Guide to the Human Genome
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Name: FLT3LG Sequence: fasta or formatted (235aa) NCBI GI: 38455416
Description:

fms-related tyrosine kinase 3 ligand

Referenced in:

Hematopoiesis and Erythrocytes
Receptor Tyrosine Kinases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         14           3
 C cysteine            3.0          7           1
 D aspartate           3.0          7           1
 E glutamate           5.1         12           2
 F phenylalanine       2.6          6           1
 G glycine             3.4          8           2
 H histidine           1.7          4           1
 I isoleucine          2.1          5           1
 K lysine              2.1          5           1
 L leucine            18.7         44           7
 M methionine          1.3          3           1
 N asparagine          1.7          4           1
 P proline            10.6         25           3
 Q glutamine           7.2         17           1
 R arginine            6.4         15           3
 S serine              8.1         19           2
 T threonine           6.8         16           2
 V valine              6.0         14           1
 W tryptophan          3.0          7           1
 Y tyrosine            1.3          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   fms-related tyrosine kinase 3 ligand 
GABBR2                0.024   G protein-coupled receptor 51 
MMP11                 0.017   matrix metalloproteinase 11 preproprotein 
SF3A1                 0.015   splicing factor 3a, subunit 1, 120kDa isoform 2 [Hom...
SF3A1                 0.015   splicing factor 3a, subunit 1, 120kDa isoform 1 [Homo...
ARTN                  0.015   neurotrophic factor artemin isoform 2 
ARTN                  0.015   neurotrophic factor artemin isoform 1 precursor [Ho...
ARTN                  0.015   neurotrophic factor artemin isoform 3 precursor [Ho...
ARTN                  0.015   neurotrophic factor artemin isoform 1 precursor [Ho...
ARTN                  0.015   neurotrophic factor artemin isoform 3 precursor [Ho...
METRNL                0.015   meteorin, glial cell differentiation regulator-like ...
SYT5                  0.013   synaptotagmin V 
KIAA1949              0.013   phostensin 
KIAA1949              0.013   phostensin 
C20orf151             0.013   hypothetical protein LOC140893 
ATF5                  0.011   activating transcription factor 5 
HS3ST4                0.011   heparan sulfate D-glucosaminyl 3-O-sulfotransferase...
PRSS36                0.011   protease, serine, 36 
TRIM41                0.011   tripartite motif-containing 41 isoform 2 
TRIM41                0.011   tripartite motif-containing 41 isoform 1 
MEF2A                 0.011   myocyte enhancer factor 2A isoform 2 
LOC100286967          0.011   PREDICTED: hypothetical protein XP_002342247 
SEMA3F                0.011   semaphorin 3F 
SLC4A9                0.011   solute carrier family 4, sodium bicarbonate cotrans...
ROBO4                 0.011   roundabout homolog 4, magic roundabout 
MLL4                  0.011   myeloid/lymphoid or mixed-lineage leukemia 4 
KSR2                  0.011   kinase suppressor of ras 2 
C4orf48               0.011   hypothetical protein LOC401115 
ULK1                  0.011   Unc-51-like kinase 1 
SPHK2                 0.011   sphingosine kinase 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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