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Search of human proteins with 38045906
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|38045906 von Hippel-Lindau tumor suppressor isoform 2 [Homo
sapiens]
(172 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|38045906 von Hippel-Lindau tumor suppressor isoform 2 [Homo s... 356 5e-99
gi|4507891 von Hippel-Lindau tumor suppressor isoform 1 [Homo sa... 336 5e-93
gi|51972218 von Hippel-Lindau tumor suppressor-like [Homo sapiens] 103 6e-23
gi|4759128 solute carrier family 24 (sodium/potassium/calcium ex... 41 4e-04
gi|42518068 trans-golgi network protein 2 [Homo sapiens] 41 4e-04
gi|46276863 parathymosin [Homo sapiens] 40 0.001
gi|169213065 PREDICTED: similar to hCG1654128 [Homo sapiens] 39 0.002
gi|169213233 PREDICTED: similar to hCG1654128 [Homo sapiens] 39 0.002
gi|169207217 PREDICTED: zinc finger homeobox 2 [Homo sapiens] 39 0.003
gi|169207592 PREDICTED: zinc finger homeobox 2 [Homo sapiens] 39 0.003
gi|169207014 PREDICTED: zinc finger homeobox 2 [Homo sapiens] 39 0.003
gi|169212742 PREDICTED: similar to hCG1654128 [Homo sapiens] 38 0.004
gi|4506411 Ran GTPase activating protein 1 [Homo sapiens] 35 0.032
gi|94536805 splicing factor YT521-B isoform 2 [Homo sapiens] 35 0.032
gi|72534750 splicing factor YT521-B isoform 1 [Homo sapiens] 35 0.032
gi|222537747 hypothetical protein LOC342979 [Homo sapiens] 35 0.042
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens] 35 0.042
gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1 ... 35 0.042
gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2 ... 35 0.042
gi|105990539 neurofilament, light polypeptide 68kDa [Homo sapiens] 35 0.042
gi|7657013 apoptosis antagonizing transcription factor [Homo sap... 35 0.042
gi|109637791 transcription factor-like nuclear regulator [Homo s... 35 0.042
gi|108860697 zinc finger protein 592 [Homo sapiens] 35 0.042
gi|48255881 troponin T type 2, cardiac isoform 3 [Homo sapiens] 34 0.055
gi|48255879 troponin T type 2, cardiac isoform 2 [Homo sapiens] 34 0.055
gi|239743315 PREDICTED: hypothetical protein XP_002342820 [Homo ... 34 0.055
gi|239508997 PREDICTED: hypothetical protein [Homo sapiens] 34 0.055
gi|17975763 myelin transcription factor 1 [Homo sapiens] 34 0.055
gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Hom... 34 0.055
gi|83716024 kinesin family member 21B [Homo sapiens] 34 0.055
>gi|38045906 von Hippel-Lindau tumor suppressor isoform 2 [Homo
sapiens]
Length = 172
Score = 356 bits (914), Expect = 5e-99
Identities = 172/172 (100%), Positives = 172/172 (100%)
Query: 1 MPRRAENWDEAEVGAEEAGVEEYGPEEDGGEESGAEESGPEESGPEELGAEEEMEAGRPR 60
MPRRAENWDEAEVGAEEAGVEEYGPEEDGGEESGAEESGPEESGPEELGAEEEMEAGRPR
Sbjct: 1 MPRRAENWDEAEVGAEEAGVEEYGPEEDGGEESGAEESGPEESGPEELGAEEEMEAGRPR 60
Query: 61 PVLRSVNSREPSQVIFCNRSPRVVLPVWLNFDGEPQPYPTLPPGTGRRIHSYRVYTLKER 120
PVLRSVNSREPSQVIFCNRSPRVVLPVWLNFDGEPQPYPTLPPGTGRRIHSYRVYTLKER
Sbjct: 61 PVLRSVNSREPSQVIFCNRSPRVVLPVWLNFDGEPQPYPTLPPGTGRRIHSYRVYTLKER 120
Query: 121 CLQVVRSLVKPENYRRLDIVRSLYEDLEDHPNVQKDLERLTQERIAHQRMGD 172
CLQVVRSLVKPENYRRLDIVRSLYEDLEDHPNVQKDLERLTQERIAHQRMGD
Sbjct: 121 CLQVVRSLVKPENYRRLDIVRSLYEDLEDHPNVQKDLERLTQERIAHQRMGD 172
>gi|4507891 von Hippel-Lindau tumor suppressor isoform 1 [Homo
sapiens]
Length = 213
Score = 336 bits (862), Expect = 5e-93
Identities = 172/213 (80%), Positives = 172/213 (80%), Gaps = 41/213 (19%)
Query: 1 MPRRAENWDEAEVGAEEAGVEEYGPEEDGGEESGAEESGPEESGPEELGAEEEMEAGRPR 60
MPRRAENWDEAEVGAEEAGVEEYGPEEDGGEESGAEESGPEESGPEELGAEEEMEAGRPR
Sbjct: 1 MPRRAENWDEAEVGAEEAGVEEYGPEEDGGEESGAEESGPEESGPEELGAEEEMEAGRPR 60
Query: 61 PVLRSVNSREPSQVIFCNRSPRVVLPVWLNFDGEPQPYPTLPPGTGRRIHSYR------- 113
PVLRSVNSREPSQVIFCNRSPRVVLPVWLNFDGEPQPYPTLPPGTGRRIHSYR
Sbjct: 61 PVLRSVNSREPSQVIFCNRSPRVVLPVWLNFDGEPQPYPTLPPGTGRRIHSYRGHLWLFR 120
Query: 114 ----------------------------------VYTLKERCLQVVRSLVKPENYRRLDI 139
VYTLKERCLQVVRSLVKPENYRRLDI
Sbjct: 121 DAGTHDGLLVNQTELFVPSLNVDGQPIFANITLPVYTLKERCLQVVRSLVKPENYRRLDI 180
Query: 140 VRSLYEDLEDHPNVQKDLERLTQERIAHQRMGD 172
VRSLYEDLEDHPNVQKDLERLTQERIAHQRMGD
Sbjct: 181 VRSLYEDLEDHPNVQKDLERLTQERIAHQRMGD 213
>gi|51972218 von Hippel-Lindau tumor suppressor-like [Homo sapiens]
Length = 139
Score = 103 bits (258), Expect = 6e-23
Identities = 51/82 (62%), Positives = 62/82 (75%)
Query: 32 ESGAEESGPEESGPEELGAEEEMEAGRPRPVLRSVNSREPSQVIFCNRSPRVVLPVWLNF 91
++G +E+GPEE EELGAEEEM A PVLRSVNSRE S++I CN SPR+VLPVWLN+
Sbjct: 14 QAGTQEAGPEEYCQEELGAEEEMAARAAWPVLRSVNSRELSRIIICNHSPRIVLPVWLNY 73
Query: 92 DGEPQPYPTLPPGTGRRIHSYR 113
G+ PY TL PG RIH++R
Sbjct: 74 YGKLLPYLTLLPGRDFRIHNFR 95
>gi|4759128 solute carrier family 24 (sodium/potassium/calcium
exchanger), member 1 [Homo sapiens]
Length = 1099
Score = 41.2 bits (95), Expect = 4e-04
Identities = 33/92 (35%), Positives = 41/92 (44%), Gaps = 10/92 (10%)
Query: 5 AENWDEAEVGAEEAGVEEYG-------PEEDGGEESGAEESGPEESGPEELGAEEEMEAG 57
AEN EA+ +E GVE+ G EE+ EE EE EE EE EEE E G
Sbjct: 835 AENHGEAK--NDEKGVEDGGGSDGGDSEEEEEEEEEQEEEEEEEEQEEEEEEEEEEEEKG 892
Query: 58 RPRPVLRSVNSREPSQVIFCNRSPRVVLPVWL 89
P+ Q I+ P +V P+WL
Sbjct: 893 NEEPLSLDWPETRQKQAIYLFLLP-IVFPLWL 923
>gi|42518068 trans-golgi network protein 2 [Homo sapiens]
Length = 437
Score = 41.2 bits (95), Expect = 4e-04
Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 17 EAGVEEYGPEEDGGEESGAEESGPEESGPEELGAEEEMEAGRPRPVLRSVNSREPSQVIF 76
++G E+ P+ DG +SGAEE GP + GP + GAEE+ P V+ SR+
Sbjct: 209 KSGAEKQTPK-DGSNKSGAEEQGPID-GPSKSGAEEQTSKDSPNKVVPEQPSRKDHSKPI 266
Query: 77 CNRSPRVVLP 86
N S LP
Sbjct: 267 SNPSDNKELP 276
Score = 32.3 bits (72), Expect = 0.21
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 14 GAEEAGVEEYGPEEDGGEESGAEESGPEESGPEELGAEEEMEAGRPRPVLRSVNSRE 70
G+ ++G EE GP DG +SGAEE ++S P ++ E+ +P+ +++E
Sbjct: 220 GSNKSGAEEQGP-IDGPSKSGAEEQTSKDS-PNKVVPEQPSRKDHSKPISNPSDNKE 274
>gi|46276863 parathymosin [Homo sapiens]
Length = 102
Score = 39.7 bits (91), Expect = 0.001
Identities = 28/61 (45%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 3 RRAENWDEAEVGAEEAGVE--EYGPEEDGGEESGAEESGPEESGPE-ELGAEEEMEAGRP 59
R+ E +E E GAEE E E G EED GEE EE ++ GP + AEEE EA
Sbjct: 33 RKKEVVEEEENGAEEEEEETAEDGEEEDEGEEEDEEEEEEDDEGPALKRAAEEEDEADPK 92
Query: 60 R 60
R
Sbjct: 93 R 93
Score = 27.3 bits (59), Expect = 6.7
Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Query: 10 EAEVGAEEAGVEEYGPEEDGGEESGAE--ESGPEESGPEELGAEEEME 55
E + +E E EE+G EE E E G EE EE EEE E
Sbjct: 25 EEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEEDEEEEEE 72
>gi|169213065 PREDICTED: similar to hCG1654128 [Homo sapiens]
Length = 851
Score = 38.9 bits (89), Expect = 0.002
Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 9/74 (12%)
Query: 3 RRAENWD------EAEVGAEEAGVEEYGPEEDGGEESGAEESGPEESGPEELGAEEEMEA 56
RRAE D E +VG EE G E+ P E G ++ +E GPE++ P E G +E
Sbjct: 50 RRAELGDCDASPTEHDVGQEEDGPEDASPTEHGVDQ---QEDGPEDASPTEHGVNQEDGP 106
Query: 57 GRPRPVLRSVNSRE 70
P V+ +E
Sbjct: 107 EDASPTEHGVDQQE 120
Score = 37.4 bits (85), Expect = 0.006
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 9 DEAEVGAEEAGVEEYG--PEEDGGEESGA------EESGPEESGPEELGAEEEMEAGRPR 60
D+ E G E+A E+G EEDG E++ +E GPE++ P E G ++E R
Sbjct: 187 DQEEDGPEDASPTEHGVDQEEDGPEDASPTEHGVDQEDGPEDARPTEHGVDQEDGPEDAR 246
Query: 61 PVLRSVNSRE 70
P V+ +
Sbjct: 247 PTEHGVDQED 256
Score = 36.2 bits (82), Expect = 0.014
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Query: 10 EAEVGAEEAGVEEYGPEEDGGEESGAEESGPEESGPEELGAEEEMEAGRPRPVLRSVNSR 69
E V EE G E+ P E G ++ EE GPE++ P E G ++E RP V+
Sbjct: 183 EHGVDQEEDGPEDASPTEHGVDQ---EEDGPEDASPTEHGVDQEDGPEDARPTEHGVDQE 239
Query: 70 E 70
+
Sbjct: 240 D 240
Score = 34.7 bits (78), Expect = 0.042
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 9/54 (16%)
Query: 9 DEAEVGAEEAGVEEYG--PEEDGGEESGA-------EESGPEESGPEELGAEEE 53
D+ E G E+A E+G EEDG E++ +E GPE++ P E G ++E
Sbjct: 117 DQQEDGPEDARPTEHGIDQEEDGPEDASLTEHGVDQQEDGPEDASPTEHGIDQE 170
Score = 32.3 bits (72), Expect = 0.21
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 9/48 (18%)
Query: 9 DEAEVGAEEAGVEEYG--PEEDGGEESGA-------EESGPEESGPEE 47
D+ E G E+A + E+G +EDG E++ EE GPE++ P E
Sbjct: 134 DQEEDGPEDASLTEHGVDQQEDGPEDASPTEHGIDQEEDGPEDASPTE 181
Score = 26.9 bits (58), Expect = 8.7
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 8/50 (16%)
Query: 4 RAENWDEAEVGAEEAGVEEYGPEEDGGEESGAEESGPEESGPEELGAEEE 53
R + AE+G +A E+ + G EE GPE++ P E G +++
Sbjct: 45 RRSSQRRAELGDCDASPTEH--------DVGQEEDGPEDASPTEHGVDQQ 86
>gi|169213233 PREDICTED: similar to hCG1654128 [Homo sapiens]
Length = 1070
Score = 38.9 bits (89), Expect = 0.002
Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 9/74 (12%)
Query: 3 RRAENWD------EAEVGAEEAGVEEYGPEEDGGEESGAEESGPEESGPEELGAEEEMEA 56
RRAE D E +VG EE G E+ P E G ++ +E GPE++ P E G +E
Sbjct: 271 RRAELGDCDASPTEHDVGQEEDGPEDASPTEHGVDQ---QEDGPEDASPTEHGVNQEDGP 327
Query: 57 GRPRPVLRSVNSRE 70
P V+ +E
Sbjct: 328 EDASPTEHGVDQQE 341
Score = 38.9 bits (89), Expect = 0.002
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 9/71 (12%)
Query: 9 DEAEVGAEEAGVEEYG--PEEDGGEESGA-------EESGPEESGPEELGAEEEMEAGRP 59
D+ E G E+A E+G EEDG E++ EE GPE++ P E G ++E
Sbjct: 389 DQEEDGPEDASPTEHGVDQEEDGPEDASPTEHGVDQEEDGPEDASPTEHGVDQEDGPEDA 448
Query: 60 RPVLRSVNSRE 70
RP V+ +
Sbjct: 449 RPTEHGVDQED 459
Score = 37.4 bits (85), Expect = 0.006
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 9 DEAEVGAEEAGVEEYG--PEEDGGEESGA------EESGPEESGPEELGAEEEMEAGRPR 60
D+ E G E+A E+G EEDG E++ +E GPE++ P E G ++E R
Sbjct: 406 DQEEDGPEDASPTEHGVDQEEDGPEDASPTEHGVDQEDGPEDARPTEHGVDQEDGPEDAR 465
Query: 61 PVLRSVNSRE 70
P V+ +
Sbjct: 466 PTEHGVDQED 475
Score = 34.7 bits (78), Expect = 0.042
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 9/54 (16%)
Query: 9 DEAEVGAEEAGVEEYG--PEEDGGEESGA-------EESGPEESGPEELGAEEE 53
D+ E G E+A E+G EEDG E++ +E GPE++ P E G ++E
Sbjct: 338 DQQEDGPEDARPTEHGIDQEEDGPEDASLTEHGVDQQEDGPEDASPTEHGIDQE 391
Score = 26.9 bits (58), Expect = 8.7
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 8/50 (16%)
Query: 4 RAENWDEAEVGAEEAGVEEYGPEEDGGEESGAEESGPEESGPEELGAEEE 53
R + AE+G +A E+ + G EE GPE++ P E G +++
Sbjct: 266 RRSSQRRAELGDCDASPTEH--------DVGQEEDGPEDASPTEHGVDQQ 307
>gi|169207217 PREDICTED: zinc finger homeobox 2 [Homo sapiens]
Length = 2790
Score = 38.5 bits (88), Expect = 0.003
Identities = 27/69 (39%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Query: 6 ENWDEAEVGAEEAGVEEYGPEEDGGEESGAEESGPEESGP--EELGAEEEMEAGRPRPVL 63
E +EAE G EE VEE EE+ G E A GP P EEL E +AG P
Sbjct: 1918 EEEEEAERGEEEEEVEEEEVEEEQGLEPPAGPEGPLPEPPDGEELSQAEATKAGGKEPEE 1977
Query: 64 RSVNSREPS 72
++ S P+
Sbjct: 1978 KATPSPSPA 1986
>gi|169207592 PREDICTED: zinc finger homeobox 2 [Homo sapiens]
Length = 2706
Score = 38.5 bits (88), Expect = 0.003
Identities = 27/69 (39%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Query: 6 ENWDEAEVGAEEAGVEEYGPEEDGGEESGAEESGPEESGP--EELGAEEEMEAGRPRPVL 63
E +EAE G EE VEE EE+ G E A GP P EEL E +AG P
Sbjct: 1834 EEEEEAERGEEEEEVEEEEVEEEQGLEPPAGPEGPLPEPPDGEELSQAEATKAGGKEPEE 1893
Query: 64 RSVNSREPS 72
++ S P+
Sbjct: 1894 KATPSPSPA 1902
>gi|169207014 PREDICTED: zinc finger homeobox 2 [Homo sapiens]
Length = 2706
Score = 38.5 bits (88), Expect = 0.003
Identities = 27/69 (39%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Query: 6 ENWDEAEVGAEEAGVEEYGPEEDGGEESGAEESGPEESGP--EELGAEEEMEAGRPRPVL 63
E +EAE G EE VEE EE+ G E A GP P EEL E +AG P
Sbjct: 1834 EEEEEAERGEEEEEVEEEEVEEEQGLEPPAGPEGPLPEPPDGEELSQAEATKAGGKEPEE 1893
Query: 64 RSVNSREPS 72
++ S P+
Sbjct: 1894 KATPSPSPA 1902
>gi|169212742 PREDICTED: similar to hCG1654128 [Homo sapiens]
Length = 1015
Score = 38.1 bits (87), Expect = 0.004
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 11/73 (15%)
Query: 9 DEAEVGAEEAGVEEYG--PEEDGGEESGA---------EESGPEESGPEELGAEEEMEAG 57
D+ E G E+A E+G EEDG E++ EE GPE++ P E G ++E
Sbjct: 332 DQEEDGPEDASPTEHGVDQEEDGPEDASPTEHEHGVDQEEDGPEDASPTEHGVDQEDGPE 391
Query: 58 RPRPVLRSVNSRE 70
RP V+ +
Sbjct: 392 DARPTEHGVDQED 404
Score = 37.7 bits (86), Expect = 0.005
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 10 EAEVGAEEAGVEEYGPEEDGGEESGAEESGPEESGPEELGAEEEMEAGR-PRPVLRSVNS 68
E +VG EE G E+ P E G ++ +E GPE++ P E G +++ + RP V+
Sbjct: 243 EHDVGQEEDGPEDASPTEHGVDQ---QEDGPEDASPTEHGVDQQEDGPEDARPTEHGVDQ 299
Query: 69 RE 70
E
Sbjct: 300 EE 301
Score = 35.4 bits (80), Expect = 0.024
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 10 EAEVGAEEAGVEEYGPEEDGGEESGAEESGPEESGPEELGAEEE 53
E VG EE G E+ P E + G EE GPE++ P E G +++
Sbjct: 226 EHGVGQEEDGPEDASPTE---HDVGQEEDGPEDASPTEHGVDQQ 266
Score = 34.7 bits (78), Expect = 0.042
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 9/54 (16%)
Query: 9 DEAEVGAEEAGVEEYG--PEEDGGEESGA-------EESGPEESGPEELGAEEE 53
D+ E G E+A E+G EEDG E++ +E GPE++ P E G ++E
Sbjct: 281 DQQEDGPEDARPTEHGVDQEEDGPEDASLTEHGVDQQEDGPEDASPTEHGIDQE 334
Score = 34.7 bits (78), Expect = 0.042
Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 10/72 (13%)
Query: 9 DEAEVGAEEA-------GV--EEYGPEEDGGEESGAE-ESGPEESGPEELGAEEEMEAGR 58
D+ E G E+A GV EE GPE+ E G + E GPE++ P E G ++E
Sbjct: 349 DQEEDGPEDASPTEHEHGVDQEEDGPEDASPTEHGVDQEDGPEDARPTEHGVDQEDGPED 408
Query: 59 PRPVLRSVNSRE 70
RP V+ +
Sbjct: 409 ARPTEHGVDQED 420
>gi|4506411 Ran GTPase activating protein 1 [Homo sapiens]
Length = 587
Score = 35.0 bits (79), Expect = 0.032
Identities = 24/65 (36%), Positives = 29/65 (44%), Gaps = 5/65 (7%)
Query: 6 ENWDEAEVGAEEAGVEEYGPEEDGGEESGAEESGPEESGPEELGAEE-----EMEAGRPR 60
E +E E EEA EE EE+ EE EE P++ G E A + G P
Sbjct: 364 EEEEEGEEEEEEAEEEEEEDEEEEEEEEEEEEEEPQQRGQGEKSATPSRKILDPNTGEPA 423
Query: 61 PVLRS 65
PVL S
Sbjct: 424 PVLSS 428
Score = 34.3 bits (77), Expect = 0.055
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Query: 6 ENWDEAEVGAEEAGVEEYGPEEDGGEESGAEESGPEESGPEELGAEEEMEAGRPRPVLRS 65
E+ +E E G EE EE EE+ EE EE EE P++ G E ++ P +
Sbjct: 361 EDEEEEEEGEEEE--EEAEEEEEEDEEEEEEEEEEEEEEPQQRGQGE--KSATPSRKILD 416
Query: 66 VNSREPSQVI 75
N+ EP+ V+
Sbjct: 417 PNTGEPAPVL 426
Score = 32.7 bits (73), Expect = 0.16
Identities = 26/83 (31%), Positives = 33/83 (39%), Gaps = 12/83 (14%)
Query: 21 EEYGPEEDGGEESGAEESGPEESGPEELGAEEEMEAGRPRPVLRSVNSREPSQVIFCNRS 80
+E EE+ GEE E EE EE EEE E P+ + S PS+ I +
Sbjct: 360 DEDEEEEEEGEEEEEEAEEEEEEDEEEEEEEEEEEEEEPQQRGQGEKSATPSRKILDPNT 419
Query: 81 PRVVLPVWLNFDGEPQPYPTLPP 103
GEP P + PP
Sbjct: 420 ------------GEPAPVLSSPP 430
>gi|94536805 splicing factor YT521-B isoform 2 [Homo sapiens]
Length = 709
Score = 35.0 bits (79), Expect = 0.032
Identities = 20/52 (38%), Positives = 25/52 (48%)
Query: 4 RAENWDEAEVGAEEAGVEEYGPEEDGGEESGAEESGPEESGPEELGAEEEME 55
+ N + E G EE E+ EED E+ +E G EE EE EEE E
Sbjct: 194 QGNNTENEEEGVEEDVEEDEEVEEDAEEDEEVDEDGEEEEEEEEEEEEEEEE 245
Score = 28.1 bits (61), Expect = 3.9
Identities = 22/71 (30%), Positives = 28/71 (39%), Gaps = 19/71 (26%)
Query: 4 RAENWDEAEVGAEEAGV-------------------EEYGPEEDGGEESGAEESGPEESG 44
R+ + EV +EE G EE G EED E+ EE E+
Sbjct: 165 RSSQSSKEEVNSEEYGSDHETGSSGSSDEQGNNTENEEEGVEEDVEEDEEVEEDAEEDEE 224
Query: 45 PEELGAEEEME 55
+E G EEE E
Sbjct: 225 VDEDGEEEEEE 235
Score = 26.9 bits (58), Expect = 8.7
Identities = 24/78 (30%), Positives = 32/78 (41%), Gaps = 2/78 (2%)
Query: 6 ENWDEAEVGAEE-AGVEEYGPEEDGGEESGAEESGPEESGPEELGAEEEMEAGRPRPVLR 64
E +E E AEE V+E G EE+ EE EE EE E+ ++ E G
Sbjct: 210 EEDEEVEEDAEEDEEVDEDGEEEEEEEEEEEEEEEEEEEEYEQ-DERDQKEEGNDYDTRS 268
Query: 65 SVNSREPSQVIFCNRSPR 82
+ V F + S R
Sbjct: 269 EASDSGSESVSFTDGSVR 286
>gi|72534750 splicing factor YT521-B isoform 1 [Homo sapiens]
Length = 727
Score = 35.0 bits (79), Expect = 0.032
Identities = 20/52 (38%), Positives = 25/52 (48%)
Query: 4 RAENWDEAEVGAEEAGVEEYGPEEDGGEESGAEESGPEESGPEELGAEEEME 55
+ N + E G EE E+ EED E+ +E G EE EE EEE E
Sbjct: 194 QGNNTENEEEGVEEDVEEDEEVEEDAEEDEEVDEDGEEEEEEEEEEEEEEEE 245
Score = 28.1 bits (61), Expect = 3.9
Identities = 22/71 (30%), Positives = 28/71 (39%), Gaps = 19/71 (26%)
Query: 4 RAENWDEAEVGAEEAGV-------------------EEYGPEEDGGEESGAEESGPEESG 44
R+ + EV +EE G EE G EED E+ EE E+
Sbjct: 165 RSSQSSKEEVNSEEYGSDHETGSSGSSDEQGNNTENEEEGVEEDVEEDEEVEEDAEEDEE 224
Query: 45 PEELGAEEEME 55
+E G EEE E
Sbjct: 225 VDEDGEEEEEE 235
Score = 26.9 bits (58), Expect = 8.7
Identities = 24/78 (30%), Positives = 32/78 (41%), Gaps = 2/78 (2%)
Query: 6 ENWDEAEVGAEE-AGVEEYGPEEDGGEESGAEESGPEESGPEELGAEEEMEAGRPRPVLR 64
E +E E AEE V+E G EE+ EE EE EE E+ ++ E G
Sbjct: 210 EEDEEVEEDAEEDEEVDEDGEEEEEEEEEEEEEEEEEEEEYEQ-DERDQKEEGNDYDTRS 268
Query: 65 SVNSREPSQVIFCNRSPR 82
+ V F + S R
Sbjct: 269 EASDSGSESVSFTDGSVR 286
>gi|222537747 hypothetical protein LOC342979 [Homo sapiens]
Length = 673
Score = 34.7 bits (78), Expect = 0.042
Identities = 24/55 (43%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 3 RRAENWDEAEVGAEEAGVEE-YGPEEDGGEESGAEESGPEESGPEELGAEEEMEA 56
R + DE + GAEE VEE G E+ GGEE P E+ E G EE +EA
Sbjct: 465 RAEKEGDEEKRGAEEEEVEEPLGVEKKGGEEEPEATKEPLEA--ERKGGEETLEA 517
>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
Length = 1020
Score = 34.7 bits (78), Expect = 0.042
Identities = 24/53 (45%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Query: 9 DEAEVGAEEAGVEEYGPEEDGGEESGAEESGPEE--SGPEELGAEEEMEAGRP 59
+E E+ EE G EE+GGEE A E G EE S P E A E EA P
Sbjct: 468 EEVTEEEEKEAKEEEGKEEEGGEEEEA-EGGEEETKSPPAEEAASPEKEAKSP 519
Score = 28.5 bits (62), Expect = 3.0
Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 18/83 (21%)
Query: 9 DEAEVGAEEAGVEEYGPEED---GGEES-----GAEESGPEESG----------PEELGA 50
+E + EE G EE G EE+ GGEE E + PE+ P E +
Sbjct: 473 EEEKEAKEEEGKEEEGGEEEEAEGGEEETKSPPAEEAASPEKEAKSPVKEEAKSPAEAKS 532
Query: 51 EEEMEAGRPRPVLRSVNSREPSQ 73
E+ EA P V ++ P++
Sbjct: 533 PEKEEAKSPAEVKSPEKAKSPAK 555
>gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1
[Homo sapiens]
Length = 916
Score = 34.7 bits (78), Expect = 0.042
Identities = 25/68 (36%), Positives = 31/68 (45%), Gaps = 8/68 (11%)
Query: 3 RRAENWDEAEVGAEEAGVEEYGPEEDGGEESGAE-------ESGPEESGPEELGAE-EEM 54
+ E E E G EE E+ G + D EE G+E E G +E G E AE EE
Sbjct: 521 KEEEGEKEEEEGQEEEEEEDEGAKSDQAEEGGSEKEGSSEKEEGEQEEGETEAEAEGEEA 580
Query: 55 EAGRPRPV 62
EA + V
Sbjct: 581 EAKEEKKV 588
Score = 30.0 bits (66), Expect = 1.0
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 9 DEAEVGAEEAGVEEYGPEEDGGEESGAEESGPEESGPEELGAEEE 53
+E EV A+++ V+ PE E EE G EE E+ GA+ +
Sbjct: 502 EEEEVAAKKSPVKATAPEVKEEEGEKEEEEGQEEEEEEDEGAKSD 546
Score = 27.7 bits (60), Expect = 5.1
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 10/58 (17%)
Query: 9 DEAEVG-AEEAG--VEEYGPEEDG-------GEESGAEESGPEESGPEELGAEEEMEA 56
D+AE G +E+ G +E G +E+G GEE+ A+E E EE+ +EE+ A
Sbjct: 546 DQAEEGGSEKEGSSEKEEGEQEEGETEAEAEGEEAEAKEEKKVEEKSEEVATKEELVA 603
>gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2
[Homo sapiens]
Length = 540
Score = 34.7 bits (78), Expect = 0.042
Identities = 25/68 (36%), Positives = 31/68 (45%), Gaps = 8/68 (11%)
Query: 3 RRAENWDEAEVGAEEAGVEEYGPEEDGGEESGAE-------ESGPEESGPEELGAE-EEM 54
+ E E E G EE E+ G + D EE G+E E G +E G E AE EE
Sbjct: 145 KEEEGEKEEEEGQEEEEEEDEGAKSDQAEEGGSEKEGSSEKEEGEQEEGETEAEAEGEEA 204
Query: 55 EAGRPRPV 62
EA + V
Sbjct: 205 EAKEEKKV 212
Score = 30.0 bits (66), Expect = 1.0
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 9 DEAEVGAEEAGVEEYGPEEDGGEESGAEESGPEESGPEELGAEEE 53
+E EV A+++ V+ PE E EE G EE E+ GA+ +
Sbjct: 126 EEEEVAAKKSPVKATAPEVKEEEGEKEEEEGQEEEEEEDEGAKSD 170
Score = 27.7 bits (60), Expect = 5.1
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 10/58 (17%)
Query: 9 DEAEVG-AEEAG--VEEYGPEEDG-------GEESGAEESGPEESGPEELGAEEEMEA 56
D+AE G +E+ G +E G +E+G GEE+ A+E E EE+ +EE+ A
Sbjct: 170 DQAEEGGSEKEGSSEKEEGEQEEGETEAEAEGEEAEAKEEKKVEEKSEEVATKEELVA 227
>gi|105990539 neurofilament, light polypeptide 68kDa [Homo sapiens]
Length = 543
Score = 34.7 bits (78), Expect = 0.042
Identities = 20/48 (41%), Positives = 23/48 (47%)
Query: 6 ENWDEAEVGAEEAGVEEYGPEEDGGEESGAEESGPEESGPEELGAEEE 53
E D+ E EEA EE +E+ E EE G E G E AEEE
Sbjct: 479 EEKDKEEAEEEEAAEEEEAAKEESEEAKEEEEGGEGEEGEETKEAEEE 526
Score = 30.8 bits (68), Expect = 0.60
Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 9 DEAEVGAEEAGVEEYGPEEDGGEESGAEESGPEESGPEELGAEEEMEA 56
+E E EEA EE EE+ +E +EE+ EE G E EE EA
Sbjct: 477 EEEEKDKEEAEEEEAAEEEEAAKEE-SEEAKEEEEGGEGEEGEETKEA 523
Score = 29.6 bits (65), Expect = 1.3
Identities = 21/49 (42%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Query: 9 DEAEVGAEEAGVEEYGPEEDGGE-ESGAEESGPEESGPEELGAEEEMEA 56
+E E EE+ EE EE+GGE E G E EE + GA EE A
Sbjct: 493 EEEEAAKEES--EEAKEEEEGGEGEEGEETKEAEEEEKKVEGAGEEQAA 539
Score = 28.9 bits (63), Expect = 2.3
Identities = 18/44 (40%), Positives = 22/44 (50%)
Query: 15 AEEAGVEEYGPEEDGGEESGAEESGPEESGPEELGAEEEMEAGR 58
AEEA E E EE EE+ EE+ EE A+EE E +
Sbjct: 463 AEEAKDEPPSEGEAEEEEKDKEEAEEEEAAEEEEAAKEESEEAK 506
Score = 28.5 bits (62), Expect = 3.0
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 5 AENWDEAEVGAEEAGVEEYGPEEDGGEESGAEESGPEESGPEELGAEE 52
AE + A+ +EEA EE G E + GEE+ +E+ EE E G E+
Sbjct: 492 AEEEEAAKEESEEAKEEEEGGEGEEGEET--KEAEEEEKKVEGAGEEQ 537
>gi|7657013 apoptosis antagonizing transcription factor [Homo
sapiens]
Length = 560
Score = 34.7 bits (78), Expect = 0.042
Identities = 24/63 (38%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 3 RRAENWDEAEVGAEEAGVEEYGPEEDGGEESGAEESGPEESGPEELGAEEEMEAGRPRPV 62
R+A N D E + EE EE G+E +E G EE ++LGA EE E G R
Sbjct: 78 RKAWNEDHWEQTLPGSSDEEISDEEGSGDED-SEGLGLEEYDEDDLGAAEEQECGDHRES 136
Query: 63 LRS 65
+S
Sbjct: 137 KKS 139
>gi|109637791 transcription factor-like nuclear regulator [Homo
sapiens]
Length = 2624
Score = 34.7 bits (78), Expect = 0.042
Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 12/81 (14%)
Query: 2 PRRAENWDEAEVGAEEAGVEEYGPEEDGGEE------------SGAEESGPEESGPEELG 49
P + +E + EEAG E P+++G EE + ES P E PE
Sbjct: 916 PEVIDATEEIDKDLEEAGRREISPQKNGPEEVKPLGEVETDLKATGNESSPREKTPEVTD 975
Query: 50 AEEEMEAGRPRPVLRSVNSRE 70
A EE++ R ++ RE
Sbjct: 976 ATEEIDKNLEETGRRKISPRE 996
Score = 33.1 bits (74), Expect = 0.12
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 31 EESGAEESGPEESGPEELGAEEEMEAGRPRPVLRSVNSREPSQVI 75
EE+G E PEE+GPEE+ +EME + R +SRE ++ +
Sbjct: 1146 EETGRREISPEENGPEEVKPVDEMETDL-KTTGREGSSREKTREV 1189
Score = 31.2 bits (69), Expect = 0.46
Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 12/66 (18%)
Query: 2 PRRAENWDEAEVGAEEAGVEEYGPEEDGGEE------------SGAEESGPEESGPEELG 49
P + +E + EE G + P E+G EE + ES P E PE +
Sbjct: 971 PEVTDATEEIDKNLEETGRRKISPRENGPEEVKPVDEMETDLNATGRESSPREKTPEVID 1030
Query: 50 AEEEME 55
A EE++
Sbjct: 1031 ATEEID 1036
Score = 28.9 bits (63), Expect = 2.3
Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Query: 10 EAEVGAEEAGVEEYGP--EEDGGEESGAEESGPEESGPEELGAEEEMEAGRPRPVLRSVN 67
E E+ +E G+EE P E ++ E P E PE + A EE++ R ++
Sbjct: 1095 EREISPQENGLEEVKPLGEMQTDLKATGREISPREKTPEVIDATEEIDKDLEETGRREIS 1154
Query: 68 SRE 70
E
Sbjct: 1155 PEE 1157
>gi|108860697 zinc finger protein 592 [Homo sapiens]
Length = 1267
Score = 34.7 bits (78), Expect = 0.042
Identities = 23/53 (43%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Query: 3 RRAENWDEAEVGAEEAGVEEYGPEEDGGEESGAE--ESGPEESGPEELGAEEE 53
R E +E E A E VE PEE GEE E E+G EE E L A+ E
Sbjct: 1179 RDQEEEEEEEAAAAEMAVEVAEPEEGSGEEVPMETRENGLEECAGEPLSADPE 1231
>gi|48255881 troponin T type 2, cardiac isoform 3 [Homo sapiens]
Length = 285
Score = 34.3 bits (77), Expect = 0.055
Identities = 25/61 (40%), Positives = 31/61 (50%), Gaps = 7/61 (11%)
Query: 6 ENWDEAEVGAEEAGVEEY--GPEEDGGEESGAEESGPEESGPEELGAEEE---MEAGRPR 60
E ++E E EEA VEE EED E+ EE+ EE EE E E ME +P+
Sbjct: 9 EEYEEEE--QEEAAVEEQEEAAEEDAEAEAETEETRAEEDEEEEEAKEAEDGPMEESKPK 66
Query: 61 P 61
P
Sbjct: 67 P 67
Score = 26.9 bits (58), Expect = 8.7
Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
Query: 17 EAGVEEYGPEEDGGEESGAEESGPEESGPEELGAEEEMEAGR 58
E VEEY EE+ EE+ EE EE+ E+ AE E E R
Sbjct: 5 EEVVEEY--EEEEQEEAAVEEQ--EEAAEEDAEAEAETEETR 42
>gi|48255879 troponin T type 2, cardiac isoform 2 [Homo sapiens]
Length = 288
Score = 34.3 bits (77), Expect = 0.055
Identities = 25/61 (40%), Positives = 31/61 (50%), Gaps = 7/61 (11%)
Query: 6 ENWDEAEVGAEEAGVEEY--GPEEDGGEESGAEESGPEESGPEELGAEEE---MEAGRPR 60
E ++E E EEA VEE EED E+ EE+ EE EE E E ME +P+
Sbjct: 9 EEYEEEE--QEEAAVEEQEEAAEEDAEAEAETEETRAEEDEEEEEAKEAEDGPMEESKPK 66
Query: 61 P 61
P
Sbjct: 67 P 67
Score = 26.9 bits (58), Expect = 8.7
Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
Query: 17 EAGVEEYGPEEDGGEESGAEESGPEESGPEELGAEEEMEAGR 58
E VEEY EE+ EE+ EE EE+ E+ AE E E R
Sbjct: 5 EEVVEEY--EEEEQEEAAVEEQ--EEAAEEDAEAEAETEETR 42
>gi|239743315 PREDICTED: hypothetical protein XP_002342820 [Homo
sapiens]
Length = 248
Score = 34.3 bits (77), Expect = 0.055
Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 14/69 (20%)
Query: 8 WDEAEVGAEEAGV-------EEYGPEEDGGEESGAEESGP-------EESGPEELGAEEE 53
W + E GA AGV EE G + GGEE+ A+E+G E G G +
Sbjct: 45 WSQQEQGAAGAGVRVALPQVEELGRHDGGGEEAQAQEAGDGDERYILEGCGRARAGVPQT 104
Query: 54 MEAGRPRPV 62
G P P+
Sbjct: 105 RAPGSPLPL 113
>gi|239508997 PREDICTED: hypothetical protein [Homo sapiens]
Length = 248
Score = 34.3 bits (77), Expect = 0.055
Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 14/69 (20%)
Query: 8 WDEAEVGAEEAGV-------EEYGPEEDGGEESGAEESGP-------EESGPEELGAEEE 53
W + E GA AGV EE G + GGEE+ A+E+G E G G +
Sbjct: 45 WSQQEQGAAGAGVRVALPQVEELGRHDGGGEEAQAQEAGDGDERYILEGCGRARAGVPQT 104
Query: 54 MEAGRPRPV 62
G P P+
Sbjct: 105 RAPGSPLPL 113
>gi|17975763 myelin transcription factor 1 [Homo sapiens]
Length = 1121
Score = 34.3 bits (77), Expect = 0.055
Identities = 23/65 (35%), Positives = 28/65 (43%)
Query: 9 DEAEVGAEEAGVEEYGPEEDGGEESGAEESGPEESGPEELGAEEEMEAGRPRPVLRSVNS 68
+E E EE EE EE+ EE EE EE EE EEE E P + + S
Sbjct: 259 EEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAAPDVIFQEDTS 318
Query: 69 REPSQ 73
+Q
Sbjct: 319 HTSAQ 323
Score = 28.1 bits (61), Expect = 3.9
Identities = 20/68 (29%), Positives = 27/68 (39%)
Query: 16 EEAGVEEYGPEEDGGEESGAEESGPEESGPEELGAEEEMEAGRPRPVLRSVNSREPSQVI 75
+E EE EE+ EE EE EE EE EEE E V +E +
Sbjct: 261 DEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAAPDVIFQEDTSHT 320
Query: 76 FCNRSPRV 83
++P +
Sbjct: 321 SAQKAPEL 328
>gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Homo
sapiens]
Length = 1152
Score = 34.3 bits (77), Expect = 0.055
Identities = 22/50 (44%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Query: 8 WDEAEVGAEEAGVEEYGPEEDGGEESGAEESGPEESGPEELGAEEEMEAG 57
W+ E E G EE E + GE G EE G E G EE G EE E G
Sbjct: 955 WEGEEEEGEGEGEEEGEGEGEEGEGEGEEEEG-EGEGEEEEGEEEGEEEG 1003
Score = 33.1 bits (74), Expect = 0.12
Identities = 22/49 (44%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Query: 9 DEAEVGAEEAGVEEYGPEEDGGEESGAEESGPEESGPEELGAEEEMEAG 57
+E E EE EE G EE GEE G E EE G E+ E E E G
Sbjct: 984 EEGEGEGEEEEGEEEGEEEGEGEEEGEGEGEEEEEG--EVEGEVEGEEG 1030
Score = 32.0 bits (71), Expect = 0.27
Identities = 21/46 (45%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
Query: 16 EEAGVEEYGP--EEDGG--EESGAEESGPEESGPEELGAEEEMEAG 57
EE G EE+G EE+G EE E G EE EE+ E E E G
Sbjct: 728 EEGGEEEHGEGEEEEGDREEEEEKEGEGKEEGEGEEVEGEREKEEG 773
Score = 32.0 bits (71), Expect = 0.27
Identities = 24/51 (47%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Query: 6 ENWDEAEVGAEEAGVEEYGP-EEDGGEESGAEESGPEESGPEELGAEEEME 55
E E E E G E G EE+ GE G EE G EE G EE EEE E
Sbjct: 961 EGEGEGEEEGEGEGEEGEGEGEEEEGEGEGEEEEG-EEEGEEEGEGEEEGE 1010
Score = 31.2 bits (69), Expect = 0.46
Identities = 22/50 (44%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Query: 6 ENWDEAEVGAEEAGVEEYGPEEDGGEESGAEESGPEESGPEELGAEEEME 55
E +E G EE G E E GEE G E G EE G E G EE E
Sbjct: 834 EGEEEEGEGEEEEGEGEEEEGEGKGEEEGEEGEG-EEEGEEGEGEGEEEE 882
Score = 30.8 bits (68), Expect = 0.60
Identities = 21/47 (44%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Query: 9 DEAEVGAEEAGVEEYGPEEDGGEESGAEESGPEESGPEELGAEEEME 55
+E E EE G E E GEE E G EE G EE EEE E
Sbjct: 960 EEGEGEGEEEGEGEGEEGEGEGEEEEGEGEGEEEEGEEE--GEEEGE 1004
Score = 30.8 bits (68), Expect = 0.60
Identities = 25/56 (44%), Positives = 27/56 (48%), Gaps = 8/56 (14%)
Query: 6 ENWDEAEVGAEEAGVEEYGPEEDG---GEESGAEESGPEESGPEELG---AEEEME 55
E +E E EE E G EE+G GEE EE G EE EE G EEE E
Sbjct: 965 EGEEEGEGEGEEG--EGEGEEEEGEGEGEEEEGEEEGEEEGEGEEEGEGEGEEEEE 1018
Score = 29.6 bits (65), Expect = 1.3
Identities = 21/50 (42%), Positives = 22/50 (44%), Gaps = 3/50 (6%)
Query: 6 ENWDEAEVGAEEAGVEEYGPEEDGGEESGAEESGPEESGPEELGAEEEME 55
E E E G E G E EE+ GE E G EE G G EEE E
Sbjct: 809 EEGGEVEGGEVEEGKGEREEEEEEGEGEEEEGEGEEEEGE---GEEEEGE 855
Score = 29.3 bits (64), Expect = 1.8
Identities = 22/47 (46%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Query: 6 ENWDEAEVGAEEAGVEEYGPEEDGGEESGAEESGPEESGPEELGAEE 52
E E E G E G EE G EE+G EE EE G E EE G E
Sbjct: 978 EGEGEEEEGEGE-GEEEEG-EEEGEEEGEGEEEGEGEGEEEEEGEVE 1022
Score = 28.9 bits (63), Expect = 2.3
Identities = 25/53 (47%), Positives = 27/53 (50%), Gaps = 6/53 (11%)
Query: 4 RAENWDEAEVGAEEAGVEEYGPEEDG-GEESGAEESGPEESGPEELGAEEEME 55
R E +E E G EE G G EE+G GEE E G EE G E G EE E
Sbjct: 826 REEEEEEGE-GEEEEGE---GEEEEGEGEEEEGEGKG-EEEGEEGEGEEEGEE 873
Score = 28.5 bits (62), Expect = 3.0
Identities = 24/57 (42%), Positives = 26/57 (45%), Gaps = 11/57 (19%)
Query: 9 DEAEVGAEEAGVEEYGPEEDG-------GEESGAEESGP---EESGPEELGAEEEME 55
+E E EE G E G EE+G GE G EE G EE G E G EE E
Sbjct: 881 EEGEGEGEEEGEGE-GEEEEGEGEGEEEGEGEGEEEEGEGKGEEEGEEGEGEGEEEE 936
Score = 28.5 bits (62), Expect = 3.0
Identities = 21/50 (42%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Query: 6 ENWDEAEVGAEEAGVEEYGPEEDGGEESGAEESGPEESGPEELGAEEEME 55
E D G EE G E+ EE+ GE G EE E E G EEE E
Sbjct: 940 EGEDGEGEGEEEEG--EWEGEEEEGEGEGEEEGEGEGEEGEGEGEEEEGE 987
Score = 28.5 bits (62), Expect = 3.0
Identities = 24/56 (42%), Positives = 25/56 (44%), Gaps = 8/56 (14%)
Query: 6 ENWDEAEVGAEEAGVEEYGPEEDGGEESG------AEESGPEESGPEELGAEEEME 55
E E E EE G E G EE+ GE G E G EE G EE G E E E
Sbjct: 996 EEEGEEEGEGEEEGEGE-GEEEEEGEVEGEVEGEEGEGEGEEEEGEEE-GEEREKE 1049
Score = 28.5 bits (62), Expect = 3.0
Identities = 21/64 (32%), Positives = 26/64 (40%), Gaps = 2/64 (3%)
Query: 10 EAEVGAEEAGVEEYGPEEDGGEESGAEESGPEESGPEELGAEEEMEAGRPRPVLRSVNSR 69
E EV EE E G EE+G EE E E EEE E G+ + N R
Sbjct: 1022 EGEVEGEEG--EGEGEEEEGEEEGEEREKEGEGEENRRNREEEEEEEGKYQETGEEENER 1079
Query: 70 EPSQ 73
+ +
Sbjct: 1080 QDGE 1083
Score = 28.1 bits (61), Expect = 3.9
Identities = 21/58 (36%), Positives = 24/58 (41%), Gaps = 3/58 (5%)
Query: 3 RRAENWDEAEVGAEEAGVEEYGPEEDGGEESGAEESGPEESGPEELG---AEEEMEAG 57
++ E + E G EE E EE G EE G E G E G EEE E G
Sbjct: 776 KKEERAGKEEKGEEEGDQGEGEEEETEGRGEEKEEGGEVEGGEVEEGKGEREEEEEEG 833
Score = 28.1 bits (61), Expect = 3.9
Identities = 23/50 (46%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Query: 9 DEAEVGAEEAGVEEYGP-EEDGGEESG--AEESGPEESGPEELGAEEEME 55
+E E EE G E G EE+ GE G E G EE G E G EEE E
Sbjct: 915 EEGEGKGEEEGEEGEGEGEEEEGEGEGEDGEGEGEEEEGEWE-GEEEEGE 963
Score = 27.7 bits (60), Expect = 5.1
Identities = 23/53 (43%), Positives = 24/53 (45%), Gaps = 4/53 (7%)
Query: 6 ENWDEAEVGAEEAGV---EEYGPEEDGGEESGAEESGPEESGPEELGAEEEME 55
E +E G EE G EE G EE GEE G E G E E EEE E
Sbjct: 841 EGEEEEGEGEEEEGEGKGEEEG-EEGEGEEEGEEGEGEGEEEEGEGEGEEEGE 892
Score = 27.7 bits (60), Expect = 5.1
Identities = 20/50 (40%), Positives = 21/50 (42%)
Query: 6 ENWDEAEVGAEEAGVEEYGPEEDGGEESGAEESGPEESGPEELGAEEEME 55
E E E G E E EE+ GE G EE G E E G EE E
Sbjct: 929 EGEGEEEEGEGEGEDGEGEGEEEEGEWEGEEEEGEGEGEEEGEGEGEEGE 978
Score = 27.7 bits (60), Expect = 5.1
Identities = 20/50 (40%), Positives = 21/50 (42%)
Query: 6 ENWDEAEVGAEEAGVEEYGPEEDGGEESGAEESGPEESGPEELGAEEEME 55
E + E G EE EE G E EE G E E E G EEE E
Sbjct: 991 EEEEGEEEGEEEGEGEEEGEGEGEEEEEGEVEGEVEGEEGEGEGEEEEGE 1040
Score = 27.3 bits (59), Expect = 6.7
Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Query: 3 RRAENWDEAEVGAEEAGVEEYGPEEDGGEESGAEESGPEESGPEELGAEEEME 55
+ E +E E E E+ E E +G EE G EE G + G EEE E
Sbjct: 751 KEGEGKEEGEGEEVEGEREKEEGERKKEERAGKEEKG-EEEGDQGEGEEEETE 802
Score = 27.3 bits (59), Expect = 6.7
Identities = 19/52 (36%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Query: 6 ENWDEAEVGAEEAGVEEYGPEEDGGEESGAEESGPEESGPEELGAEEEMEAG 57
E E G EE G EE G + +G EE +E G E G E E G
Sbjct: 774 ERKKEERAGKEEKG-EEEGDQGEGEEEETEGRGEEKEEGGEVEGGEVEEGKG 824
Score = 27.3 bits (59), Expect = 6.7
Identities = 23/54 (42%), Positives = 25/54 (46%), Gaps = 4/54 (7%)
Query: 6 ENWDEAEVGAEEAGVEEYGPE-EDGGE-ESGAEESGPEESGPEELGAEEEMEAG 57
E D+ E EE E G E E+GGE E G E G E EE E E E G
Sbjct: 789 EEGDQGE--GEEEETEGRGEEKEEGGEVEGGEVEEGKGEREEEEEEGEGEEEEG 840
Score = 27.3 bits (59), Expect = 6.7
Identities = 21/54 (38%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Query: 4 RAENWDEAEVGAEEAGVEEYGPEEDGGEESGAEESGPEESGPEELGAEEEMEAG 57
+ E +E E G E EE EE+ GE E G E EE EEE E G
Sbjct: 823 KGEREEEEEEGEGEE--EEGEGEEEEGEGEEEEGEGKGEEEGEEGEGEEEGEEG 874
Score = 26.9 bits (58), Expect = 8.7
Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
Query: 10 EAEVGAEEAGVEEYGPEEDGGEESGAEESGPEESGPEELGAEEEMEAG 57
E E E EE +E+ GEE G + G EE E G EE E G
Sbjct: 767 EREKEEGERKKEERAGKEEKGEEEGDQGEGEEE---ETEGRGEEKEEG 811
Score = 26.9 bits (58), Expect = 8.7
Identities = 23/58 (39%), Positives = 25/58 (43%), Gaps = 6/58 (10%)
Query: 6 ENWDEAEVGAEEAGVEEYGPEEDG---GEESG---AEESGPEESGPEELGAEEEMEAG 57
E +E E E E G EE+G GEE G EE E G EE E E E G
Sbjct: 860 EEGEEGEGEEEGEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGEGEEEGEGEGEEEEG 917
Score = 26.9 bits (58), Expect = 8.7
Identities = 20/49 (40%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Query: 6 ENWDEAEVGAEEAGVEEYGPEE-DGGEESGAEESGPEESGPEELGAEEE 53
E +E E EE E G EE + GE G EE G E E EEE
Sbjct: 903 EGEEEGEGEGEEEEGEGKGEEEGEEGEGEGEEEEGEGEGEDGEGEGEEE 951
>gi|83716024 kinesin family member 21B [Homo sapiens]
Length = 1624
Score = 34.3 bits (77), Expect = 0.055
Identities = 21/51 (41%), Positives = 26/51 (50%)
Query: 5 AENWDEAEVGAEEAGVEEYGPEEDGGEESGAEESGPEESGPEELGAEEEME 55
+E DE E EE +E G EE+ G E E+SG EES + EE E
Sbjct: 579 SEETDENEAEEEEEERDESGCEEEEGREDEDEDSGSEESLVDSDSDPEEKE 629
Score = 31.6 bits (70), Expect = 0.35
Identities = 18/53 (33%), Positives = 25/53 (47%)
Query: 15 AEEAGVEEYGPEEDGGEESGAEESGPEESGPEELGAEEEMEAGRPRPVLRSVN 67
+EE E EE+ +ESG EE E E+ G+EE + P + VN
Sbjct: 579 SEETDENEAEEEEEERDESGCEEEEGREDEDEDSGSEESLVDSDSDPEEKEVN 631
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.134 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,520,341
Number of Sequences: 37866
Number of extensions: 502128
Number of successful extensions: 4023
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 163
Number of HSP's successfully gapped in prelim test: 192
Number of HSP's that attempted gapping in prelim test: 2611
Number of HSP's gapped (non-prelim): 1079
length of query: 172
length of database: 18,247,518
effective HSP length: 95
effective length of query: 77
effective length of database: 14,650,248
effective search space: 1128069096
effective search space used: 1128069096
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.