Guide to the Human Genome
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Name: ZBTB40 Sequence: fasta or formatted (1239aa) NCBI GI: 139394579
Description:

zinc finger and BTB domain containing 40

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt mRNA [1239aa] zinc finger and BTB domain containing 40
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.3         90           3
 C cysteine            3.8         47           2
 D aspartate           3.7         46           2
 E glutamate           9.6        119           3
 F phenylalanine       3.9         48           2
 G glycine             4.6         57           2
 H histidine           4.4         55           2
 I isoleucine          3.4         42           2
 K lysine              7.8         97           5
 L leucine             9.9        123           3
 M methionine          2.1         26           2
 N asparagine          2.3         29           2
 P proline             5.1         63           1
 Q glutamine           5.6         69           2
 R arginine            3.4         42           2
 S serine              8.1        100           2
 T threonine           7.3         90           2
 V valine              5.7         71           2
 W tryptophan          0.2          3           1
 Y tyrosine            1.8         22           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger and BTB domain containing 40 
ZBTB40                1.000   zinc finger and BTB domain containing 40 
ZNF699                0.091   zinc finger protein 699 
ZNF726                0.087   PREDICTED: zinc finger protein 726 
ZNF726                0.087   PREDICTED: zinc finger protein 726 
ZNF726                0.087   PREDICTED: zinc finger protein 726 
ZNF208                0.086   zinc finger protein 208 
ZNF85                 0.086   zinc finger protein 85 
ZNF91                 0.085   zinc finger protein 91 
ZNF433                0.085   zinc finger protein 433 
ZNF226                0.084   zinc finger protein 226 isoform a 
ZNF226                0.084   zinc finger protein 226 isoform a 
ZNF836                0.084   zinc finger protein 836 
ZNF43                 0.084   zinc finger protein 43 
LOC388559             0.084   PREDICTED: similar to hCG1778601 isoform 1 
LOC388559             0.084   PREDICTED: similar to hCG1778601 isoform 1 
LOC388559             0.084   PREDICTED: hypothetical protein LOC388559 
ZNF791                0.084   zinc finger protein 791 
ZNF317                0.084   zinc finger protein 317 
ZNF16                 0.084   zinc finger protein 16 
ZNF16                 0.084   zinc finger protein 16 
ZNF709                0.083   zinc finger protein 709 isoform b 
LOC100292052          0.083   PREDICTED: similar to hCG1773661 
LOC100287226          0.083   PREDICTED: similar to hCG1773661 
LOC100287226          0.083   PREDICTED: hypothetical protein XP_002343677 
ZNF709                0.083   zinc finger protein 709 isoform a 
ZNF184                0.083   zinc finger protein 184 
ZNF778                0.083   zinc finger protein 778 
ZNF160                0.082   zinc finger protein 160 
ZNF160                0.082   zinc finger protein 160 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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