Guide to the Human Genome
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Name: SLC4A9 Sequence: fasta or formatted (959aa) NCBI GI: 151101449
Description:

solute carrier family 4, sodium bicarbonate cotransporter, member 9

Referenced in:

Kidney
Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.9         76           3
 C cysteine            2.0         19           1
 D aspartate           3.5         34           2
 E glutamate           5.5         53           3
 F phenylalanine       5.1         49           3
 G glycine             7.6         73           2
 H histidine           2.1         20           1
 I isoleucine          3.9         37           2
 K lysine              2.8         27           1
 L leucine            15.8        152           4
 M methionine          2.0         19           1
 N asparagine          1.9         18           1
 P proline             8.4         81           3
 Q glutamine           4.0         38           2
 R arginine            6.0         58           2
 S serine              7.0         67           2
 T threonine           4.6         44           2
 V valine              6.2         59           2
 W tryptophan          1.9         18           3
 Y tyrosine            1.8         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 4, sodium bicarbonate cotrans... 
SLC4A4                0.480   solute carrier family 4, sodium bicarbonate cotranspo...
SLC4A4                0.480   solute carrier family 4, sodium bicarbonate cotrans...
SLC4A4                0.474   solute carrier family 4, sodium bicarbonate cotrans...
SLC4A5                0.433   sodium bicarbonate transporter 4 isoform c 
SLC4A5                0.427   sodium bicarbonate transporter 4 isoform a 
SLC4A8                0.410   solute carrier family 4, sodium bicarbonate cotransp...
SLC4A8                0.410   solute carrier family 4, sodium bicarbonate cotransp...
SLC4A10               0.407   solute carrier family 4, sodium bicarbonate transpo...
SLC4A7                0.377   solute carrier family 4, sodium bicarbonate cotrans...
SLC4A2                0.289   solute carrier family 4, anion exchanger, member 2 ...
SLC4A3                0.278   solute carrier family 4, anion exchanger, member 3 ...
SLC4A3                0.278   solute carrier family 4, anion exchanger, member 3 ...
SLC4A1                0.246   solute carrier family 4, anion exchanger, member 1 [H...
SLC4A11               0.096   solute carrier family 4 member 11 
SRRM2                 0.004   splicing coactivator subunit SRm300 
CHKA                  0.004   choline kinase alpha isoform b 
CHKA                  0.004   choline kinase alpha isoform a 
MOGAT3                0.004   monoacylglycerol O-acyltransferase 3 
CUL9                  0.004   p53-associated parkin-like cytoplasmic protein [Homo...
VANGL1                0.004   vang-like 1 
SF3B2                 0.004   splicing factor 3B subunit 2 
PHRF1                 0.004   PHD and ring finger domains 1 
CHSY3                 0.004   chondroitin sulfate synthase 3 
UVRAG                 0.003   UV radiation resistance associated 
SETD1B                0.003   SET domain containing 1B 
POU6F2                0.003   POU domain, class 6, transcription factor 2 
SH2B3                 0.003   SH2B adaptor protein 3 
LOC100289549          0.003   PREDICTED: hypothetical protein XP_002344492 
SPAG8                 0.003   sperm associated antigen 8 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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