Guide to the Human Genome
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Name: ARHGAP6 Sequence: fasta or formatted (974aa) NCBI GI: 95091875
Description:

Rho GTPase activating protein 6 isoform 1

Referenced in:

Rho and Rac

Other entries for this name:
alt prot [771aa] Rho GTPase activating protein 6 isoform 4
alt prot [765aa] Rho GTPase activating protein 6 isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.8         76           5
 C cysteine            1.3         13           2
 D aspartate           5.9         57           2
 E glutamate           6.2         60           3
 F phenylalanine       2.6         25           1
 G glycine             7.1         69           3
 H histidine           1.7         17           1
 I isoleucine          2.7         26           2
 K lysine              5.1         50           2
 L leucine            10.6        103           3
 M methionine          1.3         13           1
 N asparagine          2.7         26           2
 P proline             8.0         78           4
 Q glutamine           5.7         56           2
 R arginine            6.8         66           3
 S serine             13.7        133           3
 T threonine           4.0         39           1
 V valine              4.1         40           2
 W tryptophan          1.3         13           1
 Y tyrosine            1.4         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Rho GTPase activating protein 6 isoform 1 
ARHGAP6               0.785   Rho GTPase activating protein 6 isoform 4 
ARHGAP6               0.730   Rho GTPase activating protein 6 isoform 3 
FLJ30058              0.135   hypothetical protein LOC158763 
SRGAP3                0.038   SLIT-ROBO Rho GTPase activating protein 3 isoform b ...
SRGAP3                0.038   SLIT-ROBO Rho GTPase activating protein 3 isoform a ...
ARHGAP1               0.038   Rho GTPase activating protein 1 
CHN1                  0.037   chimerin (chimaerin) 1 isoform a 
CHN1                  0.037   chimerin (chimaerin) 1 isoform b 
FAM13A                0.036   family with sequence similarity 13, member A1 isofor...
ARHGAP24              0.036   Rho GTPase activating protein 24 isoform 3 
ARHGAP24              0.036   Rho GTPase activating protein 24 isoform 2 
ARHGAP24              0.036   Rho GTPase activating protein 24 isoform 1 
ARHGAP21              0.035   Rho GTPase activating protein 21 
SH3BP1                0.035   SH3-domain binding protein 1 
MYO9A                 0.035   myosin IXA 
DLC1                  0.035   deleted in liver cancer 1 isoform 1 
DLC1                  0.035   deleted in liver cancer 1 isoform 2 
ARHGAP22              0.034   Rho GTPase activating protein 2 
ARHGAP12              0.034   Rho GTPase activating protein 12 
ARHGAP23              0.034   Rho GTPase activating protein 23 
STARD8                0.034   StAR-related lipid transfer (START) domain containi...
STARD8                0.034   StAR-related lipid transfer (START) domain containi...
STARD8                0.034   StAR-related lipid transfer (START) domain containin...
TAGAP                 0.033   T-cell activation Rho GTPase-activating protein isof...
C20orf95              0.032   PREDICTED: chromosome 20 open reading frame 95 [Hom...
C20orf95              0.032   PREDICTED: chromosome 20 open reading frame 95 [Hom...
C20orf95              0.032   PREDICTED: Rho GTPase-activating protein 18-like [H...
ARHGAP18              0.032   Rho GTPase activating protein 18 
STARD13               0.031   StAR-related lipid transfer (START) domain containin...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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