SDC4 26831

Name: SDC4	Sequence: fasta or formatted (198aa)		NCBI GI: 38201675
Description: syndecan 4 precursor		Referenced in: Protein Glycosylation
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.6 11 2 C cysteine 0.0 0 0 D aspartate 7.6 15 2 E glutamate 10.6 21 2 F phenylalanine 4.5 9 2 G glycine 8.6 17 2 H histidine 1.0 2 1 I isoleucine 6.1 12 1 K lysine 5.6 11 3 L leucine 10.6 21 3 M methionine 2.5 5 1 N asparagine 2.5 5 1 P proline 7.1 14 1 Q glutamine 2.0 4 1 R arginine 3.5 7 1 S serine 8.1 16 2 T threonine 2.5 5 1 V valine 9.1 18 2 W tryptophan 0.0 0 0 Y tyrosine 2.5 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 syndecan 4 precursor SDC2 0.227 syndecan 2 precursor SDC3 0.126 syndecan 3 SDC1 0.112 syndecan 1 precursor SDC1 0.112 syndecan 1 precursor NAP1L4 0.025 nucleosome assembly protein 1-like 4 NRXN3 0.022 neurexin 3 isoform 3 precursor NRXN3 0.022 neurexin 3 isoform 2 precursor NRXN3 0.022 neurexin 3 isoform 1 precursor DCBLD2 0.019 discoidin, CUB and LCCL domain containing 2 PCDH7 0.019 protocadherin 7 isoform b precursor PCDH7 0.019 protocadherin 7 isoform c precursor PCDH7 0.019 protocadherin 7 isoform a precursor NRXN1 0.019 neurexin 1 isoform alpha2 precursor NRXN1 0.019 neurexin 1 isoform beta precursor NRXN1 0.019 neurexin 1 isoform alpha1 precursor NRXN2 0.019 neurexin 2 isoform alpha-1 precursor NRXN2 0.019 neurexin 2 isoform beta precursor NRXN2 0.019 neurexin 2 isoform alpha-2 precursor SYNC 0.014 syncoilin, intermediate filament 1 isoform 2 SYNC 0.014 syncoilin, intermediate filament 1 isoform 1 TJP1 0.014 tight junction protein 1 isoform b TJP1 0.014 tight junction protein 1 isoform a ITGB1 0.014 integrin beta 1 isoform 1A precursor KTN1 0.014 kinectin 1 isoform b KTN1 0.014 kinectin 1 isoform a KTN1 0.014 kinectin 1 isoform c KTN1 0.014 kinectin 1 isoform a ITGB1 0.014 integrin beta 1 isoform 1A precursor LOC100291206 0.014 PREDICTED: hypothetical protein XP_002347014 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.