Guide to the Human Genome
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Name: MLF1IP Sequence: fasta or formatted (418aa) NCBI GI: 38016935
Description:

MLF1 interacting protein

Referenced in:

Centromere Proteins
p53 Pathway

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         24           2
 C cysteine            1.0          4           1
 D aspartate           5.5         23           2
 E glutamate          10.3         43           3
 F phenylalanine       2.2          9           1
 G glycine             3.6         15           1
 H histidine           2.6         11           1
 I isoleucine          5.5         23           1
 K lysine             11.7         49           2
 L leucine             8.1         34           2
 M methionine          1.7          7           1
 N asparagine          3.3         14           1
 P proline             4.5         19           2
 Q glutamine           4.8         20           2
 R arginine            6.7         28           3
 S serine             11.7         49           3
 T threonine           5.3         22           2
 V valine              3.6         15           1
 W tryptophan          0.2          1           1
 Y tyrosine            1.9          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   MLF1 interacting protein 
EIF5B                 0.028   eukaryotic translation initiation factor 5B 
GCC2                  0.028   GRIP and coiled-coil domain-containing 2 
SMC1B                 0.025   SMC1 structural maintenance of chromosomes 1-like 2 ...
KIF21A                0.024   kinesin family member 21A 
TRIP11                0.024   thyroid hormone receptor interactor 11 
C14orf145             0.023   hypothetical protein LOC145508 
NEFH                  0.023   neurofilament, heavy polypeptide 200kDa 
PPHLN1                0.021   periphilin 1 isoform 7 
SLTM                  0.021   modulator of estrogen induced transcription isoform ...
SLTM                  0.021   modulator of estrogen induced transcription isoform ...
ANKRD20A5             0.020   PREDICTED: ankyrin repeat domain 20 family, member ...
ANKRD20A5             0.020   PREDICTED: ankyrin repeat domain 20 family, member ...
CYLC1                 0.020   cylicin, basic protein of sperm head cytoskeleton 1...
MYH11                 0.020   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.020   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.020   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH11                 0.020   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
SMC1A                 0.020   structural maintenance of chromosomes 1A 
CEP152                0.020   centrosomal protein 152kDa 
DMP1                  0.020   dentin matrix acidic phosphoprotein 1 isoform 1 precu...
DMP1                  0.020   dentin matrix acidic phosphoprotein 1 isoform 2 pre...
CEP250                0.020   centrosomal protein 2 
DSPP                  0.020   dentin sialophosphoprotein preproprotein 
SMC2                  0.020   structural maintenance of chromosomes 2 
SMC2                  0.020   structural maintenance of chromosomes 2 
SMC2                  0.020   structural maintenance of chromosomes 2 
TPR                   0.019   nuclear pore complex-associated protein TPR 
CENPF                 0.019   centromere protein F 
GOLGB1                0.019   golgi autoantigen, golgin subfamily b, macrogolgin ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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