Guide to the Human Genome
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Name: ZNF275 Sequence: fasta or formatted (429aa) NCBI GI: 221307573
Description:

zinc finger protein 275

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         28           2
 C cysteine            5.6         24           1
 D aspartate           3.5         15           2
 E glutamate           7.9         34           2
 F phenylalanine       4.7         20           1
 G glycine             8.2         35           1
 H histidine           7.5         32           2
 I isoleucine          1.6          7           1
 K lysine              7.5         32           2
 L leucine             6.8         29           2
 M methionine          1.4          6           2
 N asparagine          1.9          8           1
 P proline             6.3         27           1
 Q glutamine           4.9         21           1
 R arginine            9.6         41           2
 S serine              8.6         37           3
 T threonine           2.6         11           1
 V valine              3.7         16           1
 W tryptophan          0.2          1           1
 Y tyrosine            1.2          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 275 
ZNF135                0.387   zinc finger protein 135 
ZNF132                0.380   zinc finger protein 132 
ZNF16                 0.373   zinc finger protein 16 
ZNF16                 0.373   zinc finger protein 16 
ZNF551                0.368   zinc finger protein 551 
ZNF502                0.367   zinc finger protein 502 
ZNF502                0.367   zinc finger protein 502 
ZNF502                0.367   zinc finger protein 502 
ZNF502                0.367   zinc finger protein 502 
ZNF420                0.365   zinc finger protein 420 
ZNF30                 0.363   zinc finger protein 30 isoform b 
ZNF30                 0.363   zinc finger protein 30 isoform a 
ZNF30                 0.363   zinc finger protein 30 isoform a 
ZNF780A               0.361   zinc finger protein 780A isoform b 
ZNF780A               0.361   zinc finger protein 780A isoform b 
ZNF780A               0.361   zinc finger protein 780A isoform a 
ZNF345                0.361   zinc finger protein 345 
ZNF548                0.360   zinc finger protein 548 
ZNF383                0.359   zinc finger protein 383 
ZNF546                0.357   zinc finger protein 546 
ZFP3                  0.357   zinc finger protein-3 
ZNF33B                0.357   zinc finger protein 33B 
ZNF418                0.357   zinc finger protein 418 
ZNF678                0.357   zinc finger protein 678 
ZNF429                0.356   zinc finger protein 429 
ZFP2                  0.356   zinc finger protein 2 homolog 
ZNF17                 0.356   zinc finger protein 17 
ZNF331                0.356   zinc finger protein 331 
ZNF331                0.356   zinc finger protein 331 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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