Guide to the Human Genome
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Name: ARHGAP6 Sequence: fasta or formatted (765aa) NCBI GI: 95091988
Description:

Rho GTPase activating protein 6 isoform 3

Referenced in:

Rho and Rac

Other entries for this name:
alt prot [771aa] Rho GTPase activating protein 6 isoform 4
alt prot [974aa] Rho GTPase activating protein 6 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9         53           2
 C cysteine            1.4         11           2
 D aspartate           5.4         41           2
 E glutamate           5.6         43           3
 F phenylalanine       3.3         25           1
 G glycine             6.1         47           3
 H histidine           1.7         13           1
 I isoleucine          2.9         22           2
 K lysine              5.8         44           2
 L leucine            12.2         93           4
 M methionine          1.7         13           1
 N asparagine          3.0         23           2
 P proline             7.1         54           3
 Q glutamine           5.1         39           2
 R arginine            6.9         53           3
 S serine             14.5        111           3
 T threonine           3.4         26           1
 V valine              4.4         34           2
 W tryptophan          0.9          7           1
 Y tyrosine            1.7         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Rho GTPase activating protein 6 isoform 3 
ARHGAP6               0.943   Rho GTPase activating protein 6 isoform 1 
ARHGAP6               0.666   Rho GTPase activating protein 6 isoform 4 
FLJ30058              0.175   hypothetical protein LOC158763 
ARHGAP1               0.049   Rho GTPase activating protein 1 
SRGAP3                0.049   SLIT-ROBO Rho GTPase activating protein 3 isoform b ...
SRGAP3                0.049   SLIT-ROBO Rho GTPase activating protein 3 isoform a ...
CHN1                  0.048   chimerin (chimaerin) 1 isoform a 
CHN1                  0.048   chimerin (chimaerin) 1 isoform b 
FAM13A                0.047   family with sequence similarity 13, member A1 isofor...
ARHGAP24              0.046   Rho GTPase activating protein 24 isoform 3 
ARHGAP24              0.046   Rho GTPase activating protein 24 isoform 2 
ARHGAP24              0.046   Rho GTPase activating protein 24 isoform 1 
ARHGAP21              0.046   Rho GTPase activating protein 21 
MYO9A                 0.045   myosin IXA 
DLC1                  0.045   deleted in liver cancer 1 isoform 1 
DLC1                  0.045   deleted in liver cancer 1 isoform 2 
SH3BP1                0.044   SH3-domain binding protein 1 
ARHGAP22              0.044   Rho GTPase activating protein 2 
ARHGAP12              0.044   Rho GTPase activating protein 12 
ARHGAP23              0.044   Rho GTPase activating protein 23 
STARD8                0.044   StAR-related lipid transfer (START) domain containi...
STARD8                0.044   StAR-related lipid transfer (START) domain containi...
STARD8                0.044   StAR-related lipid transfer (START) domain containin...
C20orf95              0.042   PREDICTED: chromosome 20 open reading frame 95 [Hom...
C20orf95              0.042   PREDICTED: chromosome 20 open reading frame 95 [Hom...
C20orf95              0.042   PREDICTED: Rho GTPase-activating protein 18-like [H...
ARHGAP18              0.042   Rho GTPase activating protein 18 
STARD13               0.040   StAR-related lipid transfer (START) domain containin...
STARD13               0.040   StAR-related lipid transfer (START) domain containin...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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