Guide to the Human Genome
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Name: STARD8 Sequence: fasta or formatted (1103aa) NCBI GI: 215820650
Description:

StAR-related lipid transfer (START) domain containing 8 isoform a

Referenced in:

Liver

Other entries for this name:
alt prot [1023aa] StAR-related lipid transfer (START) domain containing 8 isoform b
alt prot [1023aa] StAR-related lipid transfer (START) domain containing 8 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.6        106           3
 C cysteine            2.4         26           1
 D aspartate           4.6         51           2
 E glutamate           7.6         84           5
 F phenylalanine       2.9         32           1
 G glycine             6.2         68           2
 H histidine           2.9         32           1
 I isoleucine          2.1         23           1
 K lysine              4.2         46           2
 L leucine            10.4        115           3
 M methionine          2.4         26           1
 N asparagine          2.4         26           2
 P proline             7.9         87           2
 Q glutamine           5.7         63           2
 R arginine            6.3         69           2
 S serine             10.0        110           3
 T threonine           3.6         40           3
 V valine              5.2         57           2
 W tryptophan          2.0         22           1
 Y tyrosine            1.8         20           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   StAR-related lipid transfer (START) domain containi... 
STARD8                0.925   StAR-related lipid transfer (START) domain containi...
STARD8                0.925   StAR-related lipid transfer (START) domain containin...
STARD13               0.296   StAR-related lipid transfer (START) domain containin...
STARD13               0.296   StAR-related lipid transfer (START) domain containin...
STARD13               0.296   StAR-related lipid transfer (START) domain containin...
DLC1                  0.282   deleted in liver cancer 1 isoform 1 
DLC1                  0.282   deleted in liver cancer 1 isoform 2 
ARHGAP6               0.029   Rho GTPase activating protein 6 isoform 4 
ARHGAP6               0.029   Rho GTPase activating protein 6 isoform 3 
ARHGAP6               0.029   Rho GTPase activating protein 6 isoform 1 
ARHGAP18              0.025   Rho GTPase activating protein 18 
MYO9B                 0.025   myosin IXB isoform 2 
MYO9B                 0.025   myosin IXB isoform 1 
SH3BP1                0.024   SH3-domain binding protein 1 
ARHGAP4               0.023   Rho GTPase activating protein 4 
FLJ30058              0.023   hypothetical protein LOC158763 
GRLF1                 0.023   glucocorticoid receptor DNA binding factor 1 
ARHGAP28              0.023   Rho GTPase activating protein 28 isoform a 
ARHGAP28              0.023   Rho GTPase activating protein 28 isoform b 
C20orf95              0.022   PREDICTED: chromosome 20 open reading frame 95 [Hom...
C20orf95              0.022   PREDICTED: chromosome 20 open reading frame 95 [Hom...
C20orf95              0.022   PREDICTED: Rho GTPase-activating protein 18-like [H...
MYO9A                 0.022   myosin IXA 
ARHGAP30              0.021   Rho GTPase activating protein 30 isoform 2 
ARHGAP30              0.021   Rho GTPase activating protein 30 isoform 1 
ARHGAP11A             0.020   Rho GTPase activating protein 11A isoform 1 
ARHGAP11A             0.020   Rho GTPase activating protein 11A isoform 2 
BCR                   0.020   breakpoint cluster region isoform 2 
BCR                   0.020   breakpoint cluster region isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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