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Search of human proteins with 38049007
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|38049007 sister-of-mammalian grainyhead protein isoform 1
[Homo sapiens]
(607 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|38049007 sister-of-mammalian grainyhead protein isoform 1 [Ho... 1240 0.0
gi|38049009 sister-of-mammalian grainyhead protein isoform 2 [Ho... 1217 0.0
gi|42789723 sister-of-mammalian grainyhead protein isoform 3 [Ho... 1041 0.0
gi|170784817 transcription factor CP2-like 3 [Homo sapiens] 493 e-139
gi|239735569 grainyhead-like 1 [Homo sapiens] 486 e-137
gi|7657299 LBP-9 [Homo sapiens] 103 4e-22
gi|189491632 upstream binding protein 1 (LBP-1a) isoform b [Homo... 98 3e-20
gi|21361278 transcription factor CP2 [Homo sapiens] 96 7e-20
gi|189491634 upstream binding protein 1 (LBP-1a) isoform a [Homo... 96 7e-20
gi|189491630 upstream binding protein 1 (LBP-1a) isoform a [Homo... 96 7e-20
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 38 0.024
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 38 0.024
gi|242117953 SH3 domain-containing protein C1orf113 isoform 1 [H... 33 0.76
gi|242117948 SH3 domain-containing protein C1orf113 isoform 2 [H... 33 0.76
gi|7705415 hook homolog 1 [Homo sapiens] 33 0.76
gi|5454102 transforming, acidic coiled-coil containing protein 3... 33 0.99
gi|7662228 synaptosomal-associated protein, 91kDa homolog [Homo ... 32 1.3
gi|35493801 ring finger protein 19 [Homo sapiens] 32 1.3
gi|35493782 ring finger protein 19 [Homo sapiens] 32 1.3
gi|50980301 myosin phosphatase-Rho interacting protein isoform 2... 32 1.3
gi|50980307 myosin phosphatase-Rho interacting protein isoform 1... 32 1.3
gi|4506049 hematopoietically expressed homeobox [Homo sapiens] 32 1.7
gi|148922920 DENN/MADD domain containing 4B [Homo sapiens] 32 2.2
gi|116235460 YTH domain family, member 3 [Homo sapiens] 31 2.9
gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens] 31 3.8
gi|45439359 triple functional domain (PTPRF interacting) [Homo s... 31 3.8
gi|40807477 retinoic acid induced 1 [Homo sapiens] 31 3.8
gi|112821681 G protein-regulated inducer of neurite outgrowth 1 ... 31 3.8
gi|225735595 RNA polymerase II associated protein 3 isoform 3 [H... 30 6.4
gi|225735591 RNA polymerase II associated protein 3 isoform 1 [H... 30 6.4
>gi|38049007 sister-of-mammalian grainyhead protein isoform 1 [Homo
sapiens]
Length = 607
Score = 1240 bits (3209), Expect = 0.0
Identities = 607/607 (100%), Positives = 607/607 (100%)
Query: 1 MWMNSILPIFLFRSVRLLKNDPVNLQKFSYTSEDEAWKTYLENPLTAATKAMMRVNGDDD 60
MWMNSILPIFLFRSVRLLKNDPVNLQKFSYTSEDEAWKTYLENPLTAATKAMMRVNGDDD
Sbjct: 1 MWMNSILPIFLFRSVRLLKNDPVNLQKFSYTSEDEAWKTYLENPLTAATKAMMRVNGDDD 60
Query: 61 SVAALSFLYDYYMGPKEKRILSSSTGGRNDQGKRYYHGMEYETDLTPLESPTHLMKFLTE 120
SVAALSFLYDYYMGPKEKRILSSSTGGRNDQGKRYYHGMEYETDLTPLESPTHLMKFLTE
Sbjct: 61 SVAALSFLYDYYMGPKEKRILSSSTGGRNDQGKRYYHGMEYETDLTPLESPTHLMKFLTE 120
Query: 121 NVSGTPEYPDLLKKNNLMSLEGALPTPGKAAPLPAGPSKLEAGSVDSYLLPTTDMYDNGS 180
NVSGTPEYPDLLKKNNLMSLEGALPTPGKAAPLPAGPSKLEAGSVDSYLLPTTDMYDNGS
Sbjct: 121 NVSGTPEYPDLLKKNNLMSLEGALPTPGKAAPLPAGPSKLEAGSVDSYLLPTTDMYDNGS 180
Query: 181 LNSLFESIHGVPPTQRWQPDSTFKDDPQESMLFPDILKTSPEPPCPEDYPSLKSDFEYTL 240
LNSLFESIHGVPPTQRWQPDSTFKDDPQESMLFPDILKTSPEPPCPEDYPSLKSDFEYTL
Sbjct: 181 LNSLFESIHGVPPTQRWQPDSTFKDDPQESMLFPDILKTSPEPPCPEDYPSLKSDFEYTL 240
Query: 241 GSPKAIHIKSGESPMAYLNKGQFYPVTLRTPAGGKGLALSSNKVKSVVMVVFDNEKVPVE 300
GSPKAIHIKSGESPMAYLNKGQFYPVTLRTPAGGKGLALSSNKVKSVVMVVFDNEKVPVE
Sbjct: 241 GSPKAIHIKSGESPMAYLNKGQFYPVTLRTPAGGKGLALSSNKVKSVVMVVFDNEKVPVE 300
Query: 301 QLRFWKHWHSRQPTAKQRVIDVADCKENFNTVEHIEEVAYNALSFVWNVNEEAKVFIGVN 360
QLRFWKHWHSRQPTAKQRVIDVADCKENFNTVEHIEEVAYNALSFVWNVNEEAKVFIGVN
Sbjct: 301 QLRFWKHWHSRQPTAKQRVIDVADCKENFNTVEHIEEVAYNALSFVWNVNEEAKVFIGVN 360
Query: 361 CLSTDFSSQKGVKGVPLNLQIDTYDCGLGTERLVHRAVCQIKIFCDKGAERKMRDDERKQ 420
CLSTDFSSQKGVKGVPLNLQIDTYDCGLGTERLVHRAVCQIKIFCDKGAERKMRDDERKQ
Sbjct: 361 CLSTDFSSQKGVKGVPLNLQIDTYDCGLGTERLVHRAVCQIKIFCDKGAERKMRDDERKQ 420
Query: 421 FRRKVKCPDSSNSGVKGCLLSGFRGNETTYLRPETDLETPPVLFIPNVHFSSLQRSGGAA 480
FRRKVKCPDSSNSGVKGCLLSGFRGNETTYLRPETDLETPPVLFIPNVHFSSLQRSGGAA
Sbjct: 421 FRRKVKCPDSSNSGVKGCLLSGFRGNETTYLRPETDLETPPVLFIPNVHFSSLQRSGGAA 480
Query: 481 PSAGPSSSNRLPLKRTCSPFTEEFEPLPSKQAKEGDLQRVLLYVRRETEEVFDALMLKTP 540
PSAGPSSSNRLPLKRTCSPFTEEFEPLPSKQAKEGDLQRVLLYVRRETEEVFDALMLKTP
Sbjct: 481 PSAGPSSSNRLPLKRTCSPFTEEFEPLPSKQAKEGDLQRVLLYVRRETEEVFDALMLKTP 540
Query: 541 DLKGLRNAISEKYGFPEENIYKVYKKCKRGILVNMDNNIIQHYSNHVAFLLDMGELDGKI 600
DLKGLRNAISEKYGFPEENIYKVYKKCKRGILVNMDNNIIQHYSNHVAFLLDMGELDGKI
Sbjct: 541 DLKGLRNAISEKYGFPEENIYKVYKKCKRGILVNMDNNIIQHYSNHVAFLLDMGELDGKI 600
Query: 601 QIILKEL 607
QIILKEL
Sbjct: 601 QIILKEL 607
>gi|38049009 sister-of-mammalian grainyhead protein isoform 2 [Homo
sapiens]
Length = 602
Score = 1217 bits (3149), Expect = 0.0
Identities = 596/596 (100%), Positives = 596/596 (100%)
Query: 12 FRSVRLLKNDPVNLQKFSYTSEDEAWKTYLENPLTAATKAMMRVNGDDDSVAALSFLYDY 71
FRSVRLLKNDPVNLQKFSYTSEDEAWKTYLENPLTAATKAMMRVNGDDDSVAALSFLYDY
Sbjct: 7 FRSVRLLKNDPVNLQKFSYTSEDEAWKTYLENPLTAATKAMMRVNGDDDSVAALSFLYDY 66
Query: 72 YMGPKEKRILSSSTGGRNDQGKRYYHGMEYETDLTPLESPTHLMKFLTENVSGTPEYPDL 131
YMGPKEKRILSSSTGGRNDQGKRYYHGMEYETDLTPLESPTHLMKFLTENVSGTPEYPDL
Sbjct: 67 YMGPKEKRILSSSTGGRNDQGKRYYHGMEYETDLTPLESPTHLMKFLTENVSGTPEYPDL 126
Query: 132 LKKNNLMSLEGALPTPGKAAPLPAGPSKLEAGSVDSYLLPTTDMYDNGSLNSLFESIHGV 191
LKKNNLMSLEGALPTPGKAAPLPAGPSKLEAGSVDSYLLPTTDMYDNGSLNSLFESIHGV
Sbjct: 127 LKKNNLMSLEGALPTPGKAAPLPAGPSKLEAGSVDSYLLPTTDMYDNGSLNSLFESIHGV 186
Query: 192 PPTQRWQPDSTFKDDPQESMLFPDILKTSPEPPCPEDYPSLKSDFEYTLGSPKAIHIKSG 251
PPTQRWQPDSTFKDDPQESMLFPDILKTSPEPPCPEDYPSLKSDFEYTLGSPKAIHIKSG
Sbjct: 187 PPTQRWQPDSTFKDDPQESMLFPDILKTSPEPPCPEDYPSLKSDFEYTLGSPKAIHIKSG 246
Query: 252 ESPMAYLNKGQFYPVTLRTPAGGKGLALSSNKVKSVVMVVFDNEKVPVEQLRFWKHWHSR 311
ESPMAYLNKGQFYPVTLRTPAGGKGLALSSNKVKSVVMVVFDNEKVPVEQLRFWKHWHSR
Sbjct: 247 ESPMAYLNKGQFYPVTLRTPAGGKGLALSSNKVKSVVMVVFDNEKVPVEQLRFWKHWHSR 306
Query: 312 QPTAKQRVIDVADCKENFNTVEHIEEVAYNALSFVWNVNEEAKVFIGVNCLSTDFSSQKG 371
QPTAKQRVIDVADCKENFNTVEHIEEVAYNALSFVWNVNEEAKVFIGVNCLSTDFSSQKG
Sbjct: 307 QPTAKQRVIDVADCKENFNTVEHIEEVAYNALSFVWNVNEEAKVFIGVNCLSTDFSSQKG 366
Query: 372 VKGVPLNLQIDTYDCGLGTERLVHRAVCQIKIFCDKGAERKMRDDERKQFRRKVKCPDSS 431
VKGVPLNLQIDTYDCGLGTERLVHRAVCQIKIFCDKGAERKMRDDERKQFRRKVKCPDSS
Sbjct: 367 VKGVPLNLQIDTYDCGLGTERLVHRAVCQIKIFCDKGAERKMRDDERKQFRRKVKCPDSS 426
Query: 432 NSGVKGCLLSGFRGNETTYLRPETDLETPPVLFIPNVHFSSLQRSGGAAPSAGPSSSNRL 491
NSGVKGCLLSGFRGNETTYLRPETDLETPPVLFIPNVHFSSLQRSGGAAPSAGPSSSNRL
Sbjct: 427 NSGVKGCLLSGFRGNETTYLRPETDLETPPVLFIPNVHFSSLQRSGGAAPSAGPSSSNRL 486
Query: 492 PLKRTCSPFTEEFEPLPSKQAKEGDLQRVLLYVRRETEEVFDALMLKTPDLKGLRNAISE 551
PLKRTCSPFTEEFEPLPSKQAKEGDLQRVLLYVRRETEEVFDALMLKTPDLKGLRNAISE
Sbjct: 487 PLKRTCSPFTEEFEPLPSKQAKEGDLQRVLLYVRRETEEVFDALMLKTPDLKGLRNAISE 546
Query: 552 KYGFPEENIYKVYKKCKRGILVNMDNNIIQHYSNHVAFLLDMGELDGKIQIILKEL 607
KYGFPEENIYKVYKKCKRGILVNMDNNIIQHYSNHVAFLLDMGELDGKIQIILKEL
Sbjct: 547 KYGFPEENIYKVYKKCKRGILVNMDNNIIQHYSNHVAFLLDMGELDGKIQIILKEL 602
>gi|42789723 sister-of-mammalian grainyhead protein isoform 3 [Homo
sapiens]
Length = 509
Score = 1041 bits (2691), Expect = 0.0
Identities = 509/509 (100%), Positives = 509/509 (100%)
Query: 99 MEYETDLTPLESPTHLMKFLTENVSGTPEYPDLLKKNNLMSLEGALPTPGKAAPLPAGPS 158
MEYETDLTPLESPTHLMKFLTENVSGTPEYPDLLKKNNLMSLEGALPTPGKAAPLPAGPS
Sbjct: 1 MEYETDLTPLESPTHLMKFLTENVSGTPEYPDLLKKNNLMSLEGALPTPGKAAPLPAGPS 60
Query: 159 KLEAGSVDSYLLPTTDMYDNGSLNSLFESIHGVPPTQRWQPDSTFKDDPQESMLFPDILK 218
KLEAGSVDSYLLPTTDMYDNGSLNSLFESIHGVPPTQRWQPDSTFKDDPQESMLFPDILK
Sbjct: 61 KLEAGSVDSYLLPTTDMYDNGSLNSLFESIHGVPPTQRWQPDSTFKDDPQESMLFPDILK 120
Query: 219 TSPEPPCPEDYPSLKSDFEYTLGSPKAIHIKSGESPMAYLNKGQFYPVTLRTPAGGKGLA 278
TSPEPPCPEDYPSLKSDFEYTLGSPKAIHIKSGESPMAYLNKGQFYPVTLRTPAGGKGLA
Sbjct: 121 TSPEPPCPEDYPSLKSDFEYTLGSPKAIHIKSGESPMAYLNKGQFYPVTLRTPAGGKGLA 180
Query: 279 LSSNKVKSVVMVVFDNEKVPVEQLRFWKHWHSRQPTAKQRVIDVADCKENFNTVEHIEEV 338
LSSNKVKSVVMVVFDNEKVPVEQLRFWKHWHSRQPTAKQRVIDVADCKENFNTVEHIEEV
Sbjct: 181 LSSNKVKSVVMVVFDNEKVPVEQLRFWKHWHSRQPTAKQRVIDVADCKENFNTVEHIEEV 240
Query: 339 AYNALSFVWNVNEEAKVFIGVNCLSTDFSSQKGVKGVPLNLQIDTYDCGLGTERLVHRAV 398
AYNALSFVWNVNEEAKVFIGVNCLSTDFSSQKGVKGVPLNLQIDTYDCGLGTERLVHRAV
Sbjct: 241 AYNALSFVWNVNEEAKVFIGVNCLSTDFSSQKGVKGVPLNLQIDTYDCGLGTERLVHRAV 300
Query: 399 CQIKIFCDKGAERKMRDDERKQFRRKVKCPDSSNSGVKGCLLSGFRGNETTYLRPETDLE 458
CQIKIFCDKGAERKMRDDERKQFRRKVKCPDSSNSGVKGCLLSGFRGNETTYLRPETDLE
Sbjct: 301 CQIKIFCDKGAERKMRDDERKQFRRKVKCPDSSNSGVKGCLLSGFRGNETTYLRPETDLE 360
Query: 459 TPPVLFIPNVHFSSLQRSGGAAPSAGPSSSNRLPLKRTCSPFTEEFEPLPSKQAKEGDLQ 518
TPPVLFIPNVHFSSLQRSGGAAPSAGPSSSNRLPLKRTCSPFTEEFEPLPSKQAKEGDLQ
Sbjct: 361 TPPVLFIPNVHFSSLQRSGGAAPSAGPSSSNRLPLKRTCSPFTEEFEPLPSKQAKEGDLQ 420
Query: 519 RVLLYVRRETEEVFDALMLKTPDLKGLRNAISEKYGFPEENIYKVYKKCKRGILVNMDNN 578
RVLLYVRRETEEVFDALMLKTPDLKGLRNAISEKYGFPEENIYKVYKKCKRGILVNMDNN
Sbjct: 421 RVLLYVRRETEEVFDALMLKTPDLKGLRNAISEKYGFPEENIYKVYKKCKRGILVNMDNN 480
Query: 579 IIQHYSNHVAFLLDMGELDGKIQIILKEL 607
IIQHYSNHVAFLLDMGELDGKIQIILKEL
Sbjct: 481 IIQHYSNHVAFLLDMGELDGKIQIILKEL 509
>gi|170784817 transcription factor CP2-like 3 [Homo sapiens]
Length = 625
Score = 493 bits (1269), Expect = e-139
Identities = 285/620 (45%), Positives = 388/620 (62%), Gaps = 41/620 (6%)
Query: 18 LKNDPVNLQKFSYTSEDEAWKTYLENPLTAATKAMMRVNGDDDSVAALSFLYDYYMGPKE 77
+ +DP + +YTSEDEAWK+YLENPLTAATKAMM +NGD+DS AAL LYDYY P++
Sbjct: 17 MPSDPPFNTRRAYTSEDEAWKSYLENPLTAATKAMMSINGDEDSAAALGLLYDYYKVPRD 76
Query: 78 KRILSSS--TGGRNDQGKRYYHGM-EYETDLTPLESPTHLMKFLTENVSGTPEYPDLLKK 134
KR+LS S + + DQ KR G E +++L+ E+ ++K + N+S ++ + K+
Sbjct: 77 KRLLSVSKASDSQEDQEKRNCLGTSEAQSNLSGGENRVQVLKTVPVNLSLNQDHLENSKR 136
Query: 135 NNLMSLEGALPTPGKAAPLP-AGPSKLEAGSVDSYLLPTTDMYDNGSLNS----LFESIH 189
++ P +A +P +G + ++A + Y G +FE
Sbjct: 137 EQY-----SISFPESSAIIPVSGITVVKAEDFTPVFMAPPVHYPRGDGEEQRVVIFEQTQ 191
Query: 190 GVPPT-----------QRWQPDSTFKDDPQESMLFPDILKTSPEPPCPEDY---PSLKSD 235
P+ QR PDST+ + +++ K E+Y +
Sbjct: 192 YDVPSLATHSAYLKDDQRSTPDSTYSESFKDAATE----KFRSASVGAEEYMYDQTSSGT 247
Query: 236 FEYTLGSPKAIHIKSGESPMAYLNKGQFYPVTLRTPAGGKGLALSSNKVKSVVMVVFDNE 295
F+YTL + K++ K GE PM YLNKGQFY +TL K +KV+SVVMVVF +
Sbjct: 248 FQYTLEATKSLRQKQGEGPMTYLNKGQFYAITLSETGDNKCFRHPISKVRSVVMVVFSED 307
Query: 296 KVPVEQLRFWKHWHSRQPTAKQRVIDVADCKENFNTVEHIEEVAYNALSFVWNVNEEAKV 355
K EQL++WK+WHSRQ TAKQRV+D+AD KE+FNT+ +IEE+AYNA+SF W+VNEEAK+
Sbjct: 308 KNRDEQLKYWKYWHSRQHTAKQRVLDIADYKESFNTIGNIEEIAYNAVSFTWDVNEEAKI 367
Query: 356 FIGVNCLSTDFSSQKGVKGVPLNLQIDTYDCGLGTERLVHRAVCQIKIFCDKGAERKMRD 415
FI VNCLSTDFSSQKGVKG+PL +QIDTY + + +HRA CQIK+FCDKGAERK+RD
Sbjct: 368 FITVNCLSTDFSSQKGVKGLPLMIQIDTYSYNNRSNKPIHRAYCQIKVFCDKGAERKIRD 427
Query: 416 DERKQFRRKVK-------CPDSSNSGVKGCLLSGFRGNETTYLRPETDLETPPVLFIPNV 468
+ERKQ R+K K C SS+ + L + ++ TY + DL + PVLFIP+V
Sbjct: 428 EERKQNRKKGKGQASQTQCNSSSDGKLAAIPLQ--KKSDITYFKTMPDLHSQPVLFIPDV 485
Query: 469 HFSSLQRSGGAAPSAGPS-SSNRLPLKRTCSPFTEEFEPLPSKQAKEGDLQRVLLYVRRE 527
HF++LQR+G + + +KR P EEF P+PSKQ KE +RVLLYVR+E
Sbjct: 486 HFANLQRTGQVYYNTDDEREGGSVLVKRMFRPMEEEFGPVPSKQMKEEGTKRVLLYVRKE 545
Query: 528 TEEVFDALMLKTPDLKGLRNAISEKYGFPEENIYKVYKKCKRGILVNMDNNIIQHYSNHV 587
T++VFDALMLK+P +KGL AISEKYG P E I K+YKK K+GILVNMD+NII+HYSN
Sbjct: 546 TDDVFDALMLKSPTVKGLMEAISEKYGLPVEKIAKLYKKSKKGILVNMDDNIIEHYSNED 605
Query: 588 AFLLDMGELDGKIQIILKEL 607
F+L+M + ++ L E+
Sbjct: 606 TFILNMESMVEGFKVTLMEI 625
>gi|239735569 grainyhead-like 1 [Homo sapiens]
Length = 618
Score = 486 bits (1252), Expect = e-137
Identities = 289/625 (46%), Positives = 381/625 (60%), Gaps = 45/625 (7%)
Query: 13 RSVRLLKNDPVNLQKFSYTSEDEAWKTYLENPLTAATKAMMRVNGDDDSVAALSFLYDYY 72
R V +L+N+ + Q+ SYTSEDEAWK++LENPLTAATKAMM +NGD+DS AAL LYDYY
Sbjct: 9 RPVLVLQNEALYPQRRSYTSEDEAWKSFLENPLTAATKAMMSINGDEDSAAALGLLYDYY 68
Query: 73 MGPKEKRILSSSTGGRN---DQGKRYYHGMEYETDLTPL-ESPTHLMKFLTENVSGTPEY 128
P+E+R ++ + D KR + E L E+ ++K + N+
Sbjct: 69 KVPRERRSSTAKPEVEHPEPDHSKRNSIPIVTEQPLISAGENRVQVLKNVPFNI------ 122
Query: 129 PDLLKKNNLMSLE--GALPTPGKA-----APLPAGPSKLEA-------GSVDSYLLPTTD 174
+L N + ++ G L P A +P K E G + P
Sbjct: 123 --VLPHGNQLGIDKRGHLTAPDTTVTVSIATMPTHSIKTETQPHGFAVGIPPAVYHPEPT 180
Query: 175 ----MYDNGSLNSLFESIHGVPPTQRWQPDSTFKDDPQESM---LFPDILKTSPEPPCPE 227
++D F S P QR PDSTF + +E + FP L E
Sbjct: 181 ERVVVFDRNLNTDQFSSGAQAPNAQRRTPDSTFSETFKEGVQEVFFPSDLSLRMPGMNSE 240
Query: 228 DY---PSLKSDFEYTLGSPKAIHIKSGESPMAYLNKGQFYPVTLRTPAGGKGLALSSNKV 284
DY ++FEYTL + K++ K G+S M YLNKGQFYP+TL+ + +G+ +KV
Sbjct: 241 DYVFDSVSGNNFEYTLEASKSLRQKPGDSTMTYLNKGQFYPITLKEVSSSEGIHHPISKV 300
Query: 285 KSVVMVVFDNEKVPVEQLRFWKHWHSRQPTAKQRVIDVADCKENFNTVEHIEEVAYNALS 344
+SV+MVVF +K +QLR WK+WHSRQ TAKQR ID+AD KE+FNT+ +IEE+AYNA+S
Sbjct: 301 RSVIMVVFAEDKSREDQLRHWKYWHSRQHTAKQRCIDIADYKESFNTISNIEEIAYNAIS 360
Query: 345 FVWNVNEEAKVFIGVNCLSTDFSSQKGVKGVPLNLQIDTYDCGLGTERLVHRAVCQIKIF 404
F W++N+EAKVFI VNCLSTDFSSQKGVKG+PLN+Q+DTY + + VHRA CQIK+F
Sbjct: 361 FTWDINDEAKVFISVNCLSTDFSSQKGVKGLPLNIQVDTYSYNNRSNKPVHRAYCQIKVF 420
Query: 405 CDKGAERKMRDDERKQFRRKVKCPDSSNSGVKGCLLSGFRGNETTYLRPETDLETPPVLF 464
CDKGAERK+RD+ERKQ +RKV S VK LL + + T +P DL+T PVLF
Sbjct: 421 CDKGAERKIRDEERKQSKRKV-------SDVKVPLLPSHKRMDITVFKPFIDLDTQPVLF 473
Query: 465 IPNVHFSSLQRSGGAAPSAGPS-SSNRLPLKRTCSPFTEEFEPLPS-KQAKEGDLQRVLL 522
IP+VHF++LQR P A LKR ++F PS K A+ + +RVLL
Sbjct: 474 IPDVHFANLQRGTHVLPIASEELEGEGSVLKRGPYGTEDDFAVPPSTKLARIEEPKRVLL 533
Query: 523 YVRRETEEVFDALMLKTPDLKGLRNAISEKYGFPEENIYKVYKKCKRGILVNMDNNIIQH 582
YVR+E+EEVFDALMLKTP LKGL AIS+KY P + I K++KKCK+GILVNMD+NI++H
Sbjct: 534 YVRKESEEVFDALMLKTPSLKGLMEAISDKYDVPHDKIGKIFKKCKKGILVNMDDNIVKH 593
Query: 583 YSNHVAFLLDMGELDGKIQIILKEL 607
YSN F L + E G ++ L E+
Sbjct: 594 YSNEDTFQLQIEEAGGSYKLTLTEI 618
>gi|7657299 LBP-9 [Homo sapiens]
Length = 479
Score = 103 bits (258), Expect = 4e-22
Identities = 108/448 (24%), Positives = 189/448 (42%), Gaps = 68/448 (15%)
Query: 222 EPPCPEDYPSLKSDFEYTLGSPKAIHIKSGESPMAYLNKGQFYPVTL-RTPAGGKGLALS 280
EP + + +Y L + + +K E + YLN+GQ Y + L G L+
Sbjct: 33 EPQLSPENEARLPPLQYVLCAATSPAVKLHEETLTYLNQGQSYEIRLLENRKLGDFQDLN 92
Query: 281 SNKVKSVVMVVFDNEKVPVEQLRFWKHWHSRQPTAKQRVIDVADCKENFNTVE-HIEEVA 339
+ VKS++ VVF + ++ + + + W +P R++D+ D + ++
Sbjct: 93 TKYVKSIIRVVFHDRRLQYTEHQQLEGWRWSRPG--DRILDI-DIPLSVGILDPRASPTQ 149
Query: 340 YNALSFVWNVNEEAKVFIGVNCLSTDFSSQK--GVKGVPLNLQIDTY---DCGLGTERLV 394
NA+ F+W+ + A FI V+C+ST+F+ +K G KGVP +QIDT+ + G TE L
Sbjct: 150 LNAVEFLWDPAKRASAFIQVHCISTEFTPRKHGGEKGVPFRVQIDTFKQNENGEYTEHL- 208
Query: 395 HRAVCQIKIFCDKGAERKMRDDERKQFRRKVKCPDSSNSGVKGCLLS------------- 441
H A CQIK+F KGA+RK + D K +R + + + +L+
Sbjct: 209 HSASCQIKVFKPKGADRKQKTDREKMEKRTAQEKEKYQPSYETTILTECSPWPDVAYQVN 268
Query: 442 -----GFRGNETTY------LRPETDLETPPV---------------LFIPNVHFSSLQR 475
+ G+ ++ P +E PV ++ FS R
Sbjct: 269 SAPSPSYNGSPNSFGLGEGNASPTHPVEALPVGSDHLLPSASIQDAQQWLHRNRFSQFCR 328
Query: 476 SGGAAPSAGPSSSNRLPLKRTCSPF--TEEFEPLPSKQAK---------EGDLQRVLLYV 524
+ A +R L + C P F + + + E + RV L
Sbjct: 329 LFASFSGADLLKMSRDDLVQICGPADGIRLFNAIKGRNVRPKMTIYVCQELEQNRVPLQQ 388
Query: 525 RRETE-----EVFDALMLKTPDLKGLRNAISEKYGFPEENIYKVYKKCKRGILVNMDNNI 579
+R+ V+ A+ L+ L I+ Y ++I++VY++ GI V + N +
Sbjct: 389 KRDGSGDSNLSVYHAIFLEELTTLELIEKIANLYSISPQHIHRVYRQGPTGIHVVVSNEM 448
Query: 580 IQHYSNHVAFLLD--MGELDGKIQIILK 605
+Q++ + F+L E + IILK
Sbjct: 449 VQNFQDESCFVLSTIKAESNDGYHIILK 476
>gi|189491632 upstream binding protein 1 (LBP-1a) isoform b [Homo
sapiens]
Length = 504
Score = 97.8 bits (242), Expect = 3e-20
Identities = 107/454 (23%), Positives = 185/454 (40%), Gaps = 77/454 (16%)
Query: 226 PEDYPSLKSDFEYTLGSPKAIHIKSGESPMAYLNKGQFYPVT-LRTPAGGKGLALSSNKV 284
P D + F+Y + + + +K + + YLN+GQ Y + L G ++ V
Sbjct: 54 PLDGETEHPPFQYVMCAATSPAVKLHDETLTYLNQGQSYEIRMLDNRKMGDMPEINGKLV 113
Query: 285 KSVVMVVFDNEKVPVEQLRFWKHWHSRQPTAKQRVIDVADCKENFNTVEHIEEVAYNALS 344
KS++ VVF + ++ + + + W +P + +D+ +T + ++ NA+
Sbjct: 114 KSIIRVVFHDRRLQYTEHQQLEGWKWNRPGDRLLDLDIPMSVGIIDTRTNPSQL--NAVE 171
Query: 345 FVWNVNEEAKVFIGVNCLSTDFSSQK--GVKGVPLNLQIDTY---DCGLGTERLVHRAVC 399
F+W+ + FI V+C+ST+F+ +K G KGVP +Q+DT+ + G T+ L H A C
Sbjct: 172 FLWDPAKRTSAFIQVHCISTEFTPRKHGGEKGVPFRIQVDTFKQNENGEYTDHL-HSASC 230
Query: 400 QIKIFCDKGAERKMRDDERKQFRRKVKCPDSSNSGVKGCLL---SGFRGNETTYLR---- 452
QIK+F KGA+RK + D K +R + +L S + T Y+
Sbjct: 231 QIKVFKPKGADRKQKTDREKMEKRTAHEKEKYQPSYDTTILTECSPWPDAPTAYVNNSPS 290
Query: 453 PETDLETP--PVLFIPNVHFSSLQRSGGAA---------PSAGPSSSNRLPLKRTCSPFT 501
P +P +P+ + SS G A PSA + + LK S +T
Sbjct: 291 PAPTFTSPQQSTCSVPDSNSSSPNHQGDGASQTSGEQIQPSATIQETQQWLLKNRFSSYT 350
Query: 502 EEFEPLPS----KQAKEGDLQ---------------------RVLLYVRRETEE------ 530
F K KE +Q R+ +YV RE
Sbjct: 351 RLFSNFSGADLLKLTKEDLVQICGAADGIRLYNSLKSRSVRPRLTIYVCREQPSSTVLQG 410
Query: 531 -----------------VFDALMLKTPDLKGLRNAISEKYGFPEENIYKVYKKCKRGILV 573
V+ A+ L+ + ++ + P I +VY++ GI +
Sbjct: 411 QQQAASSASENGSGAPYVYHAIYLEEMIASEVARKLALVFNIPLHQINQVYRQGPTGIHI 470
Query: 574 NMDNNIIQHYSNHVAFLLD--MGELDGKIQIILK 605
+ + ++Q++ + FL E I IILK
Sbjct: 471 LVSDQMVQNFQDESCFLFSTVKAESSDGIHIILK 504
>gi|21361278 transcription factor CP2 [Homo sapiens]
Length = 502
Score = 96.3 bits (238), Expect = 7e-20
Identities = 66/209 (31%), Positives = 108/209 (51%), Gaps = 11/209 (5%)
Query: 222 EPPCPEDYPSLKSDFEYTLGSPKAIHIKSGESPMAYLNKGQFYPVT-LRTPAGGKGLALS 280
E P D + F+Y L + + +K + + YLN+GQ Y + L G+ ++
Sbjct: 53 ESSLPPDNENKILPFQYVLCAATSPAVKLHDETLTYLNQGQSYEIRMLDNRKLGELPEIN 112
Query: 281 SNKVKSVVMVVFDNEKVPVEQLRFWKHWHSRQPTAKQRVIDVADCKENFNTVE-HIEEVA 339
VKS+ VVF + ++ + + + W +P R++D+ D + ++
Sbjct: 113 GKLVKSIFRVVFHDRRLQYTEHQQLEGWRWNRPG--DRILDI-DIPMSVGIIDPRANPTQ 169
Query: 340 YNALSFVWNVNEEAKVFIGVNCLSTDFSSQK--GVKGVPLNLQIDTY---DCGLGTERLV 394
N + F+W+ + VFI V+C+ST+F+ +K G KGVP +QIDT+ + G TE L
Sbjct: 170 LNTVEFLWDPAKRTSVFIQVHCISTEFTMRKHGGEKGVPFRVQIDTFKENENGEYTEHL- 228
Query: 395 HRAVCQIKIFCDKGAERKMRDDERKQFRR 423
H A CQIK+F KGA+RK + D K +R
Sbjct: 229 HSASCQIKVFKPKGADRKQKTDREKMEKR 257
>gi|189491634 upstream binding protein 1 (LBP-1a) isoform a [Homo
sapiens]
Length = 540
Score = 96.3 bits (238), Expect = 7e-20
Identities = 75/290 (25%), Positives = 133/290 (45%), Gaps = 20/290 (6%)
Query: 226 PEDYPSLKSDFEYTLGSPKAIHIKSGESPMAYLNKGQFYPVT-LRTPAGGKGLALSSNKV 284
P D + F+Y + + + +K + + YLN+GQ Y + L G ++ V
Sbjct: 54 PLDGETEHPPFQYVMCAATSPAVKLHDETLTYLNQGQSYEIRMLDNRKMGDMPEINGKLV 113
Query: 285 KSVVMVVFDNEKVPVEQLRFWKHWHSRQPTAKQRVIDVADCKENFNTVEHIEEVAYNALS 344
KS++ VVF + ++ + + + W +P + +D+ +T + ++ NA+
Sbjct: 114 KSIIRVVFHDRRLQYTEHQQLEGWKWNRPGDRLLDLDIPMSVGIIDTRTNPSQL--NAVE 171
Query: 345 FVWNVNEEAKVFIGVNCLSTDFSSQK--GVKGVPLNLQIDTY---DCGLGTERLVHRAVC 399
F+W+ + FI V+C+ST+F+ +K G KGVP +Q+DT+ + G T+ L H A C
Sbjct: 172 FLWDPAKRTSAFIQVHCISTEFTPRKHGGEKGVPFRIQVDTFKQNENGEYTDHL-HSASC 230
Query: 400 QIKIFCDKGAERKMRDDERKQFRRKVKCPDSSNSGVKGCLLSGFRGNETTYLRPETDLET 459
QIK+F KGA+RK + D K +R + +L+ R E + +
Sbjct: 231 QIKVFKPKGADRKQKTDREKMEKRTAHEKEKYQPSYDTTILTEMRLEPIIEDAVEHEQKK 290
Query: 460 PPVLFIPNVHFSSLQRSGGAAP-----------SAGPSSSNRLPLKRTCS 498
+P + SL + G +P S P+ + P + TCS
Sbjct: 291 SSKRTLPADYGDSLAKRGSCSPWPDAPTAYVNNSPSPAPTFTSPQQSTCS 340
>gi|189491630 upstream binding protein 1 (LBP-1a) isoform a [Homo
sapiens]
Length = 540
Score = 96.3 bits (238), Expect = 7e-20
Identities = 75/290 (25%), Positives = 133/290 (45%), Gaps = 20/290 (6%)
Query: 226 PEDYPSLKSDFEYTLGSPKAIHIKSGESPMAYLNKGQFYPVT-LRTPAGGKGLALSSNKV 284
P D + F+Y + + + +K + + YLN+GQ Y + L G ++ V
Sbjct: 54 PLDGETEHPPFQYVMCAATSPAVKLHDETLTYLNQGQSYEIRMLDNRKMGDMPEINGKLV 113
Query: 285 KSVVMVVFDNEKVPVEQLRFWKHWHSRQPTAKQRVIDVADCKENFNTVEHIEEVAYNALS 344
KS++ VVF + ++ + + + W +P + +D+ +T + ++ NA+
Sbjct: 114 KSIIRVVFHDRRLQYTEHQQLEGWKWNRPGDRLLDLDIPMSVGIIDTRTNPSQL--NAVE 171
Query: 345 FVWNVNEEAKVFIGVNCLSTDFSSQK--GVKGVPLNLQIDTY---DCGLGTERLVHRAVC 399
F+W+ + FI V+C+ST+F+ +K G KGVP +Q+DT+ + G T+ L H A C
Sbjct: 172 FLWDPAKRTSAFIQVHCISTEFTPRKHGGEKGVPFRIQVDTFKQNENGEYTDHL-HSASC 230
Query: 400 QIKIFCDKGAERKMRDDERKQFRRKVKCPDSSNSGVKGCLLSGFRGNETTYLRPETDLET 459
QIK+F KGA+RK + D K +R + +L+ R E + +
Sbjct: 231 QIKVFKPKGADRKQKTDREKMEKRTAHEKEKYQPSYDTTILTEMRLEPIIEDAVEHEQKK 290
Query: 460 PPVLFIPNVHFSSLQRSGGAAP-----------SAGPSSSNRLPLKRTCS 498
+P + SL + G +P S P+ + P + TCS
Sbjct: 291 SSKRTLPADYGDSLAKRGSCSPWPDAPTAYVNNSPSPAPTFTSPQQSTCS 340
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 38.1 bits (87), Expect = 0.024
Identities = 36/121 (29%), Positives = 51/121 (42%), Gaps = 24/121 (19%)
Query: 118 LTENVSGTPEYPDLLKKN-NLMSLEGALPTPGKAAPLPAGPSKLEAGSV------DSYLL 170
L + SG E P L ++N +L S LP+PG++ PLP PS+ V L
Sbjct: 321 LPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVRDPPGRSGPLP 380
Query: 171 PTTDMYDNGSLNSLFESIHGVPPTQRWQPDSTFKDDPQESMLFPDILKTSPEPPCPEDYP 230
P + NGS + +P T + P + D P ++ P PP P D P
Sbjct: 381 PPPPVSRNGSTS------RALPATPQ-LPSRSGVDSP----------RSGPRPPLPPDRP 423
Query: 231 S 231
S
Sbjct: 424 S 424
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 38.1 bits (87), Expect = 0.024
Identities = 36/121 (29%), Positives = 51/121 (42%), Gaps = 24/121 (19%)
Query: 118 LTENVSGTPEYPDLLKKN-NLMSLEGALPTPGKAAPLPAGPSKLEAGSV------DSYLL 170
L + SG E P L ++N +L S LP+PG++ PLP PS+ V L
Sbjct: 321 LPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVRDPPGRSGPLP 380
Query: 171 PTTDMYDNGSLNSLFESIHGVPPTQRWQPDSTFKDDPQESMLFPDILKTSPEPPCPEDYP 230
P + NGS + +P T + P + D P ++ P PP P D P
Sbjct: 381 PPPPVSRNGSTS------RALPATPQ-LPSRSGVDSP----------RSGPRPPLPPDRP 423
Query: 231 S 231
S
Sbjct: 424 S 424
>gi|242117953 SH3 domain-containing protein C1orf113 isoform 1 [Homo
sapiens]
Length = 756
Score = 33.1 bits (74), Expect = 0.76
Identities = 37/138 (26%), Positives = 50/138 (36%), Gaps = 17/138 (12%)
Query: 111 PTHLMKFLTENVSGTPEYPDLLKKNNLMSLEGALPTPGKAAPLPAGPSKLEAG---SVDS 167
P + K + V P +K+ + + +LPT K A GPSK + S DS
Sbjct: 240 PPPIKKLVPRKVVSRESAP--IKEPKKLMPKTSLPTVKKLATATTGPSKAKTSRTPSRDS 297
Query: 168 YLLPTTDMYDNGSLNS--LFESIHGVPPTQRWQPDSTFKDDPQESML----------FPD 215
L + D NG S + TQ Q S + + S PD
Sbjct: 298 QKLTSRDSGPNGGFQSGGSYHPGRKRSKTQTPQQRSVSSQEEEHSSPVKAPSVKRTPMPD 357
Query: 216 ILKTSPEPPCPEDYPSLK 233
T PP PE+ PS K
Sbjct: 358 KTATPERPPAPENAPSSK 375
>gi|242117948 SH3 domain-containing protein C1orf113 isoform 2 [Homo
sapiens]
Length = 645
Score = 33.1 bits (74), Expect = 0.76
Identities = 37/138 (26%), Positives = 50/138 (36%), Gaps = 17/138 (12%)
Query: 111 PTHLMKFLTENVSGTPEYPDLLKKNNLMSLEGALPTPGKAAPLPAGPSKLEAG---SVDS 167
P + K + V P +K+ + + +LPT K A GPSK + S DS
Sbjct: 129 PPPIKKLVPRKVVSRESAP--IKEPKKLMPKTSLPTVKKLATATTGPSKAKTSRTPSRDS 186
Query: 168 YLLPTTDMYDNGSLNS--LFESIHGVPPTQRWQPDSTFKDDPQESML----------FPD 215
L + D NG S + TQ Q S + + S PD
Sbjct: 187 QKLTSRDSGPNGGFQSGGSYHPGRKRSKTQTPQQRSVSSQEEEHSSPVKAPSVKRTPMPD 246
Query: 216 ILKTSPEPPCPEDYPSLK 233
T PP PE+ PS K
Sbjct: 247 KTATPERPPAPENAPSSK 264
>gi|7705415 hook homolog 1 [Homo sapiens]
Length = 728
Score = 33.1 bits (74), Expect = 0.76
Identities = 35/136 (25%), Positives = 57/136 (41%), Gaps = 15/136 (11%)
Query: 472 SLQRSGGAAPSAGPSSSN-RLPLKRTCSPFTEEFEPLPSKQAKEGDLQRVLLYVRRETEE 530
SLQ G + S G SSS + L+ TE E L KQ DLQ + ++ E
Sbjct: 530 SLQEQG--SKSEGESSSKLKQKLEAHMEKLTEVHEELQKKQELIEDLQPDINQNVQKINE 587
Query: 531 VFDALMLKTPDLKGLRNAISEKYGFPEENIYKVYKKCKRGILVNMDNNIIQHYSNHVAFL 590
+ AL K D+K + E YK+Y + R ++ +D + + +
Sbjct: 588 LEAALQKKDEDMKAM------------EERYKMYLEKARNVIKTLDPKLNPASAEIMLLR 635
Query: 591 LDMGELDGKIQIILKE 606
+ E + +I+I+ E
Sbjct: 636 KQLAEKERRIEILESE 651
>gi|5454102 transforming, acidic coiled-coil containing protein 3
[Homo sapiens]
Length = 838
Score = 32.7 bits (73), Expect = 0.99
Identities = 25/92 (27%), Positives = 36/92 (39%), Gaps = 8/92 (8%)
Query: 107 PLESPTHLMKFLTENVSGTPEYPDLLKKNNLMSLEGALPTPGKAAPLPAGPSKLEAGSVD 166
P+ + T M E SG P L++ + L +L+ +P P P P GP VD
Sbjct: 576 PVATETSSMHGANETPSGRPREAKLVEFDFLGALDIPVPGPPPGVPAPGGPPLSTGPIVD 635
Query: 167 SYLLPTTDM--------YDNGSLNSLFESIHG 190
D+ +N L S E +HG
Sbjct: 636 LLQYSQKDLDAVVKATQEENRELRSRCEELHG 667
>gi|7662228 synaptosomal-associated protein, 91kDa homolog [Homo
sapiens]
Length = 907
Score = 32.3 bits (72), Expect = 1.3
Identities = 38/166 (22%), Positives = 59/166 (35%), Gaps = 14/166 (8%)
Query: 119 TENVSGTPEYPDLLKKNNLMSLEGALPTPGKAAPLPAGPSKLEAGSVDSYLLP------T 172
T V+ P+ PD +L S + P A+P+P + SVD++ P +
Sbjct: 571 TPEVAAAPK-PDAAPSIDLFSTDAFSSPPQGASPVPESSLTADLLSVDAFAAPSPATTAS 629
Query: 173 TDMYDNGSLNSLFESIHGVPPTQRWQPDSTFKDDPQESM-----LFPDILKTSPEPPCPE 227
D+ + LF G ++ QP S S + SP P P
Sbjct: 630 PAKVDSSGVIDLFGDAFGSSASEP-QPASQAASSSSASADLLAGFGGSFMAPSPSPVTPA 688
Query: 228 DYPSLKSDFEYTLGSPKAIHIKSGESPMAYLNKGQFYPVTLRTPAG 273
L+ +FE G+ + S P + G T+ PAG
Sbjct: 689 QNNLLQPNFEAAFGTTPSTSSSSSFDPSVFDGLGDLLMPTM-APAG 733
>gi|35493801 ring finger protein 19 [Homo sapiens]
Length = 838
Score = 32.3 bits (72), Expect = 1.3
Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 4/112 (3%)
Query: 429 DSSNSGVKGCLLSGF--RGNETTYLRPETDLETPPVLFIPNVHFSSLQRSGGAAPSAGPS 486
++S + G +L+ + E + + D+E+ P F N SS+ AG S
Sbjct: 590 NASTKAMAGSILNSYIPLDKEGNSMEVQVDIESKPSKFRHNSGSSSVDDGSATRSHAGGS 649
Query: 487 SSNRLPLKRTCSPFTEEFEPLPSKQAKEGDLQRVLLYVRRETEEVFDALMLK 538
SS K + + +++ E K++K G L++ ET E DA +L+
Sbjct: 650 SSGLPEGKSSATKWSK--EATAGKKSKSGKLRKKGNMKINETREDMDAQLLE 699
>gi|35493782 ring finger protein 19 [Homo sapiens]
Length = 838
Score = 32.3 bits (72), Expect = 1.3
Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 4/112 (3%)
Query: 429 DSSNSGVKGCLLSGF--RGNETTYLRPETDLETPPVLFIPNVHFSSLQRSGGAAPSAGPS 486
++S + G +L+ + E + + D+E+ P F N SS+ AG S
Sbjct: 590 NASTKAMAGSILNSYIPLDKEGNSMEVQVDIESKPSKFRHNSGSSSVDDGSATRSHAGGS 649
Query: 487 SSNRLPLKRTCSPFTEEFEPLPSKQAKEGDLQRVLLYVRRETEEVFDALMLK 538
SS K + + +++ E K++K G L++ ET E DA +L+
Sbjct: 650 SSGLPEGKSSATKWSK--EATAGKKSKSGKLRKKGNMKINETREDMDAQLLE 699
>gi|50980301 myosin phosphatase-Rho interacting protein isoform 2
[Homo sapiens]
Length = 1025
Score = 32.3 bits (72), Expect = 1.3
Identities = 37/126 (29%), Positives = 49/126 (38%), Gaps = 23/126 (18%)
Query: 120 ENVSGTPE----YPDLLKKNNLMSLEGALPTPGKAAPLPAGPSKLEAGSVDSYLLPTTDM 175
E VSG E YP K+N + PTP + GP+K+ S S
Sbjct: 136 EIVSGWLEMLMVYPRTNKQNQKKKRKVEPPTPQEP-----GPAKVAVTSSSS-------- 182
Query: 176 YDNGSLNSLFESIHGVPPTQR--WQPDSTFKDDPQESMLFPDILKTSPEPPCPEDY--PS 231
+ S +S S VP T+ WQ + KD P S L P + +PP P
Sbjct: 183 --SSSSSSSIPSAEKVPTTKSTLWQEEMRTKDQPDGSSLSPAQSPSQSQPPAASSLREPG 240
Query: 232 LKSDFE 237
L+S E
Sbjct: 241 LESKEE 246
>gi|50980307 myosin phosphatase-Rho interacting protein isoform 1
[Homo sapiens]
Length = 1038
Score = 32.3 bits (72), Expect = 1.3
Identities = 37/126 (29%), Positives = 49/126 (38%), Gaps = 23/126 (18%)
Query: 120 ENVSGTPE----YPDLLKKNNLMSLEGALPTPGKAAPLPAGPSKLEAGSVDSYLLPTTDM 175
E VSG E YP K+N + PTP + GP+K+ S S
Sbjct: 136 EIVSGWLEMLMVYPRTNKQNQKKKRKVEPPTPQEP-----GPAKVAVTSSSS-------- 182
Query: 176 YDNGSLNSLFESIHGVPPTQR--WQPDSTFKDDPQESMLFPDILKTSPEPPCPEDY--PS 231
+ S +S S VP T+ WQ + KD P S L P + +PP P
Sbjct: 183 --SSSSSSSIPSAEKVPTTKSTLWQEEMRTKDQPDGSSLSPAQSPSQSQPPAASSLREPG 240
Query: 232 LKSDFE 237
L+S E
Sbjct: 241 LESKEE 246
>gi|4506049 hematopoietically expressed homeobox [Homo sapiens]
Length = 270
Score = 32.0 bits (71), Expect = 1.7
Identities = 32/147 (21%), Positives = 56/147 (38%), Gaps = 13/147 (8%)
Query: 17 LLKNDPVNLQKFSYTSEDEAWKTYLENPLTAATKAMMRVNGDDDSVAALSFLYDYYMGPK 76
LL++DP+ + W +L+ PL +R + D F Y+ P
Sbjct: 114 LLRHDPLG--------KPLLWSPFLQRPLHKRKGGQVRFSNDQTIELEKKFETQKYLSPP 165
Query: 77 EKRILSSSTGGRNDQGKRYYHGMEYETDLTPLESPTHLMKFLTENV-SGTPEYPDLLKKN 135
E++ L+ Q K ++ + E+P K E++ S + DL +
Sbjct: 166 ERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQENPQSNKKEELESLDSSCDQRQDLPSEQ 225
Query: 136 NLMSLEGALPTPGKAAPLPAGPSKLEA 162
N +GA + +P PA LE+
Sbjct: 226 N----KGASLDSSQCSPSPASQEDLES 248
>gi|148922920 DENN/MADD domain containing 4B [Homo sapiens]
Length = 1496
Score = 31.6 bits (70), Expect = 2.2
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 12/68 (17%)
Query: 98 GMEYETDLTPLESPTHLMKFLTENVSGTPEY-----PDLLKK--NNLMSLEGALPTPGKA 150
G E +TP E P L E TP+Y P+L + +L GALP PG +
Sbjct: 676 GSELTVFITPPEEPA-----LPEGSESTPQYCYDGFPELRAELFESLQEQPGALPVPGPS 730
Query: 151 APLPAGPS 158
P+ P+
Sbjct: 731 RSAPSSPA 738
>gi|116235460 YTH domain family, member 3 [Homo sapiens]
Length = 585
Score = 31.2 bits (69), Expect = 2.9
Identities = 39/187 (20%), Positives = 68/187 (36%), Gaps = 16/187 (8%)
Query: 57 GDDDSVAALSFLYDYYMGPKEKRILSSSTGGRNDQGKRYYHGMEYETDLTPLESPTHLMK 116
G +A S Y Y + I G ND + E +T L+ L
Sbjct: 143 GQSTQSSAYSSSYGYPPSSLGRAITDGQAGFGNDTLSKVPGISSIEQGMTGLKIGGDLTA 202
Query: 117 FLTENVSGTPEYPDL--LKKNNLMSLEGALPTPGKAAPLPAGPSKLEAG-------SVDS 167
+T+ V + + N++ + A P P A + P+K + +
Sbjct: 203 AVTKTVGTALSSSGMTSIATNSVPPVSSAAPKPTSWAAIARKPAKPQPKLKPKGNVGIGG 262
Query: 168 YLLPTTDMYDNGSLNSLFE--SIHGVPPTQRWQPDSTFKDDPQESMLFPDILKT-----S 220
+P + N ++ + E S+ PPTQ P T PQ + P ++++
Sbjct: 263 SAVPPPPIKHNMNIGTWDEKGSVVKAPPTQPVLPPQTIIQQPQPLIQPPPLVQSQLPQQQ 322
Query: 221 PEPPCPE 227
P+PP P+
Sbjct: 323 PQPPQPQ 329
>gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens]
Length = 1838
Score = 30.8 bits (68), Expect = 3.8
Identities = 39/155 (25%), Positives = 54/155 (34%), Gaps = 28/155 (18%)
Query: 91 QGKRYYHGMEYETDLTPLESPTHLMKFLTENVSGTPEYPDLLKKNNLMSLEGALPTPGKA 150
+G+ YY+ Y D L K E T E P+ L PTP +A
Sbjct: 269 EGETYYYEYPYYEDPEDLGKEPTPSKKPVEAAKETTEVPEELT-----------PTPTEA 317
Query: 151 APLP---AGPSKLEAGSVDSY-LLPTTDMYDNGSLNSLFESIHGVPPTQRWQPDS----- 201
AP+P G K E + Y +P+ D Y + L P Q P +
Sbjct: 318 APMPETSEGAGKEEDVGIGDYDYVPSEDYYTPSPYDDLTYGEGEENPDQPTDPGAGAEIP 377
Query: 202 TFKDDPQESMLFPDILKTSPEPPCPEDYPSLKSDF 236
T D S ++P PP E L+ +F
Sbjct: 378 TSTADTSNS--------SNPAPPPGEGADDLEGEF 404
>gi|45439359 triple functional domain (PTPRF interacting) [Homo
sapiens]
Length = 3097
Score = 30.8 bits (68), Expect = 3.8
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 478 GAAPSAGPSSSNRLPLKRTCSPFTEEFEPLPSKQAKE 514
GAAP AGPS+ +R P E EP+P + E
Sbjct: 2380 GAAPEAGPSAPSRRPPGADAEGSEREAEPIPKMKVLE 2416
>gi|40807477 retinoic acid induced 1 [Homo sapiens]
Length = 1906
Score = 30.8 bits (68), Expect = 3.8
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 470 FSSLQRSGGAAPSAGPSSSN--RLPLKRTCSPFTEEFEPLPSKQAKEGDLQRVLLYVRRE 527
F S +R G +P A S SN LP+ SP + + S D + ++L R +
Sbjct: 1092 FKSGKRVGKPSPKAASSPSNPAALPVASDSSPMGSKTKETDSPSTPGKDQRSMILRSRTK 1151
Query: 528 TEEVF 532
T+E+F
Sbjct: 1152 TQEIF 1156
>gi|112821681 G protein-regulated inducer of neurite outgrowth 1
[Homo sapiens]
Length = 1008
Score = 30.8 bits (68), Expect = 3.8
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 15/73 (20%)
Query: 138 MSLEGALPTPGKAAPLPAGPSKLEAGSVDSYLLPTTDMYDNGSLNSLFESIHGVPPTQRW 197
+S+ + TPGK P+P +G VD L + G + SL P ++
Sbjct: 570 VSIGKVVSTPGKTVPVP-------SGKVDPVSLGKAEAIPEGKVGSL--------PLEKG 614
Query: 198 QPDSTFKDDPQES 210
P +T K DP+ S
Sbjct: 615 SPVTTTKADPRAS 627
>gi|225735595 RNA polymerase II associated protein 3 isoform 3 [Homo
sapiens]
Length = 506
Score = 30.0 bits (66), Expect = 6.4
Identities = 39/163 (23%), Positives = 61/163 (37%), Gaps = 36/163 (22%)
Query: 107 PLESPTH------LMKFLTE---NVSGTPEYPD----LLKKNNLMSLEGALPTPGKAAPL 153
P+++P H L K + E N+ T + PD +NN ++L + G +
Sbjct: 260 PIDNPPHPGSTKPLKKVIIEETGNLIQTIDVPDSTTAAAPENNPINLANVIAATGTTS-- 317
Query: 154 PAGPSKLEAGSVDSYLLPTTDMYDNGSLNSLFESIHGVPPTQRWQPDSTFKDD------- 206
+ S L PT+D + + I V T QP ++ K D
Sbjct: 318 -------KKNSSQDDLFPTSD-----TPRAKVLKIEEVSDTSSLQPQASLKQDVCQSYSE 365
Query: 207 --PQESMLFPDILKTSPEPPCPEDYPSLKSDFEYTLGSPKAIH 247
P E P T+ PP P + L+SDF SP ++
Sbjct: 366 KMPIEIEQKPAQFATTVLPPIPANSFQLESDFRQLKSSPDMLY 408
>gi|225735591 RNA polymerase II associated protein 3 isoform 1 [Homo
sapiens]
Length = 665
Score = 30.0 bits (66), Expect = 6.4
Identities = 39/163 (23%), Positives = 61/163 (37%), Gaps = 36/163 (22%)
Query: 107 PLESPTH------LMKFLTE---NVSGTPEYPD----LLKKNNLMSLEGALPTPGKAAPL 153
P+++P H L K + E N+ T + PD +NN ++L + G +
Sbjct: 419 PIDNPPHPGSTKPLKKVIIEETGNLIQTIDVPDSTTAAAPENNPINLANVIAATGTTS-- 476
Query: 154 PAGPSKLEAGSVDSYLLPTTDMYDNGSLNSLFESIHGVPPTQRWQPDSTFKDD------- 206
+ S L PT+D + + I V T QP ++ K D
Sbjct: 477 -------KKNSSQDDLFPTSD-----TPRAKVLKIEEVSDTSSLQPQASLKQDVCQSYSE 524
Query: 207 --PQESMLFPDILKTSPEPPCPEDYPSLKSDFEYTLGSPKAIH 247
P E P T+ PP P + L+SDF SP ++
Sbjct: 525 KMPIEIEQKPAQFATTVLPPIPANSFQLESDFRQLKSSPDMLY 567
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,927,905
Number of Sequences: 37866
Number of extensions: 1337031
Number of successful extensions: 3884
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 3827
Number of HSP's gapped (non-prelim): 49
length of query: 607
length of database: 18,247,518
effective HSP length: 108
effective length of query: 499
effective length of database: 14,157,990
effective search space: 7064837010
effective search space used: 7064837010
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.