Guide to the Human Genome
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Name: DIXDC1 Sequence: fasta or formatted (683aa) NCBI GI: 83816971
Description:

DIX domain containing 1 isoform a

Not currently referenced in the text

Other entries for this name:
alt prot {472aa} DIX domain containing 1 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         44           4
 C cysteine            1.2          8           1
 D aspartate           5.9         40           3
 E glutamate           9.4         64           2
 F phenylalanine       1.9         13           1
 G glycine             5.0         34           1
 H histidine           3.1         21           2
 I isoleucine          3.7         25           3
 K lysine              6.4         44           2
 L leucine            11.1         76           3
 M methionine          2.0         14           1
 N asparagine          4.2         29           2
 P proline             4.2         29           2
 Q glutamine           7.8         53           2
 R arginine            6.6         45           1
 S serine              8.6         59           2
 T threonine           3.8         26           1
 V valine              5.7         39           1
 W tryptophan          1.0          7           1
 Y tyrosine            1.9         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   DIX domain containing 1 isoform a 
DIXDC1                0.678   DIX domain containing 1 isoform b 
NAV2                  0.043   neuron navigator 2 isoform 3 
NAV2                  0.042   neuron navigator 2 isoform 1 
NAV2                  0.042   neuron navigator 2 isoform 2 
DVL2                  0.039   dishevelled 2 
NAV3                  0.039   neuron navigator 3 
DVL1                  0.035   dishevelled 1 
DVL3                  0.035   dishevelled 3 
ACTN1                 0.035   actinin, alpha 1 isoform c 
ACTN1                 0.035   actinin, alpha 1 isoform a 
ACTN1                 0.035   actinin, alpha 1 isoform b 
ACTN4                 0.035   actinin, alpha 4 
ACTN3                 0.033   actinin, alpha 3 
ACTN2                 0.031   actinin, alpha 2 
SYNE2                 0.029   spectrin repeat containing, nuclear envelope 2 isof...
SYNE2                 0.029   spectrin repeat containing, nuclear envelope 2 isof...
SYNE1                 0.029   spectrin repeat containing, nuclear envelope 1 isof...
SPTB                  0.026   spectrin beta isoform a 
SPTB                  0.026   spectrin beta isoform b 
SPTBN1                0.026   spectrin, beta, non-erythrocytic 1 isoform 2 
SPTBN4                0.025   spectrin, beta, non-erythrocytic 4 isoform sigma1 [...
PLEC1                 0.025   plectin 1 isoform 3 
CLMN                  0.025   calmin 
SPTBN1                0.024   spectrin, beta, non-erythrocytic 1 isoform 1 
SYNE1                 0.024   spectrin repeat containing, nuclear envelope 1 isofo...
PLEC1                 0.024   plectin 1 isoform 8 
SPTBN2                0.023   spectrin, beta, non-erythrocytic 2 
DST                   0.023   dystonin isoform 1 
PLEC1                 0.023   plectin 1 isoform 11 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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