Guide to the Human Genome
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Name: ARHGAP28 Sequence: fasta or formatted (570aa) NCBI GI: 59710113
Description:

Rho GTPase activating protein 28 isoform a

Referenced in:

Rho and Rac

Other entries for this name:
alt prot [563aa] Rho GTPase activating protein 28 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         38           2
 C cysteine            0.9          5           1
 D aspartate           5.6         32           3
 E glutamate           7.5         43           2
 F phenylalanine       4.6         26           2
 G glycine             4.2         24           2
 H histidine           1.9         11           1
 I isoleucine          5.4         31           2
 K lysine              9.3         53           2
 L leucine             9.8         56           3
 M methionine          3.0         17           1
 N asparagine          4.4         25           2
 P proline             5.3         30           2
 Q glutamine           4.2         24           2
 R arginine            5.8         33           2
 S serine              8.1         46           2
 T threonine           4.4         25           2
 V valine              6.5         37           1
 W tryptophan          0.7          4           1
 Y tyrosine            1.8         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Rho GTPase activating protein 28 isoform a 
ARHGAP28              0.900   Rho GTPase activating protein 28 isoform b 
ARHGAP18              0.328   Rho GTPase activating protein 18 
C20orf95              0.252   PREDICTED: chromosome 20 open reading frame 95 [Hom...
C20orf95              0.252   PREDICTED: chromosome 20 open reading frame 95 [Hom...
C20orf95              0.252   PREDICTED: Rho GTPase-activating protein 18-like [H...
BCR                   0.060   breakpoint cluster region isoform 1 
FAM13A                0.059   family with sequence similarity 13, member A1 isofor...
BCR                   0.057   breakpoint cluster region isoform 2 
ARHGAP15              0.054   ARHGAP15 
ABR                   0.054   active breakpoint cluster region-related  protein i...
DLC1                  0.054   deleted in liver cancer 1 isoform 1 
DLC1                  0.054   deleted in liver cancer 1 isoform 2 
ABR                   0.054   active breakpoint cluster region-related  protein is...
ABR                   0.054   active breakpoint cluster region-related  protein is...
ARHGAP12              0.050   Rho GTPase activating protein 12 
STARD13               0.050   StAR-related lipid transfer (START) domain containin...
STARD13               0.050   StAR-related lipid transfer (START) domain containin...
STARD13               0.050   StAR-related lipid transfer (START) domain containin...
ARHGAP27              0.049   Rho GTPase activating protein 27 isoform b 
ARHGAP27              0.049   Rho GTPase activating protein 27 isoform a 
ARHGAP6               0.046   Rho GTPase activating protein 6 isoform 4 
ARHGAP6               0.046   Rho GTPase activating protein 6 isoform 3 
ARHGAP6               0.046   Rho GTPase activating protein 6 isoform 1 
RALBP1                0.046   ralA binding protein 1 
STARD8                0.046   StAR-related lipid transfer (START) domain containi...
STARD8                0.046   StAR-related lipid transfer (START) domain containi...
STARD8                0.046   StAR-related lipid transfer (START) domain containin...
GRLF1                 0.044   glucocorticoid receptor DNA binding factor 1 
MYO9A                 0.043   myosin IXA 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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