Guide to the Human Genome
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Name: BDH1 Sequence: fasta or formatted (343aa) NCBI GI: 17738292
Description:

3-hydroxybutyrate dehydrogenase, type 1 precursor

Referenced in:

Alcohol and Aldehyde Dehydrogenases
Fatty Acid Oxidation and Ketone Bodies

Other entries for this name:
alt mRNA [343aa] 3-hydroxybutyrate dehydrogenase, type 1 precursor
alt mRNA [343aa] 3-hydroxybutyrate dehydrogenase, type 1 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.0         24           2
 C cysteine            2.0          7           1
 D aspartate           4.1         14           1
 E glutamate           6.1         21           2
 F phenylalanine       3.5         12           1
 G glycine             7.3         25           1
 H histidine           1.7          6           1
 I isoleucine          4.7         16           1
 K lysine              6.4         22           2
 L leucine             9.0         31           3
 M methionine          3.8         13           1
 N asparagine          2.6          9           2
 P proline             5.0         17           1
 Q glutamine           1.2          4           1
 R arginine            6.4         22           2
 S serine              9.3         32           2
 T threonine           6.4         22           2
 V valine              7.9         27           2
 W tryptophan          1.5          5           2
 Y tyrosine            4.1         14           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   3-hydroxybutyrate dehydrogenase, type 1 precursor [H... 
BDH1                  1.000   3-hydroxybutyrate dehydrogenase, type 1 precursor [H...
BDH1                  1.000   3-hydroxybutyrate dehydrogenase, type 1 precursor [H...
HSD17B6               0.252   hydroxysteroid (17-beta) dehydrogenase 6 
SDR9C7                0.246   short chain dehydrogenase/reductase family 9C, membe...
DHRS9                 0.245   NADP-dependent retinol dehydrogenase/reductase [Homo...
DHRS9                 0.245   NADP-dependent retinol dehydrogenase/reductase [Hom...
DHRS9                 0.245   NADP-dependent retinol dehydrogenase/reductase [Hom...
DHRS9                 0.245   NADP-dependent retinol dehydrogenase/reductase [Homo...
RDH16                 0.236   retinol dehydrogenase 16 
RDH5                  0.218   retinol dehydrogenase 5 (11-cis and 9-cis) 
HSD17B2               0.215   hydroxysteroid (17-beta) dehydrogenase 2 
HSD11B2               0.206   hydroxysteroid (11-beta) dehydrogenase 2 
RDH8                  0.102   retinol dehydrogenase 8 (all-trans) 
DHRS7B                0.099   dehydrogenase/reductase (SDR family) member 7B [Homo...
HSD17B1               0.093   hydroxysteroid (17-beta) dehydrogenase 1 
HSD17B14              0.086   dehydrogenase/reductase (SDR family) member 10 [Homo...
DHRS7C                0.074   dehydrogenase/reductase (SDR family) member 7C [Hom...
HSD17B12              0.068   hydroxysteroid (17-beta) dehydrogenase 12 
DHRS7                 0.066   dehydrogenase/reductase (SDR family) member 7 
DHRS4                 0.063   peroxisomal short-chain alcohol dehydrogenase 
KDSR                  0.063   3-ketodihydrosphingosine reductase precursor 
SDR16C5               0.051   epidermal retinal dehydrogenase 2 
HSDL1                 0.051   hydroxysteroid dehydrogenase like 1 isoform a [Homo...
DHRS4L2               0.050   dehydrogenase/reductase (SDR family) member 4 like ...
HSD11B1L              0.048   short-chain dehydrogenase/reductase 10 isoform e [Ho...
HSD11B1L              0.048   short-chain dehydrogenase/reductase 10 isoform b [Ho...
HSD11B1               0.047   11-beta-hydroxysteroid dehydrogenase 1 
HSD11B1               0.047   11-beta-hydroxysteroid dehydrogenase 1 
HSD17B8               0.045   estradiol 17 beta-dehydrogenase 8 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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