Guide to the Human Genome
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Name: HSD11B1L Sequence: fasta or formatted (199aa) NCBI GI: 38424079
Description:

short-chain dehydrogenase/reductase 10 isoform c

Referenced in:

Alcohol and Aldehyde Dehydrogenases

Other entries for this name:
alt prot [315aa] short-chain dehydrogenase/reductase 10 isoform e
alt prot [205aa] short-chain dehydrogenase/reductase 10 isoform a
alt prot [181aa] short-chain dehydrogenase/reductase 10 isoform f
alt prot [152aa] short-chain dehydrogenase/reductase 10 isoform d
alt prot [286aa] short-chain dehydrogenase/reductase 10 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            14.6         29           4
 C cysteine            1.0          2           1
 D aspartate           3.5          7           1
 E glutamate           2.5          5           1
 F phenylalanine       4.5          9           2
 G glycine             7.5         15           2
 H histidine           0.5          1           1
 I isoleucine          2.0          4           1
 K lysine              2.5          5           1
 L leucine            12.1         24           2
 M methionine          1.5          3           1
 N asparagine          2.0          4           1
 P proline             6.0         12           1
 Q glutamine           3.0          6           1
 R arginine           10.1         20           2
 S serine              7.5         15           2
 T threonine           5.0         10           1
 V valine             10.1         20           3
 W tryptophan          2.0          4           1
 Y tyrosine            2.0          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   short-chain dehydrogenase/reductase 10 isoform c [Ho... 
HSD11B1L              1.000   short-chain dehydrogenase/reductase 10 isoform b [Ho...
HSD11B1L              0.910   short-chain dehydrogenase/reductase 10 isoform a [Ho...
HSD11B1L              0.746   short-chain dehydrogenase/reductase 10 isoform d [Ho...
HSD11B1L              0.656   short-chain dehydrogenase/reductase 10 isoform e [Ho...
HSD11B1L              0.399   short-chain dehydrogenase/reductase 10 isoform f [Ho...
HSD11B1               0.314   11-beta-hydroxysteroid dehydrogenase 1 
HSD11B1               0.314   11-beta-hydroxysteroid dehydrogenase 1 
DHRS7                 0.085   dehydrogenase/reductase (SDR family) member 7 
RDH8                  0.074   retinol dehydrogenase 8 (all-trans) 
DHRS2                 0.071   dehydrogenase/reductase member 2 isoform 2 
DHRS2                 0.071   dehydrogenase/reductase member 2 isoform 1 
DHRS7C                0.071   dehydrogenase/reductase (SDR family) member 7C [Hom...
DHRS7B                0.068   dehydrogenase/reductase (SDR family) member 7B [Homo...
HSD17B14              0.063   dehydrogenase/reductase (SDR family) member 10 [Homo...
BDH1                  0.060   3-hydroxybutyrate dehydrogenase, type 1 precursor [H...
BDH1                  0.060   3-hydroxybutyrate dehydrogenase, type 1 precursor [H...
BDH1                  0.060   3-hydroxybutyrate dehydrogenase, type 1 precursor [H...
KDSR                  0.060   3-ketodihydrosphingosine reductase precursor 
SDR9C7                0.060   short chain dehydrogenase/reductase family 9C, membe...
RDH16                 0.060   retinol dehydrogenase 16 
HSD17B6               0.060   hydroxysteroid (17-beta) dehydrogenase 6 
HSD17B2               0.055   hydroxysteroid (17-beta) dehydrogenase 2 
DHRS9                 0.049   NADP-dependent retinol dehydrogenase/reductase [Homo...
DHRS9                 0.049   NADP-dependent retinol dehydrogenase/reductase [Hom...
DHRS9                 0.049   NADP-dependent retinol dehydrogenase/reductase [Hom...
DHRS9                 0.049   NADP-dependent retinol dehydrogenase/reductase [Homo...
HSD17B11              0.049   estradiol 17-beta-dehydrogenase 11 
HSD17B13              0.049   hydroxysteroid (17-beta) dehydrogenase 13 isoform B...
HSD17B13              0.049   hydroxysteroid (17-beta) dehydrogenase 13 isoform A...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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