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Search of human proteins with 38016945
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|38016945 deformed epidermal autoregulatory factor 1 [Homo
sapiens]
(565 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|38016945 deformed epidermal autoregulatory factor 1 [Homo sap... 1134 0.0
gi|239749940 PREDICTED: similar to deformed epidermal autoregula... 610 e-174
gi|28329422 acute myelogenous leukemia 1 translocation 1 protein... 79 8e-15
gi|28329419 acute myelogenous leukemia 1 translocation 1 protein... 79 8e-15
gi|28329416 acute myelogenous leukemia 1 translocation 1 protein... 79 8e-15
gi|4757916 acute myelogenous leukemia 1 translocation 1 protein ... 79 8e-15
gi|28872803 myeloid translocation gene on chromosome 16 isoform ... 74 4e-13
gi|28872805 myeloid translocation gene on chromosome 16 isoform ... 74 4e-13
gi|89353295 core-binding factor, runt domain, alpha subunit 2; t... 68 2e-11
gi|74229008 core-binding factor, runt domain, alpha subunit 2; t... 68 2e-11
gi|4826663 core-binding factor, runt domain, alpha subunit 2; tr... 68 2e-11
gi|122939208 nuclear antigen Sp100 isoform 1 [Homo sapiens] 67 6e-11
gi|19923236 nuclear antigen Sp100 isoform 2 [Homo sapiens] 67 6e-11
gi|217330601 SP140 nuclear body protein isoform 1 [Homo sapiens] 65 2e-10
gi|134133279 SP140 nuclear body protein-like [Homo sapiens] 63 6e-10
gi|190343008 SP110 nuclear body protein isoform b [Homo sapiens] 58 3e-08
gi|190343010 SP110 nuclear body protein isoform a [Homo sapiens] 56 8e-08
gi|190343006 SP110 nuclear body protein isoform c [Homo sapiens] 56 8e-08
gi|34335264 zinc finger, MYND-type containing 8 isoform c [Homo ... 54 3e-07
gi|34335262 zinc finger, MYND-type containing 8 isoform a [Homo ... 54 3e-07
gi|34335266 zinc finger, MYND-type containing 8 isoform b [Homo ... 54 3e-07
gi|6912568 glucocorticoid modulatory element binding protein 2 [... 50 6e-06
gi|13435377 glucocorticoid modulatory element binding protein 1 ... 46 1e-04
gi|13435375 glucocorticoid modulatory element binding protein 1 ... 46 1e-04
gi|38505161 tudor domain containing 1 [Homo sapiens] 45 1e-04
gi|57529246 ubiquitin thioesterase 19 [Homo sapiens] 45 2e-04
gi|238814389 zinc finger, MYND domain containing 11 isoform a [H... 42 0.001
gi|238814385 zinc finger, MYND domain containing 11 isoform a [H... 42 0.001
gi|24497554 homeobox A13 [Homo sapiens] 42 0.001
gi|13489073 egl nine homolog 1 [Homo sapiens] 41 0.003
>gi|38016945 deformed epidermal autoregulatory factor 1 [Homo
sapiens]
Length = 565
Score = 1134 bits (2932), Expect = 0.0
Identities = 565/565 (100%), Positives = 565/565 (100%)
Query: 1 MEDSDSAAKQLGLAEAAAVAAAAAVAAAAAAAAGGEAEEPVLSRDEDSEEDADSEAERET 60
MEDSDSAAKQLGLAEAAAVAAAAAVAAAAAAAAGGEAEEPVLSRDEDSEEDADSEAERET
Sbjct: 1 MEDSDSAAKQLGLAEAAAVAAAAAVAAAAAAAAGGEAEEPVLSRDEDSEEDADSEAERET 60
Query: 61 PRVTAVAVMAAEPGHMDMGAEALPGPDEAAAAAAFAEVTTVTVANVGAAADNVFTTSVAN 120
PRVTAVAVMAAEPGHMDMGAEALPGPDEAAAAAAFAEVTTVTVANVGAAADNVFTTSVAN
Sbjct: 61 PRVTAVAVMAAEPGHMDMGAEALPGPDEAAAAAAFAEVTTVTVANVGAAADNVFTTSVAN 120
Query: 121 AASISGHVLSGRTALQIGDSLNTEKATLIVVHTDGSIVETTGLKGPAAPLTPGPQSPPTP 180
AASISGHVLSGRTALQIGDSLNTEKATLIVVHTDGSIVETTGLKGPAAPLTPGPQSPPTP
Sbjct: 121 AASISGHVLSGRTALQIGDSLNTEKATLIVVHTDGSIVETTGLKGPAAPLTPGPQSPPTP 180
Query: 181 LAPGQEKGGTKYNWDPSVYDSELPVRCRNISGTLYKNRLGSGGRGRCIKQGENWYSPTEF 240
LAPGQEKGGTKYNWDPSVYDSELPVRCRNISGTLYKNRLGSGGRGRCIKQGENWYSPTEF
Sbjct: 181 LAPGQEKGGTKYNWDPSVYDSELPVRCRNISGTLYKNRLGSGGRGRCIKQGENWYSPTEF 240
Query: 241 EAMAGRASSKDWKRSIRYAGRPLQCLIQDGILNPHAASCTCAACCDDMTLSGPVRLFVPY 300
EAMAGRASSKDWKRSIRYAGRPLQCLIQDGILNPHAASCTCAACCDDMTLSGPVRLFVPY
Sbjct: 241 EAMAGRASSKDWKRSIRYAGRPLQCLIQDGILNPHAASCTCAACCDDMTLSGPVRLFVPY 300
Query: 301 KRRKKENELPTTPVKKDSPKNITLLPATAATTFTVTPSGQITTSGALTFDRASTVEATAV 360
KRRKKENELPTTPVKKDSPKNITLLPATAATTFTVTPSGQITTSGALTFDRASTVEATAV
Sbjct: 301 KRRKKENELPTTPVKKDSPKNITLLPATAATTFTVTPSGQITTSGALTFDRASTVEATAV 360
Query: 361 ISESPAQGDVFAGATVQEASVQPPCRASHPEPHYPGYQDSCQIAPFPEAALPTSHPKIVL 420
ISESPAQGDVFAGATVQEASVQPPCRASHPEPHYPGYQDSCQIAPFPEAALPTSHPKIVL
Sbjct: 361 ISESPAQGDVFAGATVQEASVQPPCRASHPEPHYPGYQDSCQIAPFPEAALPTSHPKIVL 420
Query: 421 TSLPALAVPPPTPTKAAPPALVNGLELSEPRSWLYLEEMVNSLLNTAQQLKTLFEQAKHA 480
TSLPALAVPPPTPTKAAPPALVNGLELSEPRSWLYLEEMVNSLLNTAQQLKTLFEQAKHA
Sbjct: 421 TSLPALAVPPPTPTKAAPPALVNGLELSEPRSWLYLEEMVNSLLNTAQQLKTLFEQAKHA 480
Query: 481 STYREAATNQAKIHADAERKEQSCVNCGREAMSECTGCHKVNYCSTFCQRKDWKDHQHIC 540
STYREAATNQAKIHADAERKEQSCVNCGREAMSECTGCHKVNYCSTFCQRKDWKDHQHIC
Sbjct: 481 STYREAATNQAKIHADAERKEQSCVNCGREAMSECTGCHKVNYCSTFCQRKDWKDHQHIC 540
Query: 541 GQSAAVTVQADEVHVAESVMEKVTV 565
GQSAAVTVQADEVHVAESVMEKVTV
Sbjct: 541 GQSAAVTVQADEVHVAESVMEKVTV 565
>gi|239749940 PREDICTED: similar to deformed epidermal
autoregulatory factor 1 [Homo sapiens]
Length = 426
Score = 610 bits (1573), Expect = e-174
Identities = 297/299 (99%), Positives = 298/299 (99%)
Query: 267 IQDGILNPHAASCTCAACCDDMTLSGPVRLFVPYKRRKKENELPTTPVKKDSPKNITLLP 326
+ DGILNPHAASCTCAACCDDMTLSGPVRLFVPYKRRKKENELPTTPVKKDSPKNITLLP
Sbjct: 128 VLDGILNPHAASCTCAACCDDMTLSGPVRLFVPYKRRKKENELPTTPVKKDSPKNITLLP 187
Query: 327 ATAATTFTVTPSGQITTSGALTFDRASTVEATAVISESPAQGDVFAGATVQEASVQPPCR 386
ATAATTFTVTPSGQITTSGALTFDRASTVEATAVISESPAQGDVFAGATVQEASVQPPCR
Sbjct: 188 ATAATTFTVTPSGQITTSGALTFDRASTVEATAVISESPAQGDVFAGATVQEASVQPPCR 247
Query: 387 ASHPEPHYPGYQDSCQIAPFPEAALPTSHPKIVLTSLPALAVPPPTPTKAAPPALVNGLE 446
ASHPEPHYPGYQDSCQIAPFPEAALPTSHPKIVLTSLPALAVPPPTPTKAAPPALVNGLE
Sbjct: 248 ASHPEPHYPGYQDSCQIAPFPEAALPTSHPKIVLTSLPALAVPPPTPTKAAPPALVNGLE 307
Query: 447 LSEPRSWLYLEEMVNSLLNTAQQLKTLFEQAKHASTYREAATNQAKIHADAERKEQSCVN 506
LSEPRSWLYLEEMVNSLLNTAQQLKTLFEQAKHASTYREAATNQAKIHADAERKEQSCVN
Sbjct: 308 LSEPRSWLYLEEMVNSLLNTAQQLKTLFEQAKHASTYREAATNQAKIHADAERKEQSCVN 367
Query: 507 CGREAMSECTGCHKVNYCSTFCQRKDWKDHQHICGQSAAVTVQADEVHVAESVMEKVTV 565
CGREAMSECTGCHKVNYCSTFCQRKDWKDHQHICGQSAAVTVQADEVHVAESVMEKVTV
Sbjct: 368 CGREAMSECTGCHKVNYCSTFCQRKDWKDHQHICGQSAAVTVQADEVHVAESVMEKVTV 426
Score = 243 bits (620), Expect = 3e-64
Identities = 130/131 (99%), Positives = 130/131 (99%)
Query: 1 MEDSDSAAKQLGLAEAAAVAAAAAVAAAAAAAAGGEAEEPVLSRDEDSEEDADSEAERET 60
MEDSDSAAKQLGLAEAAAVAAAAAVAAAAAAAAGGEAEEPVLSRDEDSEEDADSEAERET
Sbjct: 1 MEDSDSAAKQLGLAEAAAVAAAAAVAAAAAAAAGGEAEEPVLSRDEDSEEDADSEAERET 60
Query: 61 PRVTAVAVMAAEPGHMDMGAEALPGPDEAAAAAAFAEVTTVTVANVGAAADNVFTTSVAN 120
PRVTAVAVMAAEPGHMDMGAEALPGPDEAAAAAAFAEVTTVTVANVGAAADNVFTTSVAN
Sbjct: 61 PRVTAVAVMAAEPGHMDMGAEALPGPDEAAAAAAFAEVTTVTVANVGAAADNVFTTSVAN 120
Query: 121 AASISGHVLSG 131
AASISGHVL G
Sbjct: 121 AASISGHVLDG 131
>gi|28329422 acute myelogenous leukemia 1 translocation 1 protein
isoform MTG8c [Homo sapiens]
Length = 567
Score = 79.3 bits (194), Expect = 8e-15
Identities = 34/80 (42%), Positives = 45/80 (56%)
Query: 480 ASTYREAATNQAKIHADAERKEQSCVNCGREAMSECTGCHKVNYCSTFCQRKDWKDHQHI 539
A R+AA + + E +SC NCGR+A C+GC+ YC +FCQ KDW+ H HI
Sbjct: 454 AEAKRQAAEDALAVINQQEDSSESCWNCGRKASETCSGCNTARYCGSFCQHKDWEKHHHI 513
Query: 540 CGQSAAVTVQADEVHVAESV 559
CGQ+ Q D V+ SV
Sbjct: 514 CGQTLQAQQQGDTPAVSSSV 533
>gi|28329419 acute myelogenous leukemia 1 translocation 1 protein
isoform MTG8c [Homo sapiens]
Length = 567
Score = 79.3 bits (194), Expect = 8e-15
Identities = 34/80 (42%), Positives = 45/80 (56%)
Query: 480 ASTYREAATNQAKIHADAERKEQSCVNCGREAMSECTGCHKVNYCSTFCQRKDWKDHQHI 539
A R+AA + + E +SC NCGR+A C+GC+ YC +FCQ KDW+ H HI
Sbjct: 454 AEAKRQAAEDALAVINQQEDSSESCWNCGRKASETCSGCNTARYCGSFCQHKDWEKHHHI 513
Query: 540 CGQSAAVTVQADEVHVAESV 559
CGQ+ Q D V+ SV
Sbjct: 514 CGQTLQAQQQGDTPAVSSSV 533
>gi|28329416 acute myelogenous leukemia 1 translocation 1 protein
isoform MTG8b [Homo sapiens]
Length = 604
Score = 79.3 bits (194), Expect = 8e-15
Identities = 34/80 (42%), Positives = 45/80 (56%)
Query: 480 ASTYREAATNQAKIHADAERKEQSCVNCGREAMSECTGCHKVNYCSTFCQRKDWKDHQHI 539
A R+AA + + E +SC NCGR+A C+GC+ YC +FCQ KDW+ H HI
Sbjct: 491 AEAKRQAAEDALAVINQQEDSSESCWNCGRKASETCSGCNTARYCGSFCQHKDWEKHHHI 550
Query: 540 CGQSAAVTVQADEVHVAESV 559
CGQ+ Q D V+ SV
Sbjct: 551 CGQTLQAQQQGDTPAVSSSV 570
>gi|4757916 acute myelogenous leukemia 1 translocation 1 protein
isoform MTG8a [Homo sapiens]
Length = 577
Score = 79.3 bits (194), Expect = 8e-15
Identities = 34/80 (42%), Positives = 45/80 (56%)
Query: 480 ASTYREAATNQAKIHADAERKEQSCVNCGREAMSECTGCHKVNYCSTFCQRKDWKDHQHI 539
A R+AA + + E +SC NCGR+A C+GC+ YC +FCQ KDW+ H HI
Sbjct: 464 AEAKRQAAEDALAVINQQEDSSESCWNCGRKASETCSGCNTARYCGSFCQHKDWEKHHHI 523
Query: 540 CGQSAAVTVQADEVHVAESV 559
CGQ+ Q D V+ SV
Sbjct: 524 CGQTLQAQQQGDTPAVSSSV 543
>gi|28872803 myeloid translocation gene on chromosome 16 isoform
MTG16a [Homo sapiens]
Length = 653
Score = 73.9 bits (180), Expect = 4e-13
Identities = 39/104 (37%), Positives = 56/104 (53%), Gaps = 7/104 (6%)
Query: 456 LEEMVNSLLNTAQQLKTLFEQAKH----ASTYREAATNQAKIHADAERKEQSCVNCGREA 511
L++ V+ A +L T E+AK A R+A+ + + E +SC NCGR+A
Sbjct: 505 LQKAVSDAERKAHELITT-ERAKMERALAEAKRQASEDALTVINQQEDSSESCWNCGRKA 563
Query: 512 MSECTGCHKVNYCSTFCQRKDWKDHQHICGQS--AAVTVQADEV 553
C+GC+ YC +FCQ +DW+ H H+CGQS V AD V
Sbjct: 564 SETCSGCNAARYCGSFCQHRDWEKHHHVCGQSLQGPTAVVADPV 607
>gi|28872805 myeloid translocation gene on chromosome 16 isoform
MTG16b [Homo sapiens]
Length = 567
Score = 73.9 bits (180), Expect = 4e-13
Identities = 39/104 (37%), Positives = 56/104 (53%), Gaps = 7/104 (6%)
Query: 456 LEEMVNSLLNTAQQLKTLFEQAKH----ASTYREAATNQAKIHADAERKEQSCVNCGREA 511
L++ V+ A +L T E+AK A R+A+ + + E +SC NCGR+A
Sbjct: 419 LQKAVSDAERKAHELITT-ERAKMERALAEAKRQASEDALTVINQQEDSSESCWNCGRKA 477
Query: 512 MSECTGCHKVNYCSTFCQRKDWKDHQHICGQS--AAVTVQADEV 553
C+GC+ YC +FCQ +DW+ H H+CGQS V AD V
Sbjct: 478 SETCSGCNAARYCGSFCQHRDWEKHHHVCGQSLQGPTAVVADPV 521
>gi|89353295 core-binding factor, runt domain, alpha subunit 2;
translocated to, 2 isoform MTGR1a [Homo sapiens]
Length = 575
Score = 68.2 bits (165), Expect = 2e-11
Identities = 26/64 (40%), Positives = 39/64 (60%)
Query: 480 ASTYREAATNQAKIHADAERKEQSCVNCGREAMSECTGCHKVNYCSTFCQRKDWKDHQHI 539
A R+AA + + + E ++C NCGR+A C+GC+ YC +FCQ KDW+ H +
Sbjct: 454 ADVKRQAAEDAFLVINEQEESTENCWNCGRKASETCSGCNIARYCGSFCQHKDWERHHRL 513
Query: 540 CGQS 543
CGQ+
Sbjct: 514 CGQN 517
>gi|74229008 core-binding factor, runt domain, alpha subunit 2;
translocated to, 2 isoform MTGR1c [Homo sapiens]
Length = 595
Score = 68.2 bits (165), Expect = 2e-11
Identities = 26/64 (40%), Positives = 39/64 (60%)
Query: 480 ASTYREAATNQAKIHADAERKEQSCVNCGREAMSECTGCHKVNYCSTFCQRKDWKDHQHI 539
A R+AA + + + E ++C NCGR+A C+GC+ YC +FCQ KDW+ H +
Sbjct: 474 ADVKRQAAEDAFLVINEQEESTENCWNCGRKASETCSGCNIARYCGSFCQHKDWERHHRL 533
Query: 540 CGQS 543
CGQ+
Sbjct: 534 CGQN 537
>gi|4826663 core-binding factor, runt domain, alpha subunit 2;
translocated to, 2 isoform MTGR1b [Homo sapiens]
Length = 604
Score = 68.2 bits (165), Expect = 2e-11
Identities = 26/64 (40%), Positives = 39/64 (60%)
Query: 480 ASTYREAATNQAKIHADAERKEQSCVNCGREAMSECTGCHKVNYCSTFCQRKDWKDHQHI 539
A R+AA + + + E ++C NCGR+A C+GC+ YC +FCQ KDW+ H +
Sbjct: 483 ADVKRQAAEDAFLVINEQEESTENCWNCGRKASETCSGCNIARYCGSFCQHKDWERHHRL 542
Query: 540 CGQS 543
CGQ+
Sbjct: 543 CGQN 546
>gi|122939208 nuclear antigen Sp100 isoform 1 [Homo sapiens]
Length = 885
Score = 66.6 bits (161), Expect = 6e-11
Identities = 32/73 (43%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 201 SELPVRCRNISGTLYKNRLGSGGRGRCIK-QGENWYSPTEFEAMAGRASSKDWKRSIRYA 259
SELPV C + GTLYK R G +CI+ + + W++P EFE R +SK+WK SIR
Sbjct: 603 SELPVTCGEVKGTLYKERFKQGTSKKCIQSEDKKWFTPREFEIEGDRGASKNWKLSIRCG 662
Query: 260 GRPLQCLIQDGIL 272
G L+ L+++ L
Sbjct: 663 GYTLKVLMENKFL 675
>gi|19923236 nuclear antigen Sp100 isoform 2 [Homo sapiens]
Length = 879
Score = 66.6 bits (161), Expect = 6e-11
Identities = 32/73 (43%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 201 SELPVRCRNISGTLYKNRLGSGGRGRCIK-QGENWYSPTEFEAMAGRASSKDWKRSIRYA 259
SELPV C + GTLYK R G +CI+ + + W++P EFE R +SK+WK SIR
Sbjct: 603 SELPVTCGEVKGTLYKERFKQGTSKKCIQSEDKKWFTPREFEIEGDRGASKNWKLSIRCG 662
Query: 260 GRPLQCLIQDGIL 272
G L+ L+++ L
Sbjct: 663 GYTLKVLMENKFL 675
>gi|217330601 SP140 nuclear body protein isoform 1 [Homo sapiens]
Length = 867
Score = 64.7 bits (156), Expect = 2e-10
Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 203 LPVRCRNISGTLYKNRLGSGGRGRCIKQGEN-WYSPTEFEAMAGRASSKDWKRSIRYAGR 261
LPV C + G L+K +L G +CI+ + W++PTEFE G A SK+W+ S+R G
Sbjct: 590 LPVTCGGVKGILHKKKLQQGILVKCIQTEDGKWFTPTEFEIKGGHARSKNWRLSVRCGGW 649
Query: 262 PLQCLIQDGIL 272
PL+ L+++G L
Sbjct: 650 PLRWLMENGFL 660
>gi|134133279 SP140 nuclear body protein-like [Homo sapiens]
Length = 580
Score = 63.2 bits (152), Expect = 6e-10
Identities = 31/74 (41%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 203 LPVRCRNISGTLYKNRLGSGGRGRCIKQGEN-WYSPTEFEAMAGRASSKDWKRSIRYAGR 261
LPV C + G L+K +L G +CI+ + W++P EFE G A SK+W+ S+R G
Sbjct: 303 LPVTCGGVKGILHKEKLEQGTLAKCIQTEDGKWFTPMEFEIKGGYARSKNWRLSVRCGGW 362
Query: 262 PLQCLIQDGIL-NP 274
PL+ L+++G L NP
Sbjct: 363 PLRRLMEEGSLPNP 376
>gi|190343008 SP110 nuclear body protein isoform b [Homo sapiens]
Length = 549
Score = 57.8 bits (138), Expect = 3e-08
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 201 SELPVRCRNISGTLYKNRLGSGGRGRCIKQGEN-WYSPTEFEAMAGRASSKDWKRSIRYA 259
S+LPV C G LYK ++ G +CI+ + W +P EFE ++K+WKR+IR
Sbjct: 462 SKLPVTCGEAKGILYKKKMKHGSSVKCIRNEDGTWLTPNEFEVEGKGRNAKNWKRNIRCE 521
Query: 260 GRPLQCLIQDGIL 272
G L L++ G+L
Sbjct: 522 GMTLGELLKSGLL 534
>gi|190343010 SP110 nuclear body protein isoform a [Homo sapiens]
Length = 689
Score = 56.2 bits (134), Expect = 8e-08
Identities = 31/86 (36%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Query: 201 SELPVRCRNISGTLYKNRLGSGGRGRCIKQGEN-WYSPTEFEAMAGRASSKDWKRSIRYA 259
S+LPV C G LYK ++ G +CI+ + W +P EFE ++K+WKR+IR
Sbjct: 462 SKLPVTCGEAKGILYKKKMKHGSSVKCIRNEDGTWLTPNEFEVEGKGRNAKNWKRNIRCE 521
Query: 260 GRPLQCLIQDGILNPHAASCTCAACC 285
G L G L S C CC
Sbjct: 522 GMTL------GELLKRKNSDECEVCC 541
>gi|190343006 SP110 nuclear body protein isoform c [Homo sapiens]
Length = 713
Score = 56.2 bits (134), Expect = 8e-08
Identities = 31/86 (36%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Query: 201 SELPVRCRNISGTLYKNRLGSGGRGRCIKQGEN-WYSPTEFEAMAGRASSKDWKRSIRYA 259
S+LPV C G LYK ++ G +CI+ + W +P EFE ++K+WKR+IR
Sbjct: 462 SKLPVTCGEAKGILYKKKMKHGSSVKCIRNEDGTWLTPNEFEVEGKGRNAKNWKRNIRCE 521
Query: 260 GRPLQCLIQDGILNPHAASCTCAACC 285
G L G L S C CC
Sbjct: 522 GMTL------GELLKRKNSDECEVCC 541
>gi|34335264 zinc finger, MYND-type containing 8 isoform c [Homo
sapiens]
Length = 1135
Score = 54.3 bits (129), Expect = 3e-07
Identities = 33/119 (27%), Positives = 54/119 (45%), Gaps = 7/119 (5%)
Query: 449 EPRSWLY---LEEMVNSLLNTAQQLKTLFEQAKHA--STYREAATNQAKIHADAERKEQS 503
E WL+ L EM ++L T +++ EQ + + ++ + + D +K+Q
Sbjct: 917 EKLQWLHQQELSEMKHNLELTMAEMRQSLEQERDRLIAEVKKQLELEKQQAVDETKKKQW 976
Query: 504 CVNCGREAMSECTGCHKVNYCSTFCQRKDWKDHQHICGQSAAVTVQADEVHVAESVMEK 562
C NC +EA+ C C +YC CQ+ W +H C QSA Q + V + K
Sbjct: 977 CANCKKEAIFYC--CWNTSYCDYPCQQAHWPEHMKSCTQSATAPQQEADAEVNTETLNK 1033
>gi|34335262 zinc finger, MYND-type containing 8 isoform a [Homo
sapiens]
Length = 1188
Score = 54.3 bits (129), Expect = 3e-07
Identities = 33/119 (27%), Positives = 54/119 (45%), Gaps = 7/119 (5%)
Query: 449 EPRSWLY---LEEMVNSLLNTAQQLKTLFEQAKHA--STYREAATNQAKIHADAERKEQS 503
E WL+ L EM ++L T +++ EQ + + ++ + + D +K+Q
Sbjct: 942 EKLQWLHQQELSEMKHNLELTMAEMRQSLEQERDRLIAEVKKQLELEKQQAVDETKKKQW 1001
Query: 504 CVNCGREAMSECTGCHKVNYCSTFCQRKDWKDHQHICGQSAAVTVQADEVHVAESVMEK 562
C NC +EA+ C C +YC CQ+ W +H C QSA Q + V + K
Sbjct: 1002 CANCKKEAIFYC--CWNTSYCDYPCQQAHWPEHMKSCTQSATAPQQEADAEVNTETLNK 1058
>gi|34335266 zinc finger, MYND-type containing 8 isoform b [Homo
sapiens]
Length = 1160
Score = 54.3 bits (129), Expect = 3e-07
Identities = 33/119 (27%), Positives = 54/119 (45%), Gaps = 7/119 (5%)
Query: 449 EPRSWLY---LEEMVNSLLNTAQQLKTLFEQAKHA--STYREAATNQAKIHADAERKEQS 503
E WL+ L EM ++L T +++ EQ + + ++ + + D +K+Q
Sbjct: 942 EKLQWLHQQELSEMKHNLELTMAEMRQSLEQERDRLIAEVKKQLELEKQQAVDETKKKQW 1001
Query: 504 CVNCGREAMSECTGCHKVNYCSTFCQRKDWKDHQHICGQSAAVTVQADEVHVAESVMEK 562
C NC +EA+ C C +YC CQ+ W +H C QSA Q + V + K
Sbjct: 1002 CANCKKEAIFYC--CWNTSYCDYPCQQAHWPEHMKSCTQSATAPQQEADAEVNTETLNK 1058
>gi|6912568 glucocorticoid modulatory element binding protein 2
[Homo sapiens]
Length = 530
Score = 50.1 bits (118), Expect = 6e-06
Identities = 39/128 (30%), Positives = 62/128 (48%), Gaps = 11/128 (8%)
Query: 204 PVRCRNISGTL-YKNRLGSGGRGRCIKQGENWYSPTEFEAMAGRASSKDWKRSIRYAGRP 262
P+ C + L ++ + G +C++ E+ SP EF +AG+++ KDWKR+IR G
Sbjct: 93 PITCGDSRANLIWRKFVCPGINVKCVQYDEHVISPKEFVHLAGKSTLKDWKRAIRMNGIM 152
Query: 263 LQCLIQDGILNPHAASCTCAACC--DDMTLSGP-VRLFVPYKRRKKENELPTTPVKKD-- 317
L+ ++ G L+ + C+ C + LSG V L P +P TP D
Sbjct: 153 LRKIMDSGELDFYQHDKVCSNTCRSTKIDLSGARVSLSSP----TSAEYIPLTPAAADVN 208
Query: 318 -SPKNITL 324
SP IT+
Sbjct: 209 GSPATITI 216
>gi|13435377 glucocorticoid modulatory element binding protein 1
isoform 1 [Homo sapiens]
Length = 573
Score = 45.8 bits (107), Expect = 1e-04
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 204 PVRCRNISGTL-YKNRLGSGGRGRCIKQGENWYSPTEFEAMAGRASSKDWKRSIRYAGRP 262
P+ C L +K + G +C+K + SP F +AG+++ KDWKR+IR G
Sbjct: 96 PITCGESKAILLWKKFVCPGINVKCVKFNDQLISPKHFVHLAGKSTLKDWKRAIRLGGIM 155
Query: 263 LQCLIQDGILNPHAASCTCAACC 285
L+ ++ G ++ + C+ C
Sbjct: 156 LRKMMDSGQIDFYQHDKVCSNTC 178
>gi|13435375 glucocorticoid modulatory element binding protein 1
isoform 2 [Homo sapiens]
Length = 563
Score = 45.8 bits (107), Expect = 1e-04
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 204 PVRCRNISGTL-YKNRLGSGGRGRCIKQGENWYSPTEFEAMAGRASSKDWKRSIRYAGRP 262
P+ C L +K + G +C+K + SP F +AG+++ KDWKR+IR G
Sbjct: 86 PITCGESKAILLWKKFVCPGINVKCVKFNDQLISPKHFVHLAGKSTLKDWKRAIRLGGIM 145
Query: 263 LQCLIQDGILNPHAASCTCAACC 285
L+ ++ G ++ + C+ C
Sbjct: 146 LRKMMDSGQIDFYQHDKVCSNTC 168
>gi|38505161 tudor domain containing 1 [Homo sapiens]
Length = 1189
Score = 45.4 bits (106), Expect = 1e-04
Identities = 16/41 (39%), Positives = 22/41 (53%)
Query: 500 KEQSCVNCGREAMSECTGCHKVNYCSTFCQRKDWKDHQHIC 540
+ +C CG C+ C + YCST CQR+DW H +C
Sbjct: 166 RSTTCHRCGLFGSLRCSQCKQTYYCSTACQRRDWSAHSIVC 206
>gi|57529246 ubiquitin thioesterase 19 [Homo sapiens]
Length = 1318
Score = 45.1 bits (105), Expect = 2e-04
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 4/46 (8%)
Query: 495 ADAERKEQSCVNCGREAMSECTGCHKVNYCSTFCQRKDWKDHQHIC 540
A +RK+QS E + CT C++V YC+ CQ+ W DH+ +C
Sbjct: 792 AACQRKQQS----EDEKLKRCTRCYRVGYCNQLCQKTHWPDHKGLC 833
>gi|238814389 zinc finger, MYND domain containing 11 isoform a [Homo
sapiens]
Length = 602
Score = 42.4 bits (98), Expect = 0.001
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 10/67 (14%)
Query: 475 EQAKHASTYREAATNQAKIHADAERKEQSCVNCGREAMSECTGCHKVNYCSTFCQRKDW- 533
E+ K +T + +Q K K+Q C NC EAM C C +YCS CQ++ W
Sbjct: 541 EEIKKLATQHKQLISQTK-------KKQWCYNCEEEAMYHC--CWNTSYCSIKCQQEHWH 591
Query: 534 KDHQHIC 540
+H+ C
Sbjct: 592 AEHKRTC 598
>gi|238814385 zinc finger, MYND domain containing 11 isoform a [Homo
sapiens]
Length = 602
Score = 42.4 bits (98), Expect = 0.001
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 10/67 (14%)
Query: 475 EQAKHASTYREAATNQAKIHADAERKEQSCVNCGREAMSECTGCHKVNYCSTFCQRKDW- 533
E+ K +T + +Q K K+Q C NC EAM C C +YCS CQ++ W
Sbjct: 541 EEIKKLATQHKQLISQTK-------KKQWCYNCEEEAMYHC--CWNTSYCSIKCQQEHWH 591
Query: 534 KDHQHIC 540
+H+ C
Sbjct: 592 AEHKRTC 598
>gi|24497554 homeobox A13 [Homo sapiens]
Length = 388
Score = 42.0 bits (97), Expect = 0.001
Identities = 45/140 (32%), Positives = 55/140 (39%), Gaps = 19/140 (13%)
Query: 15 EAAAVAAAAAVAAAAAAAAGGEAEEPVLSRDEDSEEDADSEAERETPRVTAVAVMAAEPG 74
E AA AAAAA AAAAA A GG P + + A + A + A P
Sbjct: 36 EGAAAAAAAAAAAAAAGAGGGGFPHPAAAAAGGNFSVAAAAAAAAAAAANQCRNLMAHPA 95
Query: 75 HMDMGA---------EALPGPDEAAAAAAFAEVTTVTVANVG-------AAADNVFTTSV 118
+ GA EA P AAAAAA A ++ G A A+ S
Sbjct: 96 PLAPGAASAYSSAPGEAPPSAAAAAAAAAAAAAAAAAASSSGGPGPAGPAGAEAAKQCSP 155
Query: 119 ANAASISGHVLSGRTALQIG 138
+AA+ S SG AL G
Sbjct: 156 CSAAAQSS---SGPAALPYG 172
Score = 35.4 bits (80), Expect = 0.14
Identities = 32/102 (31%), Positives = 45/102 (44%), Gaps = 28/102 (27%)
Query: 14 AEAAAVAAAAAVAAAAAAAAGGEAEEPVLSRDEDSEEDADSEAERETPRVTAVAVMAAEP 73
A AAA AAAAA AAAAA+++GG A +EA ++ +A A ++ P
Sbjct: 117 AAAAAAAAAAAAAAAAASSSGGPG----------PAGPAGAEAAKQCSPCSAAAQSSSGP 166
Query: 74 GHMDMG------------------AEALPGPDEAAAAAAFAE 97
+ G ++ P AAAAAAFA+
Sbjct: 167 AALPYGYFGSGYYPCARMGPHPNAIKSCAQPASAAAAAAFAD 208
>gi|13489073 egl nine homolog 1 [Homo sapiens]
Length = 426
Score = 41.2 bits (95), Expect = 0.003
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 497 AERKEQSCVNCGR-EAMSECTGCHKVNYCSTFCQRKDWKDHQHIC 540
+ER Q C CG+ E + C+ C YC QR+DWK H+ +C
Sbjct: 14 SERDRQYCELCGKMENLLRCSRCRSSFYCCKEHQRQDWKKHKLVC 58
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.126 0.369
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,930,879
Number of Sequences: 37866
Number of extensions: 1259742
Number of successful extensions: 12561
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 137
Number of HSP's successfully gapped in prelim test: 270
Number of HSP's that attempted gapping in prelim test: 10193
Number of HSP's gapped (non-prelim): 2017
length of query: 565
length of database: 18,247,518
effective HSP length: 108
effective length of query: 457
effective length of database: 14,157,990
effective search space: 6470201430
effective search space used: 6470201430
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.