Guide to the Human Genome
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Name: GMEB1 Sequence: fasta or formatted (573aa) NCBI GI: 13435377
Description:

glucocorticoid modulatory element binding protein 1 isoform 1

Not currently referenced in the text

Other entries for this name:
alt prot {563aa} glucocorticoid modulatory element binding protein 1 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         37           2
 C cysteine            1.0          6           1
 D aspartate           4.7         27           1
 E glutamate           9.1         52           2
 F phenylalanine       2.4         14           1
 G glycine             5.8         33           2
 H histidine           2.3         13           1
 I isoleucine          6.1         35           2
 K lysine              4.9         28           2
 L leucine             7.3         42           2
 M methionine          3.0         17           2
 N asparagine          3.5         20           2
 P proline             5.8         33           2
 Q glutamine           6.6         38           2
 R arginine            3.0         17           2
 S serine              8.0         46           3
 T threonine           8.4         48           2
 V valine              9.9         57           4
 W tryptophan          0.7          4           1
 Y tyrosine            1.0          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   glucocorticoid modulatory element binding protein 1 ... 
GMEB1                 0.972   glucocorticoid modulatory element binding protein 1 ...
GMEB2                 0.302   glucocorticoid modulatory element binding protein 2 [...
MUC17                 0.025   mucin 17 
SP110                 0.022   SP110 nuclear body protein isoform a 
SP110                 0.022   SP110 nuclear body protein isoform c 
SP110                 0.021   SP110 nuclear body protein isoform b 
SP140                 0.021   SP140 nuclear body protein isoform 1 
MUC2                  0.020   mucin 2 precursor 
DEAF1                 0.019   deformed epidermal autoregulatory factor 1 
LOC100294236          0.018   PREDICTED: similar to diffuse panbronchiolitis crit...
SP100                 0.018   nuclear antigen Sp100 isoform 1 
SP100                 0.018   nuclear antigen Sp100 isoform 2 
SP140L                0.017   SP140 nuclear body protein-like 
NACA                  0.015   nascent polypeptide-associated complex alpha subuni...
MED15                 0.015   mediator complex subunit 15 isoform b 
LOC100294420          0.014   PREDICTED: similar to mucin 2 
FOXK2                 0.014   forkhead box K2 
UBN2                  0.013   ubinuclein 2 
MUC6                  0.013   mucin 6, gastric 
ARID2                 0.013   AT rich interactive domain 2 (ARID, RFX-like) 
LOC100131514          0.013   PREDICTED: similar to hCG1747327, partial 
PHACTR2               0.013   phosphatase and actin regulator 2 isoform 3 
PHACTR2               0.013   phosphatase and actin regulator 2 isoform 1 
PRDM2                 0.013   retinoblastoma protein-binding zinc finger protein i...
PRDM2                 0.013   retinoblastoma protein-binding zinc finger protein i...
PRDM2                 0.013   retinoblastoma protein-binding zinc finger protein i...
MED15                 0.013   mediator complex subunit 15 isoform a 
PNN                   0.013   pinin, desmosome associated protein 
MAGEC1                0.012   melanoma antigen family C, 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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