 I isoleucine          4.8         27           2
 K lysine              9.8         55           2
 L leucine            10.3         58           3
 M methionine          3.0         17           1
 N asparagine          4.3         24           2
 P proline             5.0         28           2
 Q glutamine           3.6         20           1
 R arginine            6.2         35           2
 S serine              8.0         45           1
 T threonine           5.2         29           2
 V valine              6.6         37           1
 W tryptophan          0.9          5           1
 Y tyrosine            1.2          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Rho GTPase activating protein 28 isoform b 
ARHGAP28              0.914   Rho GTPase activating protein 28 isoform a 
ARHGAP18              0.284   Rho GTPase activating protein 18 
C20orf95              0.211   PREDICTED: chromosome 20 open reading frame 95 [Hom...
C20orf95              0.211   PREDICTED: chromosome 20 open reading frame 95 [Hom...
C20orf95              0.211   PREDICTED: Rho GTPase-activating protein 18-like [H...
FAM13A                0.061   family with sequence similarity 13, member A1 isofor...
BCR                   0.061   breakpoint cluster region isoform 1 
BCR                   0.058   breakpoint cluster region isoform 2 
ARHGAP15              0.055   ARHGAP15 
ABR                   0.055   active breakpoint cluster region-related  protein i...
DLC1                  0.055   deleted in liver cancer 1 isoform 1 
DLC1                  0.055   deleted in liver cancer 1 isoform 2 
ABR                   0.055   active breakpoint cluster region-related  protein is...
ABR                   0.055   active breakpoint cluster region-related  protein is...
ARHGAP12              0.051   Rho GTPase activating protein 12 
STARD13               0.051   StAR-related lipid transfer (START) domain containin...
STARD13               0.051   StAR-related lipid transfer (START) domain containin...
STARD13               0.051   StAR-related lipid transfer (START) domain containin...
ARHGAP27              0.050   Rho GTPase activating protein 27 isoform b 
ARHGAP27              0.050   Rho GTPase activating protein 27 isoform a 
ARHGAP6               0.047   Rho GTPase activating protein 6 isoform 4 
ARHGAP6               0.047   Rho GTPase activating protein 6 isoform 3 
ARHGAP6               0.047   Rho GTPase activating protein 6 isoform 1 
RALBP1                0.047   ralA binding protein 1 
STARD8                0.047   StAR-related lipid transfer (START) domain containi...
STARD8                0.047   StAR-related lipid transfer (START) domain containi...
STARD8                0.047   StAR-related lipid transfer (START) domain containin...
MYO9A                 0.046   myosin IXA 
GRLF1                 0.044   glucocorticoid receptor DNA binding factor 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press