Guide to the Human Genome
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Name: DCBLD2 Sequence: fasta or formatted (775aa) NCBI GI: 54792129
Description:

discoidin, CUB and LCCL domain containing 2

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1         55           5
 C cysteine            2.1         16           1
 D aspartate           4.4         34           2
 E glutamate           5.2         40           2
 F phenylalanine       3.0         23           1
 G glycine             7.6         59           2
 H histidine           2.1         16           1
 I isoleucine          5.0         39           2
 K lysine              5.2         40           3
 L leucine             8.4         65           5
 M methionine          1.8         14           1
 N asparagine          3.7         29           2
 P proline             8.1         63           4
 Q glutamine           4.8         37           2
 R arginine            4.1         32           2
 S serine              8.0         62           3
 T threonine           7.5         58           2
 V valine              6.5         50           2
 W tryptophan          1.7         13           2
 Y tyrosine            3.9         30           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   discoidin, CUB and LCCL domain containing 2 
DCBLD1                0.204   discoidin, CUB and LCCL domain containing 1 
EDIL3                 0.073   EGF-like repeats and discoidin I-like domains-contai...
NRP1                  0.072   neuropilin 1 isoform c 
NRP1                  0.072   neuropilin 1 isoform b 
NRP1                  0.072   neuropilin 1 isoform a 
F5                    0.071   coagulation factor V precursor 
MFGE8                 0.070   milk fat globule-EGF factor 8 protein isoform a [Ho...
NRP2                  0.066   neuropilin 2 isoform 3 precursor 
NRP2                  0.066   neuropilin 2 isoform 5 precursor 
NRP2                  0.066   neuropilin 2 isoform 1 precursor 
NRP2                  0.066   neuropilin 2 isoform 6 precursor 
NRP2                  0.066   neuropilin 2 isoform 4 precursor 
NRP2                  0.066   neuropilin 2 isoform 2 precursor 
F8                    0.061   coagulation factor VIII isoform b precursor 
F8                    0.061   coagulation factor VIII isoform a precursor 
RS1                   0.049   X-linked juvenile retinoschisis protein precursor [H...
MFGE8                 0.040   milk fat globule-EGF factor 8 protein isoform b [Ho...
AEBP1                 0.039   adipocyte enhancer binding protein 1 precursor [Homo...
CNTNAP2               0.038   cell recognition molecule Caspr2 precursor 
CPXM2                 0.038   carboxypeptidase X (M14 family), member 2 
CDCP2                 0.037   CUB domain containing protein 2 
CNTNAP4               0.035   cell recognition protein CASPR4 isoform 1 
CNTNAP4               0.034   cell recognition protein CASPR4 isoform 2 
TNFAIP6               0.034   tumor necrosis factor, alpha-induced protein 6 precu...
CUBN                  0.034   cubilin 
GPR126                0.033   G protein-coupled receptor 126 alpha 1 precursor [Ho...
GPR126                0.033   G protein-coupled receptor 126 beta 1 precursor [Hom...
GPR126                0.033   G protein-coupled receptor 126 alpha 2 precursor [Ho...
GPR126                0.033   G protein-coupled receptor 126 beta 2 precursor [Hom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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