Guide to the Human Genome
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Name: ETAA1 Sequence: fasta or formatted (926aa) NCBI GI: 37059814
Description:

ETAA16 protein

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.1         47           2
 C cysteine            2.1         19           1
 D aspartate           5.7         53           3
 E glutamate           7.1         66           4
 F phenylalanine       2.9         27           2
 G glycine             3.6         33           1
 H histidine           1.3         12           1
 I isoleucine          5.8         54           2
 K lysine              9.3         86           3
 L leucine             6.2         57           2
 M methionine          2.3         21           1
 N asparagine          8.2         76           3
 P proline             4.6         43           2
 Q glutamine           5.8         54           3
 R arginine            3.8         35           3
 S serine             12.0        111           3
 T threonine           8.0         74           2
 V valine              4.0         37           2
 W tryptophan          0.9          8           1
 Y tyrosine            1.4         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ETAA16 protein 
DSPP                  0.016   dentin sialophosphoprotein preproprotein 
MUC16                 0.010   mucin 16 
PHF3                  0.009   PHD finger protein 3 
CYLC1                 0.007   cylicin, basic protein of sperm head cytoskeleton 1...
NUMA1                 0.007   nuclear mitotic apparatus protein 1 
EIF5B                 0.007   eukaryotic translation initiation factor 5B 
LOC100294236          0.006   PREDICTED: similar to diffuse panbronchiolitis crit...
NOL8                  0.006   nucleolar protein 8 
DNTTIP2               0.005   deoxynucleotidyltransferase, terminal, interacting p...
IFI16                 0.005   interferon, gamma-inducible protein 16 
FAM190B               0.005   granule cell antiserum positive 14 
KIAA1529              0.005   hypothetical protein LOC57653 
COBL                  0.005   cordon-bleu homolog 
CCDC66                0.005   coiled-coil domain containing 66 isoform 1 
CCDC66                0.005   coiled-coil domain containing 66 isoform 2 
KIN                   0.005   HsKin17 protein 
AZI1                  0.005   5-azacytidine induced 1 isoform b 
AZI1                  0.005   5-azacytidine induced 1 isoform a 
TNRC6C                0.005   trinucleotide repeat containing 6C isoform 1 
TNRC6C                0.005   trinucleotide repeat containing 6C isoform 2 
CENPC1                0.005   centromere protein C 1 
AFF1                  0.005   myeloid/lymphoid or mixed-lineage leukemia trithorax ...
ASXL3                 0.005   additional sex combs like 3 
TNRC6B                0.004   trinucleotide repeat containing 6B isoform 2 
TNRC6B                0.004   trinucleotide repeat containing 6B isoform 1 
PCLO                  0.004   piccolo isoform 2 
PCLO                  0.004   piccolo isoform 1 
CTR9                  0.004   SH2 domain binding protein 1 
SRRM2                 0.004   splicing coactivator subunit SRm300 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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