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Search of human proteins with 33598922
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|33598922 scavenger receptor class A, member 3 isoform 2
[Homo sapiens]
(466 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|33598922 scavenger receptor class A, member 3 isoform 2 [Homo... 919 0.0
gi|33598924 scavenger receptor class A, member 3 isoform 1 [Homo... 900 0.0
gi|18641360 collectin sub-family member 12 [Homo sapiens] 196 3e-50
gi|23097308 spectrin repeat containing, nuclear envelope 1 isofo... 51 3e-06
gi|154277116 spectrin repeat containing, nuclear envelope 1 isof... 51 3e-06
gi|154350244 hypothetical protein LOC79632 isoform 2 [Homo sapiens] 42 0.001
gi|154350226 hypothetical protein LOC79632 isoform 1 [Homo sapiens] 42 0.001
gi|118498356 kinectin 1 isoform a [Homo sapiens] 42 0.001
gi|118498368 kinectin 1 isoform c [Homo sapiens] 42 0.001
gi|33620775 kinectin 1 isoform a [Homo sapiens] 42 0.001
gi|118498362 kinectin 1 isoform b [Homo sapiens] 41 0.002
gi|153791670 keratin 76 [Homo sapiens] 40 0.003
gi|150010558 myosin, heavy polypeptide 15 [Homo sapiens] 40 0.006
gi|151101140 coiled-coil domain containing 2 isoform a [Homo sap... 39 0.008
gi|151105223 coiled-coil domain containing 2 isoform a [Homo sap... 39 0.008
gi|151105229 coiled-coil domain containing 2 isoform a [Homo sap... 39 0.008
gi|4758650 kinesin family member 5C [Homo sapiens] 39 0.013
gi|110624781 myosin, heavy polypeptide 13, skeletal muscle [Homo... 38 0.017
gi|62243484 sarcoma antigen NY-SAR-41 [Homo sapiens] 38 0.022
gi|4758648 kinesin family member 5B [Homo sapiens] 37 0.038
gi|109148552 keratin 3 [Homo sapiens] 37 0.038
gi|24430183 outer dense fiber of sperm tails 2 isoform 2 [Homo s... 36 0.065
gi|24430181 outer dense fiber of sperm tails 2 isoform 1 [Homo s... 36 0.065
gi|55770834 centromere protein F [Homo sapiens] 36 0.065
gi|55770888 early endosome antigen 1, 162kD [Homo sapiens] 36 0.085
gi|154354990 ankyrin repeat domain 26 [Homo sapiens] 36 0.085
gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens] 35 0.11
gi|31563507 GRIP and coiled-coil domain-containing 2 [Homo sapiens] 35 0.15
gi|153945790 myosin, heavy chain 8, skeletal muscle, perinatal [... 34 0.25
gi|58530840 desmoplakin isoform I [Homo sapiens] 34 0.32
>gi|33598922 scavenger receptor class A, member 3 isoform 2 [Homo
sapiens]
Length = 466
Score = 919 bits (2376), Expect = 0.0
Identities = 466/466 (100%), Positives = 466/466 (100%)
Query: 1 MKVRSAGGDGDALCVTEEDLAGDDEDMPTFPCTQKGRPGPRCSRCQKNLSLHTSVRILYL 60
MKVRSAGGDGDALCVTEEDLAGDDEDMPTFPCTQKGRPGPRCSRCQKNLSLHTSVRILYL
Sbjct: 1 MKVRSAGGDGDALCVTEEDLAGDDEDMPTFPCTQKGRPGPRCSRCQKNLSLHTSVRILYL 60
Query: 61 FLALLLVAVAVLASLVFRKVDSLSEDISLTQSIYDKKLVLMQKNLQGLDPKALNNCSFCH 120
FLALLLVAVAVLASLVFRKVDSLSEDISLTQSIYDKKLVLMQKNLQGLDPKALNNCSFCH
Sbjct: 61 FLALLLVAVAVLASLVFRKVDSLSEDISLTQSIYDKKLVLMQKNLQGLDPKALNNCSFCH 120
Query: 121 EAGQLGPEIRKLQEELEGIQKLLLAQEVQLDQTLQAQEVLSTTSRQISQEMGSCSFSIHQ 180
EAGQLGPEIRKLQEELEGIQKLLLAQEVQLDQTLQAQEVLSTTSRQISQEMGSCSFSIHQ
Sbjct: 121 EAGQLGPEIRKLQEELEGIQKLLLAQEVQLDQTLQAQEVLSTTSRQISQEMGSCSFSIHQ 180
Query: 181 VNQSLGLFLAQVRGWQATTAGLDLSLKDLTQECYDVKAAVHQINFTVGQTSEWIHGIQRK 240
VNQSLGLFLAQVRGWQATTAGLDLSLKDLTQECYDVKAAVHQINFTVGQTSEWIHGIQRK
Sbjct: 181 VNQSLGLFLAQVRGWQATTAGLDLSLKDLTQECYDVKAAVHQINFTVGQTSEWIHGIQRK 240
Query: 241 TDEETLTLQKIVTDWQNYTRLFSGLRTTSTKTGEAVKNIQATLGASSQRISQNSESMHDL 300
TDEETLTLQKIVTDWQNYTRLFSGLRTTSTKTGEAVKNIQATLGASSQRISQNSESMHDL
Sbjct: 241 TDEETLTLQKIVTDWQNYTRLFSGLRTTSTKTGEAVKNIQATLGASSQRISQNSESMHDL 300
Query: 301 VLQVMGLQLQLDNISSFLDDHEENMHDLQYHTHYAQNRTVERFESLEGRMASHEIEIGTI 360
VLQVMGLQLQLDNISSFLDDHEENMHDLQYHTHYAQNRTVERFESLEGRMASHEIEIGTI
Sbjct: 301 VLQVMGLQLQLDNISSFLDDHEENMHDLQYHTHYAQNRTVERFESLEGRMASHEIEIGTI 360
Query: 361 FTNINATDNHVHSMLKYLDDVRLSCTLGFHTHAEELYYLNKSVSIMLGTTDLLRERFSLL 420
FTNINATDNHVHSMLKYLDDVRLSCTLGFHTHAEELYYLNKSVSIMLGTTDLLRERFSLL
Sbjct: 361 FTNINATDNHVHSMLKYLDDVRLSCTLGFHTHAEELYYLNKSVSIMLGTTDLLRERFSLL 420
Query: 421 SARLDLNVRNLSMIVEEMKAVDTQHGEILRNVTILRGHTLFSHNRI 466
SARLDLNVRNLSMIVEEMKAVDTQHGEILRNVTILRGHTLFSHNRI
Sbjct: 421 SARLDLNVRNLSMIVEEMKAVDTQHGEILRNVTILRGHTLFSHNRI 466
>gi|33598924 scavenger receptor class A, member 3 isoform 1 [Homo
sapiens]
Length = 606
Score = 900 bits (2326), Expect = 0.0
Identities = 457/457 (100%), Positives = 457/457 (100%)
Query: 1 MKVRSAGGDGDALCVTEEDLAGDDEDMPTFPCTQKGRPGPRCSRCQKNLSLHTSVRILYL 60
MKVRSAGGDGDALCVTEEDLAGDDEDMPTFPCTQKGRPGPRCSRCQKNLSLHTSVRILYL
Sbjct: 1 MKVRSAGGDGDALCVTEEDLAGDDEDMPTFPCTQKGRPGPRCSRCQKNLSLHTSVRILYL 60
Query: 61 FLALLLVAVAVLASLVFRKVDSLSEDISLTQSIYDKKLVLMQKNLQGLDPKALNNCSFCH 120
FLALLLVAVAVLASLVFRKVDSLSEDISLTQSIYDKKLVLMQKNLQGLDPKALNNCSFCH
Sbjct: 61 FLALLLVAVAVLASLVFRKVDSLSEDISLTQSIYDKKLVLMQKNLQGLDPKALNNCSFCH 120
Query: 121 EAGQLGPEIRKLQEELEGIQKLLLAQEVQLDQTLQAQEVLSTTSRQISQEMGSCSFSIHQ 180
EAGQLGPEIRKLQEELEGIQKLLLAQEVQLDQTLQAQEVLSTTSRQISQEMGSCSFSIHQ
Sbjct: 121 EAGQLGPEIRKLQEELEGIQKLLLAQEVQLDQTLQAQEVLSTTSRQISQEMGSCSFSIHQ 180
Query: 181 VNQSLGLFLAQVRGWQATTAGLDLSLKDLTQECYDVKAAVHQINFTVGQTSEWIHGIQRK 240
VNQSLGLFLAQVRGWQATTAGLDLSLKDLTQECYDVKAAVHQINFTVGQTSEWIHGIQRK
Sbjct: 181 VNQSLGLFLAQVRGWQATTAGLDLSLKDLTQECYDVKAAVHQINFTVGQTSEWIHGIQRK 240
Query: 241 TDEETLTLQKIVTDWQNYTRLFSGLRTTSTKTGEAVKNIQATLGASSQRISQNSESMHDL 300
TDEETLTLQKIVTDWQNYTRLFSGLRTTSTKTGEAVKNIQATLGASSQRISQNSESMHDL
Sbjct: 241 TDEETLTLQKIVTDWQNYTRLFSGLRTTSTKTGEAVKNIQATLGASSQRISQNSESMHDL 300
Query: 301 VLQVMGLQLQLDNISSFLDDHEENMHDLQYHTHYAQNRTVERFESLEGRMASHEIEIGTI 360
VLQVMGLQLQLDNISSFLDDHEENMHDLQYHTHYAQNRTVERFESLEGRMASHEIEIGTI
Sbjct: 301 VLQVMGLQLQLDNISSFLDDHEENMHDLQYHTHYAQNRTVERFESLEGRMASHEIEIGTI 360
Query: 361 FTNINATDNHVHSMLKYLDDVRLSCTLGFHTHAEELYYLNKSVSIMLGTTDLLRERFSLL 420
FTNINATDNHVHSMLKYLDDVRLSCTLGFHTHAEELYYLNKSVSIMLGTTDLLRERFSLL
Sbjct: 361 FTNINATDNHVHSMLKYLDDVRLSCTLGFHTHAEELYYLNKSVSIMLGTTDLLRERFSLL 420
Query: 421 SARLDLNVRNLSMIVEEMKAVDTQHGEILRNVTILRG 457
SARLDLNVRNLSMIVEEMKAVDTQHGEILRNVTILRG
Sbjct: 421 SARLDLNVRNLSMIVEEMKAVDTQHGEILRNVTILRG 457
>gi|18641360 collectin sub-family member 12 [Homo sapiens]
Length = 742
Score = 196 bits (499), Expect = 3e-50
Identities = 125/442 (28%), Positives = 236/442 (53%), Gaps = 2/442 (0%)
Query: 18 EDLAGDDEDMPTFPCTQKG-RPGPRCSRCQKNLSLHTSVRILYLFLALLLVAVAVLASLV 76
+D ++E++ +F + G + G +C++C+ N +L S+ +LY+ ALL + VA+L V
Sbjct: 2 KDDFAEEEEVQSFGYKRFGIQEGTQCTKCKNNWALKFSIILLYILCALLTITVAILGYKV 61
Query: 77 FRKVDSLSEDISLTQSIYDKKLVLMQKNLQGL-DPKALNNCSFCHEAGQLGPEIRKLQEE 135
K+D+++ + ++ YD KL ++ +L+ L D S E +I L+++
Sbjct: 62 VEKMDNVTGGMETSRQTYDDKLTAVESDLKKLGDQTGKKAISTNSELSTFRSDILDLRQQ 121
Query: 136 LEGIQKLLLAQEVQLDQTLQAQEVLSTTSRQISQEMGSCSFSIHQVNQSLGLFLAQVRGW 195
L I + + L++ + + L Q+ + + + SF I VN++L + V
Sbjct: 122 LREITEKTSKNKDTLEKLQASGDALVDRQSQLKETLENNSFLITTVNKTLQAYNGYVTNL 181
Query: 196 QATTAGLDLSLKDLTQECYDVKAAVHQINFTVGQTSEWIHGIQRKTDEETLTLQKIVTDW 255
Q T+ L +L++ V ++ +N T Q I +QR D+ + +Q+I D+
Sbjct: 182 QQDTSVLQGNLQNQMYSHNVVIMNLNNLNLTQVQQRNLITNLQRSVDDTSQAIQRIKNDF 241
Query: 256 QNYTRLFSGLRTTSTKTGEAVKNIQATLGASSQRISQNSESMHDLVLQVMGLQLQLDNIS 315
QN ++F + + E V+++Q +S N++++ D+ Q+ Q++NI+
Sbjct: 242 QNLQQVFLQAKKDTDWLKEKVQSLQTLAANNSALAKANNDTLEDMNSQLNSFTGQMENIT 301
Query: 316 SFLDDHEENMHDLQYHTHYAQNRTVERFESLEGRMASHEIEIGTIFTNINATDNHVHSML 375
+ +E+N+ DLQ A+NRT +F LE R E +I I +NI+ T +H+ ++
Sbjct: 302 TISQANEQNLKDLQDLHKDAENRTAIKFNQLEERFQLFETDIVNIISNISYTAHHLRTLT 361
Query: 376 KYLDDVRLSCTLGFHTHAEELYYLNKSVSIMLGTTDLLRERFSLLSARLDLNVRNLSMIV 435
L++VR +CT H ++L LN +++ + + LR + L+ +RLD V NLS+I+
Sbjct: 362 SNLNEVRTTCTDTLTKHTDDLTSLNNTLANIRLDSVSLRMQQDLMRSRLDTEVANLSVIM 421
Query: 436 EEMKAVDTQHGEILRNVTILRG 457
EEMK VD++HG++++N TIL+G
Sbjct: 422 EEMKLVDSKHGQLIKNFTILQG 443
>gi|23097308 spectrin repeat containing, nuclear envelope 1 isoform 2
[Homo sapiens]
Length = 8749
Score = 50.8 bits (120), Expect = 3e-06
Identities = 64/336 (19%), Positives = 134/336 (39%), Gaps = 20/336 (5%)
Query: 128 EIRKLQEELEGIQKLLLAQEVQLDQTLQAQEVLSTTSRQISQ---EMGSCS--FSIHQVN 182
E+RKL+ L+G+++ QE ++ TL+ E T + + + GS F
Sbjct: 1320 ELRKLESTLDGLERSRERQERRIQVTLRKWERFETNKETVVRYLFQTGSSHERFLSFSSL 1379
Query: 183 QSLGLFLAQVRGWQATTAGLDLSLKDLTQECYDVKAAVHQINFTVGQTS---EWIHGIQR 239
+SL L Q + + T + + ++L +E ++ Q E + ++
Sbjct: 1380 ESLSSELEQTKEFSKRTESIAVQAENLVKEASEIPLGPQNKQLLQQQAKSIKEQVKKLED 1439
Query: 240 KTDEETLTLQKIVTDWQNYTRLFSGLRTTSTKTGEAVKNIQATLGASSQRISQNSESMHD 299
+E+ T++ + T W ++ F L T+ + + ++ + A +ISQ ++ +
Sbjct: 1440 TLEEDIKTMEMVKTKWDHFGSNFETLSVWITEKEKELNALETSSSAMDMQISQIKVTIQE 1499
Query: 300 L---VLQVMGLQLQLDNISSFLDDHEEN--MHDLQYHTHYAQNRTVERFESLEGRMASHE 354
+ + ++GL+ + + + F+ E L Y + E + LEG + H
Sbjct: 1500 IESKLSSIVGLEEEAQSFAQFVTTGESARIKAKLTQIRRYGEELR-EHAQCLEGTILGHL 1558
Query: 355 IEIGTIFTNINATDNHVHSMLKYLDDVRLSCTLGFHTHAEELYYLNKSVSIMLGTTDLLR 414
+ N+ V + +L+ + + A E Y + + + + L
Sbjct: 1559 SQQQKFEENLRKIQQSVSEF-----EDKLAVPIKICSSATETYKVLQEHMDLCQALESLS 1613
Query: 415 ERFSLLSARLDLNVRNLSMIVEEMKAVDTQHGEILR 450
+ SA V N V+E A+ Q+ +ILR
Sbjct: 1614 SAITAFSASA-RKVVNRDSCVQEAAALQQQYEDILR 1648
Score = 30.8 bits (68), Expect = 2.7
Identities = 26/166 (15%), Positives = 72/166 (43%), Gaps = 22/166 (13%)
Query: 204 LSLKDLTQECYDVKAAVHQINFTVGQTSEWIHGIQRKTDEETLTLQKIVTDWQNYTRLFS 263
++ K T +C+D+ + +++ ++ + E++ + + + L K
Sbjct: 3088 VNAKITTAKCFDIPQNISEVSTSLQKIQEFLSESENGQHKLNMMLSK------------- 3134
Query: 264 GLRTTSTKTGEAVKNIQATLGASSQ-------RISQNSESMHDLVLQVMGLQLQLDNISS 316
G ++ T E K IQA + A+ + + Q ++ +L +Q+ ++ + I
Sbjct: 3135 GELLSTLLTKEKAKGIQAKVTAAKEDWKNFHSNLHQKESALENLKIQMKDFEVSAEPIQD 3194
Query: 317 FLDDHEENMHDLQYHTH--YAQNRTVERFESLEGRMASHEIEIGTI 360
+L E+ +H+ + A+ R ++ +S+ + +E ++ +
Sbjct: 3195 WLSKTEKMVHESSNRLYDLPAKRREQQKLQSVLEEIHCYEPQLNRL 3240
Score = 29.6 bits (65), Expect = 6.1
Identities = 14/70 (20%), Positives = 35/70 (50%)
Query: 85 EDISLTQSIYDKKLVLMQKNLQGLDPKALNNCSFCHEAGQLGPEIRKLQEELEGIQKLLL 144
+++S Q +YD+ ++++ GL+ + L + QE++ G QK+++
Sbjct: 6487 QELSKLQDMYDELMMIIGSRRSGLNQNLTLKSQYERALQDLADLLETGQEKMAGDQKIIV 6546
Query: 145 AQEVQLDQTL 154
+ + ++ Q L
Sbjct: 6547 SSKEEIQQLL 6556
>gi|154277116 spectrin repeat containing, nuclear envelope 1 isoform 1
[Homo sapiens]
Length = 8797
Score = 50.8 bits (120), Expect = 3e-06
Identities = 64/336 (19%), Positives = 134/336 (39%), Gaps = 20/336 (5%)
Query: 128 EIRKLQEELEGIQKLLLAQEVQLDQTLQAQEVLSTTSRQISQ---EMGSCS--FSIHQVN 182
E+RKL+ L+G+++ QE ++ TL+ E T + + + GS F
Sbjct: 1313 ELRKLESTLDGLERSRERQERRIQVTLRKWERFETNKETVVRYLFQTGSSHERFLSFSSL 1372
Query: 183 QSLGLFLAQVRGWQATTAGLDLSLKDLTQECYDVKAAVHQINFTVGQTS---EWIHGIQR 239
+SL L Q + + T + + ++L +E ++ Q E + ++
Sbjct: 1373 ESLSSELEQTKEFSKRTESIAVQAENLVKEASEIPLGPQNKQLLQQQAKSIKEQVKKLED 1432
Query: 240 KTDEETLTLQKIVTDWQNYTRLFSGLRTTSTKTGEAVKNIQATLGASSQRISQNSESMHD 299
+E+ T++ + T W ++ F L T+ + + ++ + A +ISQ ++ +
Sbjct: 1433 TLEEDIKTMEMVKTKWDHFGSNFETLSVWITEKEKELNALETSSSAMDMQISQIKVTIQE 1492
Query: 300 L---VLQVMGLQLQLDNISSFLDDHEEN--MHDLQYHTHYAQNRTVERFESLEGRMASHE 354
+ + ++GL+ + + + F+ E L Y + E + LEG + H
Sbjct: 1493 IESKLSSIVGLEEEAQSFAQFVTTGESARIKAKLTQIRRYGEELR-EHAQCLEGTILGHL 1551
Query: 355 IEIGTIFTNINATDNHVHSMLKYLDDVRLSCTLGFHTHAEELYYLNKSVSIMLGTTDLLR 414
+ N+ V + +L+ + + A E Y + + + + L
Sbjct: 1552 SQQQKFEENLRKIQQSVSEF-----EDKLAVPIKICSSATETYKVLQEHMDLCQALESLS 1606
Query: 415 ERFSLLSARLDLNVRNLSMIVEEMKAVDTQHGEILR 450
+ SA V N V+E A+ Q+ +ILR
Sbjct: 1607 SAITAFSASA-RKVVNRDSCVQEAAALQQQYEDILR 1641
Score = 30.8 bits (68), Expect = 2.7
Identities = 26/166 (15%), Positives = 72/166 (43%), Gaps = 22/166 (13%)
Query: 204 LSLKDLTQECYDVKAAVHQINFTVGQTSEWIHGIQRKTDEETLTLQKIVTDWQNYTRLFS 263
++ K T +C+D+ + +++ ++ + E++ + + + L K
Sbjct: 3081 VNAKITTAKCFDIPQNISEVSTSLQKIQEFLSESENGQHKLNMMLSK------------- 3127
Query: 264 GLRTTSTKTGEAVKNIQATLGASSQ-------RISQNSESMHDLVLQVMGLQLQLDNISS 316
G ++ T E K IQA + A+ + + Q ++ +L +Q+ ++ + I
Sbjct: 3128 GELLSTLLTKEKAKGIQAKVTAAKEDWKNFHSNLHQKESALENLKIQMKDFEVSAEPIQD 3187
Query: 317 FLDDHEENMHDLQYHTH--YAQNRTVERFESLEGRMASHEIEIGTI 360
+L E+ +H+ + A+ R ++ +S+ + +E ++ +
Sbjct: 3188 WLSKTEKMVHESSNRLYDLPAKRREQQKLQSVLEEIHCYEPQLNRL 3233
Score = 29.6 bits (65), Expect = 6.1
Identities = 14/70 (20%), Positives = 35/70 (50%)
Query: 85 EDISLTQSIYDKKLVLMQKNLQGLDPKALNNCSFCHEAGQLGPEIRKLQEELEGIQKLLL 144
+++S Q +YD+ ++++ GL+ + L + QE++ G QK+++
Sbjct: 6558 QELSKLQDMYDELMMIIGSRRSGLNQNLTLKSQYERALQDLADLLETGQEKMAGDQKIIV 6617
Query: 145 AQEVQLDQTL 154
+ + ++ Q L
Sbjct: 6618 SSKEEIQQLL 6627
>gi|154350244 hypothetical protein LOC79632 isoform 2 [Homo sapiens]
Length = 971
Score = 42.4 bits (98), Expect = 0.001
Identities = 52/261 (19%), Positives = 101/261 (38%), Gaps = 29/261 (11%)
Query: 121 EAGQLGPEIRKLQEELEGIQKLLLAQEVQLDQTLQAQEVLSTTSRQISQEMGSCSFSIHQ 180
EAG L + +KLQ L + + + QLD + + L + +++ E+ + + Q
Sbjct: 195 EAGSLLDKCQKLQTALAIAENNVQVLQKQLDDAKEGEMALLSKHKEVESELAAARERLQQ 254
Query: 181 VNQSLGLFLAQVRGWQATTAGLDLSLKDLTQECYDVKAAVHQINFTVGQTSEWIHGIQRK 240
L L + + QAT ++++KDL E V + Q+ + +
Sbjct: 255 QASDLVLKASHIGMLQATQMTQEVTIKDLESEKSRVNERLSQLEEERAFLRSKTQSLDEE 314
Query: 241 TDEETLTLQKIV-----TDWQNYTRLFSGLRT-----------TSTKTGE--------AV 276
++ L L+K V T + Y R L++ +KT E A+
Sbjct: 315 QKQQILELEKKVNEAKRTQQEYYERELKNLQSRLEEEVTQLNEAHSKTLEELAWKHHMAI 374
Query: 277 KNIQATLGASSQRISQNSESMH-----DLVLQVMGLQLQLDNISSFLDDHEENMHDLQYH 331
+ + + +++ + E H +L LQ +L+N+ L+D + H
Sbjct: 375 EAVHSNAIRDKKKLQMDLEEQHNKDKLNLEEDKNQLQQELENLKEVLEDKLNTANQEIGH 434
Query: 332 THYAQNRTVERFESLEGRMAS 352
++ + S EG +AS
Sbjct: 435 LQDMVRKSEQGLGSAEGLIAS 455
>gi|154350226 hypothetical protein LOC79632 isoform 1 [Homo sapiens]
Length = 1140
Score = 42.4 bits (98), Expect = 0.001
Identities = 52/261 (19%), Positives = 101/261 (38%), Gaps = 29/261 (11%)
Query: 121 EAGQLGPEIRKLQEELEGIQKLLLAQEVQLDQTLQAQEVLSTTSRQISQEMGSCSFSIHQ 180
EAG L + +KLQ L + + + QLD + + L + +++ E+ + + Q
Sbjct: 315 EAGSLLDKCQKLQTALAIAENNVQVLQKQLDDAKEGEMALLSKHKEVESELAAARERLQQ 374
Query: 181 VNQSLGLFLAQVRGWQATTAGLDLSLKDLTQECYDVKAAVHQINFTVGQTSEWIHGIQRK 240
L L + + QAT ++++KDL E V + Q+ + +
Sbjct: 375 QASDLVLKASHIGMLQATQMTQEVTIKDLESEKSRVNERLSQLEEERAFLRSKTQSLDEE 434
Query: 241 TDEETLTLQKIV-----TDWQNYTRLFSGLRT-----------TSTKTGE--------AV 276
++ L L+K V T + Y R L++ +KT E A+
Sbjct: 435 QKQQILELEKKVNEAKRTQQEYYERELKNLQSRLEEEVTQLNEAHSKTLEELAWKHHMAI 494
Query: 277 KNIQATLGASSQRISQNSESMH-----DLVLQVMGLQLQLDNISSFLDDHEENMHDLQYH 331
+ + + +++ + E H +L LQ +L+N+ L+D + H
Sbjct: 495 EAVHSNAIRDKKKLQMDLEEQHNKDKLNLEEDKNQLQQELENLKEVLEDKLNTANQEIGH 554
Query: 332 THYAQNRTVERFESLEGRMAS 352
++ + S EG +AS
Sbjct: 555 LQDMVRKSEQGLGSAEGLIAS 575
>gi|118498356 kinectin 1 isoform a [Homo sapiens]
Length = 1357
Score = 42.0 bits (97), Expect = 0.001
Identities = 78/358 (21%), Positives = 136/358 (37%), Gaps = 40/358 (11%)
Query: 64 LLLVAVAVLASLVFRKVDSLSEDISLTQSIY--DKKLVLMQKNLQGLDPKALNNCSFCHE 121
LL V L +L + + E + QS+Y D K+ L+++ LQ HE
Sbjct: 646 LLKAEVQKLQALANEQAAAAHELEKMQQSVYVKDDKIRLLEEQLQ-------------HE 692
Query: 122 AGQLGPEIRKLQEELEGIQKLLLAQEVQLDQTLQAQEVLSTTSRQISQEMGSCSFSIHQV 181
E + L + Q L EVQ QTL +++ Q+ + + + V
Sbjct: 693 ISNKMEEFKILND-----QNKALKSEVQKLQTLVSEQPNKDVVEQMEKCIQEKDEKLKTV 747
Query: 182 NQSLGLFLAQVRGWQATTAGLDLSLKDLTQECYDVKAAVH-QINFT--VGQTSEWIHGIQ 238
+ L L QV + + LT+E D+KA + Q++F V + + IH
Sbjct: 748 EELLETGLIQVATKEEELNAIRTENSSLTKEVQDLKAKQNDQVSFASLVEELKKVIHEKD 807
Query: 239 RKTDEETLTLQKIVTDWQNYTRLFSGLRTTSTKTGEAVKNI------QATLGASSQRISQ 292
K L+ + N + L+ E + N+ Q ++ + Q +
Sbjct: 808 GKIKSVEELLEAELLKVANKEKTVQDLKQEIKALKEEIGNVQLEKAQQLSITSKVQELQN 867
Query: 293 ----NSESMHDLVLQVMGLQLQLDNISSFLDDHEENMHDLQYHT-HYAQNRTVE-----R 342
E M+ + + + L N +L D +E L+ H AQ+ E +
Sbjct: 868 LLKGKEEQMNTMKAVLEEKEKDLANTGKWLQDLQEENESLKAHVQEVAQHNLKEASSASQ 927
Query: 343 FESLEGRMASHEIEIGTIFTNINATDNHVHSMLKYLDDVRLSCTLGFHTHAEELYYLN 400
FE LE + E E+ + + ++ + S + L DV+ L F + E+L N
Sbjct: 928 FEELEIVLKEKENELKRLEAMLKERESDLSSKTQLLQDVQDENKL-FKSQIEQLKQQN 984
Score = 30.4 bits (67), Expect = 3.6
Identities = 55/323 (17%), Positives = 123/323 (38%), Gaps = 38/323 (11%)
Query: 72 LASLVFRKVDSLSEDISLTQSIYDKKLVLMQKNLQGLDPKALNNCSFCHEAGQLGPEIRK 131
L +++ + LS L Q + D+ L + ++ L + S +L I +
Sbjct: 945 LEAMLKERESDLSSKTQLLQDVQDENK-LFKSQIEQLKQQNYQQASSFPPHEELLKVISE 1003
Query: 132 LQEELEGIQKLL--LAQEVQ---------LDQTLQAQEVLSTTSRQISQEMGSCSFSIHQ 180
++E+ G+ L L V+ ++ +A E L++T + + ++ S
Sbjct: 1004 REKEISGLWNELDSLKDAVEHQRKKNNDLREKNWEAMEALASTEKMLQDKVNKTS----- 1058
Query: 181 VNQSLGLFLAQVRGWQATTAGLDLSLKDLTQECYDVKAAVHQINFTVGQTSEWIHGIQRK 240
+ Q ++L K++ ++ + + +++ EW+HG ++K
Sbjct: 1059 ------------KERQQQVEAVELEAKEVLKKLFPKVSVPSNLSY-----GEWLHGFEKK 1101
Query: 241 TDE--ETLTLQKIVTDWQNYTRLFSGLRTTSTKTGEAVKNIQATLGASSQRISQNSESMH 298
E + + V ++ + + T E K++ A Q++ ++ E
Sbjct: 1102 AKECMAGTSGSEEVKVLEHKLKEADEMHTLLQLECEKYKSVLAETEGILQKLQRSVEQEE 1161
Query: 299 D-LVLQVMGLQLQLDNISSFLDDHEENMHDLQYHTHYAQNRTVERFESLEGRMASHEIEI 357
+ ++V + + S E+ + L+ +N ER E LE + E+E
Sbjct: 1162 NKWKVKVDESHKTIKQMQSSFTSSEQELERLRSENKDIENLRRER-EHLEMELEKAEMER 1220
Query: 358 GTIFTNINATDNHVHSMLKYLDD 380
T T + + + + K LDD
Sbjct: 1221 STYVTEVRELKDLLTELQKKLDD 1243
>gi|118498368 kinectin 1 isoform c [Homo sapiens]
Length = 1300
Score = 42.0 bits (97), Expect = 0.001
Identities = 78/358 (21%), Positives = 136/358 (37%), Gaps = 40/358 (11%)
Query: 64 LLLVAVAVLASLVFRKVDSLSEDISLTQSIY--DKKLVLMQKNLQGLDPKALNNCSFCHE 121
LL V L +L + + E + QS+Y D K+ L+++ LQ HE
Sbjct: 646 LLKAEVQKLQALANEQAAAAHELEKMQQSVYVKDDKIRLLEEQLQ-------------HE 692
Query: 122 AGQLGPEIRKLQEELEGIQKLLLAQEVQLDQTLQAQEVLSTTSRQISQEMGSCSFSIHQV 181
E + L + Q L EVQ QTL +++ Q+ + + + V
Sbjct: 693 ISNKMEEFKILND-----QNKALKSEVQKLQTLVSEQPNKDVVEQMEKCIQEKDEKLKTV 747
Query: 182 NQSLGLFLAQVRGWQATTAGLDLSLKDLTQECYDVKAAVH-QINFT--VGQTSEWIHGIQ 238
+ L L QV + + LT+E D+KA + Q++F V + + IH
Sbjct: 748 EELLETGLIQVATKEEELNAIRTENSSLTKEVQDLKAKQNDQVSFASLVEELKKVIHEKD 807
Query: 239 RKTDEETLTLQKIVTDWQNYTRLFSGLRTTSTKTGEAVKNI------QATLGASSQRISQ 292
K L+ + N + L+ E + N+ Q ++ + Q +
Sbjct: 808 GKIKSVEELLEAELLKVANKEKTVQDLKQEIKALKEEIGNVQLEKAQQLSITSKVQELQN 867
Query: 293 ----NSESMHDLVLQVMGLQLQLDNISSFLDDHEENMHDLQYHT-HYAQNRTVE-----R 342
E M+ + + + L N +L D +E L+ H AQ+ E +
Sbjct: 868 LLKGKEEQMNTMKAVLEEKEKDLANTGKWLQDLQEENESLKAHVQEVAQHNLKEASSASQ 927
Query: 343 FESLEGRMASHEIEIGTIFTNINATDNHVHSMLKYLDDVRLSCTLGFHTHAEELYYLN 400
FE LE + E E+ + + ++ + S + L DV+ L F + E+L N
Sbjct: 928 FEELEIVLKEKENELKRLEAMLKERESDLSSKTQLLQDVQDENKL-FKSQIEQLKQQN 984
>gi|33620775 kinectin 1 isoform a [Homo sapiens]
Length = 1357
Score = 42.0 bits (97), Expect = 0.001
Identities = 78/358 (21%), Positives = 136/358 (37%), Gaps = 40/358 (11%)
Query: 64 LLLVAVAVLASLVFRKVDSLSEDISLTQSIY--DKKLVLMQKNLQGLDPKALNNCSFCHE 121
LL V L +L + + E + QS+Y D K+ L+++ LQ HE
Sbjct: 646 LLKAEVQKLQALANEQAAAAHELEKMQQSVYVKDDKIRLLEEQLQ-------------HE 692
Query: 122 AGQLGPEIRKLQEELEGIQKLLLAQEVQLDQTLQAQEVLSTTSRQISQEMGSCSFSIHQV 181
E + L + Q L EVQ QTL +++ Q+ + + + V
Sbjct: 693 ISNKMEEFKILND-----QNKALKSEVQKLQTLVSEQPNKDVVEQMEKCIQEKDEKLKTV 747
Query: 182 NQSLGLFLAQVRGWQATTAGLDLSLKDLTQECYDVKAAVH-QINFT--VGQTSEWIHGIQ 238
+ L L QV + + LT+E D+KA + Q++F V + + IH
Sbjct: 748 EELLETGLIQVATKEEELNAIRTENSSLTKEVQDLKAKQNDQVSFASLVEELKKVIHEKD 807
Query: 239 RKTDEETLTLQKIVTDWQNYTRLFSGLRTTSTKTGEAVKNI------QATLGASSQRISQ 292
K L+ + N + L+ E + N+ Q ++ + Q +
Sbjct: 808 GKIKSVEELLEAELLKVANKEKTVQDLKQEIKALKEEIGNVQLEKAQQLSITSKVQELQN 867
Query: 293 ----NSESMHDLVLQVMGLQLQLDNISSFLDDHEENMHDLQYHT-HYAQNRTVE-----R 342
E M+ + + + L N +L D +E L+ H AQ+ E +
Sbjct: 868 LLKGKEEQMNTMKAVLEEKEKDLANTGKWLQDLQEENESLKAHVQEVAQHNLKEASSASQ 927
Query: 343 FESLEGRMASHEIEIGTIFTNINATDNHVHSMLKYLDDVRLSCTLGFHTHAEELYYLN 400
FE LE + E E+ + + ++ + S + L DV+ L F + E+L N
Sbjct: 928 FEELEIVLKEKENELKRLEAMLKERESDLSSKTQLLQDVQDENKL-FKSQIEQLKQQN 984
Score = 30.4 bits (67), Expect = 3.6
Identities = 55/323 (17%), Positives = 123/323 (38%), Gaps = 38/323 (11%)
Query: 72 LASLVFRKVDSLSEDISLTQSIYDKKLVLMQKNLQGLDPKALNNCSFCHEAGQLGPEIRK 131
L +++ + LS L Q + D+ L + ++ L + S +L I +
Sbjct: 945 LEAMLKERESDLSSKTQLLQDVQDENK-LFKSQIEQLKQQNYQQASSFPPHEELLKVISE 1003
Query: 132 LQEELEGIQKLL--LAQEVQ---------LDQTLQAQEVLSTTSRQISQEMGSCSFSIHQ 180
++E+ G+ L L V+ ++ +A E L++T + + ++ S
Sbjct: 1004 REKEISGLWNELDSLKDAVEHQRKKNNDLREKNWEAMEALASTEKMLQDKVNKTS----- 1058
Query: 181 VNQSLGLFLAQVRGWQATTAGLDLSLKDLTQECYDVKAAVHQINFTVGQTSEWIHGIQRK 240
+ Q ++L K++ ++ + + +++ EW+HG ++K
Sbjct: 1059 ------------KERQQQVEAVELEAKEVLKKLFPKVSVPSNLSY-----GEWLHGFEKK 1101
Query: 241 TDE--ETLTLQKIVTDWQNYTRLFSGLRTTSTKTGEAVKNIQATLGASSQRISQNSESMH 298
E + + V ++ + + T E K++ A Q++ ++ E
Sbjct: 1102 AKECMAGTSGSEEVKVLEHKLKEADEMHTLLQLECEKYKSVLAETEGILQKLQRSVEQEE 1161
Query: 299 D-LVLQVMGLQLQLDNISSFLDDHEENMHDLQYHTHYAQNRTVERFESLEGRMASHEIEI 357
+ ++V + + S E+ + L+ +N ER E LE + E+E
Sbjct: 1162 NKWKVKVDESHKTIKQMQSSFTSSEQELERLRSENKDIENLRRER-EHLEMELEKAEMER 1220
Query: 358 GTIFTNINATDNHVHSMLKYLDD 380
T T + + + + K LDD
Sbjct: 1221 STYVTEVRELKDLLTELQKKLDD 1243
>gi|118498362 kinectin 1 isoform b [Homo sapiens]
Length = 1306
Score = 41.2 bits (95), Expect = 0.002
Identities = 74/350 (21%), Positives = 134/350 (38%), Gaps = 47/350 (13%)
Query: 64 LLLVAVAVLASLVFRKVDSLSEDISLTQSIY--DKKLVLMQKNLQGLDPKALNNCSFCHE 121
LL V L +L + + E + QS+Y D K+ L+++ LQ HE
Sbjct: 646 LLKAEVQKLQALANEQAAAAHELEKMQQSVYVKDDKIRLLEEQLQ-------------HE 692
Query: 122 AGQLGPEIRKLQEELEGIQKLLLAQEVQLDQTLQAQEVLSTTSRQISQEMGSCSFSIHQV 181
E + L + Q L EVQ QTL +++ Q+ + + + V
Sbjct: 693 ISNKMEEFKILND-----QNKALKSEVQKLQTLVSEQPNKDVVEQMEKCIQEKDEKLKTV 747
Query: 182 NQSLGLFLAQVRGWQATTAGLDLSLKDLTQECYDVKAAVH-QINFTVGQTSEWIHGIQRK 240
+ L L QV + + LT+E D+KA + Q++F E + + +
Sbjct: 748 EELLETGLIQVATKEEELNAIRTENSSLTKEVQDLKAKQNDQVSF--ASLVEELKKVIHE 805
Query: 241 TDEETLTLQKIVTDWQNYTRLFSGLRTTSTKTGEAVKNIQATLGASSQRISQ----NSES 296
D + +++++ L K K +Q ++ + Q + E
Sbjct: 806 KDGKIKSVEEL-------------LEAELLKVANKEKTVQLSITSKVQELQNLLKGKEEQ 852
Query: 297 MHDLVLQVMGLQLQLDNISSFLDDHEENMHDLQYHT-HYAQNRTVE-----RFESLEGRM 350
M+ + + + L N +L D +E L+ H AQ+ E +FE LE +
Sbjct: 853 MNTMKAVLEEKEKDLANTGKWLQDLQEENESLKAHVQEVAQHNLKEASSASQFEELEIVL 912
Query: 351 ASHEIEIGTIFTNINATDNHVHSMLKYLDDVRLSCTLGFHTHAEELYYLN 400
E E+ + + ++ + S + L DV+ L F + E+L N
Sbjct: 913 KEKENELKRLEAMLKERESDLSSKTQLLQDVQDENKL-FKSQIEQLKQQN 961
>gi|153791670 keratin 76 [Homo sapiens]
Length = 638
Score = 40.4 bits (93), Expect = 0.003
Identities = 33/155 (21%), Positives = 72/155 (46%), Gaps = 16/155 (10%)
Query: 79 KVDSLSEDISLTQSIYDKKLVLMQKNLQGLDPKALNNCSFCHEAGQLGPEIRKLQEELEG 138
KVDSL++++S +++Y+ +L MQ + + + C + G + E+R EE+
Sbjct: 307 KVDSLTDEVSFLRTLYEMELSQMQSHASDTSVVLSMDNNRCLDLGSIIAEVRAQYEEIAQ 366
Query: 139 IQKLLLAQEVQLDQTLQAQEVLSTTSRQISQEMGSCSFSIHQVNQSLGLFLAQVRGWQAT 198
K ++ L QT + L TT+ + ++ + I ++N+ + A++ +
Sbjct: 367 RSK---SEAEALYQTKLGE--LQTTAGRHGDDLRNTKSEIMELNRMIQRLRAEIENVKKQ 421
Query: 199 TAGL-----------DLSLKDLTQECYDVKAAVHQ 222
A L +++LKD + D++ A+ +
Sbjct: 422 NANLQTAIAEAEQRGEMALKDANAKLQDLQTALQK 456
>gi|150010558 myosin, heavy polypeptide 15 [Homo sapiens]
Length = 1946
Score = 39.7 bits (91), Expect = 0.006
Identities = 51/272 (18%), Positives = 117/272 (43%), Gaps = 26/272 (9%)
Query: 100 LMQKNLQGLDPKALNNCSFCHEAGQLGPEIRKLQEELEGIQKLLLAQEVQLDQTLQAQEV 159
L QK LQ KAL + HE Q + Q+E++ + LL + ++++ QE
Sbjct: 1454 LDQKQLQS--GKALADWKQKHEESQA--LLDASQKEVQALSTELLKLKNTYEESIVGQET 1509
Query: 160 LSTTSRQISQEMGSCSFSIHQVNQSLGLFLAQVRGW------------QATTAGLDLSLK 207
L ++ + +E+ + + + + ++L + +V+ + T L+ +
Sbjct: 1510 LRRENKNLQEEISNLTNQVREGTKNL-TEMEKVKKLIEEEKTEVQVTLEETEGALERNES 1568
Query: 208 DLTQECYDVKAAVHQINFTVGQTSEWIHGIQRKTDEETLTLQKIVTDWQNYTRLFSGLRT 267
+ ++ A ++ + + E I +RK + T+ + + + + +
Sbjct: 1569 KILHFQLELLEAKAELERKLSEKDEEIENFRRK---QQCTIDSLQSSLDSEAKSRIEVTR 1625
Query: 268 TSTKTGEAVKNIQATLGASSQRISQNSESMHDLVLQVMGLQLQLDNISSFLDDHEENMHD 327
K E + ++ L +++++S+ ++S+ L +Q+ LQ+QLD+ + D +E +
Sbjct: 1626 LKKKMEEDLNEMELQLSCANRQVSEATKSLGQLQIQIKDLQMQLDDSTQLNSDLKEQVAV 1685
Query: 328 LQYHTHYAQNRTVERFESLE-----GRMASHE 354
+ Q+ +E SL+ GR S E
Sbjct: 1686 AERRNSLLQSE-LEDLRSLQEQTERGRRLSEE 1716
Score = 35.0 bits (79), Expect = 0.15
Identities = 43/239 (17%), Positives = 98/239 (41%), Gaps = 14/239 (5%)
Query: 121 EAGQLGPEIRKLQEELEGIQKLLLAQEVQLDQTLQAQEVLSTTSRQISQEMGSCSFSIHQ 180
++ ++G E+ L+EE +QK L E Q ++ L+A++V ++QE +
Sbjct: 853 KSSEVGEEVAGLKEECAQLQKALEKSEFQREE-LKAKQV------SLTQEKNDLILQLQA 905
Query: 181 VNQSLGLFLAQVRGWQATTAGLDLSLKDLTQECYDVKAAVHQINFTVGQTSEWIHGIQRK 240
++L Q + L+ +K+L++ + + ++ + + ++++
Sbjct: 906 EQETLANVEEQCEWLIKSKIQLEARVKELSERVEEEEEINSELTARGRKLEDECFELKKE 965
Query: 241 TDE-ETLTL----QKIVTDW--QNYTRLFSGLRTTSTKTGEAVKNIQATLGASSQRISQN 293
D+ ET+ + +K T+ +N T L +K A K +Q + +
Sbjct: 966 IDDLETMLVKSEKEKRTTEHKVKNLTEEVEFLNEDISKLNRAAKVVQEAHQQTLDDLHME 1025
Query: 294 SESMHDLVLQVMGLQLQLDNISSFLDDHEENMHDLQYHTHYAQNRTVERFESLEGRMAS 352
E + L + L+ Q+D + L+ + + + H + ES+E +S
Sbjct: 1026 EEKLSSLSKANLKLEQQVDELEGALEQERKARMNCERELHKLEGNLKLNRESMENLESS 1084
>gi|151101140 coiled-coil domain containing 2 isoform a [Homo
sapiens]
Length = 600
Score = 39.3 bits (90), Expect = 0.008
Identities = 37/200 (18%), Positives = 85/200 (42%), Gaps = 16/200 (8%)
Query: 135 ELEGIQKLLLAQEVQLDQTLQAQEVLSTTSRQISQEMGSCSFSIHQVNQSLGLFLAQVRG 194
ELE + ++A++ + ++ +E L + +QE+ S + + + F+ ++R
Sbjct: 283 ELESHRDQMIAEDKSIGSPMEEREKLLKQIKDDNQEIASMERQLTDTKEKINQFIEEIRQ 342
Query: 195 WQATTAGLDLSLKD----LTQECYDVKAAVHQINFTVGQTSEWIHG-IQRKTDEETLTLQ 249
LD+ L++ + Q+ ++K ++ + E + ++RK E
Sbjct: 343 -------LDMDLEEHQGEMNQKYKELKKREEHMDTFIETFEETKNQELKRKAQIEA---- 391
Query: 250 KIVTDWQNYTRLFSGLRTTSTKTGEAVKNIQATLGASSQRISQNSESMHDLVLQVMGLQL 309
IV ++ +R + + S+ T + +K +Q L S + ++ + +L + LQL
Sbjct: 392 NIVALLEHCSRNINRIEQISSITNQELKMMQDDLNFKSTEVQKSQSTAQNLTSDIQRLQL 451
Query: 310 QLDNISSFLDDHEENMHDLQ 329
L + E H L+
Sbjct: 452 DLQKMELLESKMTEEQHSLK 471
>gi|151105223 coiled-coil domain containing 2 isoform a [Homo
sapiens]
Length = 600
Score = 39.3 bits (90), Expect = 0.008
Identities = 37/200 (18%), Positives = 85/200 (42%), Gaps = 16/200 (8%)
Query: 135 ELEGIQKLLLAQEVQLDQTLQAQEVLSTTSRQISQEMGSCSFSIHQVNQSLGLFLAQVRG 194
ELE + ++A++ + ++ +E L + +QE+ S + + + F+ ++R
Sbjct: 283 ELESHRDQMIAEDKSIGSPMEEREKLLKQIKDDNQEIASMERQLTDTKEKINQFIEEIRQ 342
Query: 195 WQATTAGLDLSLKD----LTQECYDVKAAVHQINFTVGQTSEWIHG-IQRKTDEETLTLQ 249
LD+ L++ + Q+ ++K ++ + E + ++RK E
Sbjct: 343 -------LDMDLEEHQGEMNQKYKELKKREEHMDTFIETFEETKNQELKRKAQIEA---- 391
Query: 250 KIVTDWQNYTRLFSGLRTTSTKTGEAVKNIQATLGASSQRISQNSESMHDLVLQVMGLQL 309
IV ++ +R + + S+ T + +K +Q L S + ++ + +L + LQL
Sbjct: 392 NIVALLEHCSRNINRIEQISSITNQELKMMQDDLNFKSTEVQKSQSTAQNLTSDIQRLQL 451
Query: 310 QLDNISSFLDDHEENMHDLQ 329
L + E H L+
Sbjct: 452 DLQKMELLESKMTEEQHSLK 471
>gi|151105229 coiled-coil domain containing 2 isoform a [Homo
sapiens]
Length = 600
Score = 39.3 bits (90), Expect = 0.008
Identities = 37/200 (18%), Positives = 85/200 (42%), Gaps = 16/200 (8%)
Query: 135 ELEGIQKLLLAQEVQLDQTLQAQEVLSTTSRQISQEMGSCSFSIHQVNQSLGLFLAQVRG 194
ELE + ++A++ + ++ +E L + +QE+ S + + + F+ ++R
Sbjct: 283 ELESHRDQMIAEDKSIGSPMEEREKLLKQIKDDNQEIASMERQLTDTKEKINQFIEEIRQ 342
Query: 195 WQATTAGLDLSLKD----LTQECYDVKAAVHQINFTVGQTSEWIHG-IQRKTDEETLTLQ 249
LD+ L++ + Q+ ++K ++ + E + ++RK E
Sbjct: 343 -------LDMDLEEHQGEMNQKYKELKKREEHMDTFIETFEETKNQELKRKAQIEA---- 391
Query: 250 KIVTDWQNYTRLFSGLRTTSTKTGEAVKNIQATLGASSQRISQNSESMHDLVLQVMGLQL 309
IV ++ +R + + S+ T + +K +Q L S + ++ + +L + LQL
Sbjct: 392 NIVALLEHCSRNINRIEQISSITNQELKMMQDDLNFKSTEVQKSQSTAQNLTSDIQRLQL 451
Query: 310 QLDNISSFLDDHEENMHDLQ 329
L + E H L+
Sbjct: 452 DLQKMELLESKMTEEQHSLK 471
>gi|4758650 kinesin family member 5C [Homo sapiens]
Length = 957
Score = 38.5 bits (88), Expect = 0.013
Identities = 66/330 (20%), Positives = 132/330 (40%), Gaps = 20/330 (6%)
Query: 128 EIRKLQEELEGIQKLLLAQEVQLDQTLQAQEVLSTTSRQISQEMGSCSFSIHQVNQSLGL 187
+ K+QEEL +Q A + ++ + LQA E L+ Q SQE+ + + N+ L
Sbjct: 462 DYEKIQEELTRLQIENEAAKDEVKEVLQALEELAVNYDQKSQEVEDKT----RANEQLTD 517
Query: 188 FLAQVRGWQATTAGLDLSLKDLTQECYDVKAAVHQINFTVGQTSEWIHGIQRKTDEETLT 247
LAQ TT L++L+ + K A +N + E I GI D +TL
Sbjct: 518 ELAQKTTTLTTTQRELSQLQELSN--HQKKRATEILNLLLKDLGE-IGGIIGTNDVKTLA 574
Query: 248 -LQKIVTDWQNYTRLF-SGLRTTSTKTGEAVKNIQATLGASSQRISQNSESMHDLVLQVM 305
+ ++ + RL+ S +++ K +++ S+++++ + + L +
Sbjct: 575 DVNGVIEEEFTMARLYISKMKSEVKSLVNRSKQLESAQMDSNRKMNASERELAACQLLIS 634
Query: 306 GLQLQLDNISSFLDDHEENMHDLQYHTHYAQNRTVERFESLEGRMASHEIEIGTIFTNIN 365
+ ++ +++ ++ + E+ L+ +Q+ E L + HE+
Sbjct: 635 QHEAKIKSLTDYMQNMEQKRRQLE----ESQDSLSEELAKLRAQEKMHEVSFQDKEKEHL 690
Query: 366 ATDNHVHSMLKYLDDVRLSCTLGFHTHAEELYYLNKSVSIMLGTTDLLRERFSLLSARLD 425
M K L+ S H ++L L + D +R+ L+ +L
Sbjct: 691 TRLQDAEEMKKALEQQMESHR---EAHQKQLSRLRDEIEEKQKIIDEIRD----LNQKLQ 743
Query: 426 LNVRNLSMIVEEMKAVDTQHGEILRNVTIL 455
L LS ++K D + L + +L
Sbjct: 744 LEQEKLSSDYNKLKIEDQEREMKLEKLLLL 773
>gi|110624781 myosin, heavy polypeptide 13, skeletal muscle [Homo
sapiens]
Length = 1938
Score = 38.1 bits (87), Expect = 0.017
Identities = 46/249 (18%), Positives = 110/249 (44%), Gaps = 14/249 (5%)
Query: 80 VDSLSEDISLTQSIYDKKLVLMQKNLQGLDPKALNNCSFCHEAGQLGPEIRKLQEELEGI 139
+D ++ + + + K+ L Q + +D + +++ F + +L I +L+EE+E
Sbjct: 1071 MDLENDKQQIEEKLKKKEFELSQLQAK-IDDEQVHSLQFQKKIKELQARIEELEEEIEA- 1128
Query: 140 QKLLLAQEVQLDQTLQAQEVLSTTSRQISQEMGSCSFSIHQVNQSLGLFLAQVRGWQATT 199
+ L +++ ++ A+E L S ++ + G+ S I + F R + T
Sbjct: 1129 -EHTLRAKIEKQRSDLARE-LEEISERLEEASGATSAQIEMNKKREAEFQKMRRDLEEAT 1186
Query: 200 AGLDLSLKDLTQECYDVKAAVHQINFTVGQTSEWIHGIQRKTDEETLTLQKIVTDWQNYT 259
+ + L ++ D A +G+ + + +++K ++E L+ + D +
Sbjct: 1187 LQHEATAATLRKKQADSVA-------ELGEQIDNLQRVKQKLEKEKSELKMEIDDMASNI 1239
Query: 260 RLFSGLRTTSTKTGEAVKNIQATLGASSQRISQNSESMHDLVLQVMGLQLQLDNISSFLD 319
S ++ +T V++ + + A + Q ++ +HDL +Q LQ Q +S ++
Sbjct: 1240 EALSKSKSNIERTCRTVEDQFSEIKAKDE---QQTQLIHDLNMQKARLQTQNGELSHRVE 1296
Query: 320 DHEENMHDL 328
+ E + L
Sbjct: 1297 EKESLISQL 1305
Score = 30.0 bits (66), Expect = 4.7
Identities = 35/186 (18%), Positives = 77/186 (41%), Gaps = 25/186 (13%)
Query: 271 KTGEAVKNIQATLGASSQRISQNSESMHDLVLQVMGLQLQLDNISSFLD----DHEENMH 326
KT + V+ ++ L + + + + E +L+V QL+L + S LD + +E +
Sbjct: 1532 KTKKLVEQEKSDLQVALEEVEGSLEHEESKILRV---QLELSQVKSELDRKVIEKDEEIE 1588
Query: 327 DLQYHTHYA--------------QNRTVERFESLEGRMASHEIEIGTIFTNINATDNHVH 372
L+ ++ A +N + + +EG + EI++G + T H+
Sbjct: 1589 QLKRNSQRAAEALQSVLDAEIRSRNDALRLKKKMEGDLNEMEIQLGHSNRQMAETQKHLR 1648
Query: 373 SMLKYLDDVRLSCTLGFHTHAEELYYLNKSVSIMLGTTDLLRERFSLLSARLDLNVRNLS 432
++ L D +L ++ + L + ++I+ LL E + L+ R
Sbjct: 1649 TVQGQLKDSQLHLDDALRSNED----LKEQLAIVERRNGLLLEELEEMKVALEQTERTRR 1704
Query: 433 MIVEEM 438
+ +E+
Sbjct: 1705 LSEQEL 1710
>gi|62243484 sarcoma antigen NY-SAR-41 [Homo sapiens]
Length = 1417
Score = 37.7 bits (86), Expect = 0.022
Identities = 50/280 (17%), Positives = 108/280 (38%), Gaps = 25/280 (8%)
Query: 84 SEDISLTQSIYDKKLVLMQKNLQGL----DPKALNNCSFCHEAGQLGPEIRKLQEELEGI 139
+ + + Y ++L M+K + L + KA++ Q E+ K ++ +
Sbjct: 985 ARQVKIEMDQYKEELSKMEKEIMHLKRDGENKAMHLSQLDMILDQTKTELEKKTNAVKEL 1044
Query: 140 QKLLLAQEVQLDQTLQAQEVLSTTSRQISQEMGSCSFSIHQVNQSLGLFLAQVRGWQATT 199
+KL + E +L + LQ +EVL T + E+ S L Q++ +
Sbjct: 1045 EKLQHSTETELTEALQKREVLETELQNAHGELKST--------------LRQLQELRDVL 1090
Query: 200 AGLDLSLKDLTQECYDVKAAVHQINFTVGQTSEWIHGIQRKTDEETLTLQKIVTDWQNYT 259
LSL++ D+ A + + + + + + + E L++ T
Sbjct: 1091 QKAQLSLEEKYTTIKDLTAELRECKMEIEDKKQELLEMDQALKERNWELKQRAA---QVT 1147
Query: 260 RLFSGLRTTSTKTGEAVKNIQATLGASSQRISQNSESMHDLVLQVMGLQLQLDNISSFLD 319
L +R + + + ++ TL S + + ++ + L ++ + QL +
Sbjct: 1148 HLDMTIREHRGEMEQKIIKLEGTLEKSELELKECNKQIESLNDKLQNAKEQLREKEFIML 1207
Query: 320 DHEENMHDLQYHTHYAQNRTVERFESLEGRMASHEIEIGT 359
+E+ + L+ RT +R + +E M E I T
Sbjct: 1208 QNEQEISQLKKEI----ERTQQRMKEMESVMKEQEQYIAT 1243
>gi|4758648 kinesin family member 5B [Homo sapiens]
Length = 963
Score = 37.0 bits (84), Expect = 0.038
Identities = 66/382 (17%), Positives = 150/382 (39%), Gaps = 38/382 (9%)
Query: 76 VFRKVDSLSEDISLTQSIYDKKLVLMQKNLQGLDPKALNNCSFCHEAGQLGPEIRKLQEE 135
+++++D E+I+ + +K M LD + L S + + E+ +LQ E
Sbjct: 428 LYKQLDDKDEEINQQSQLVEKLKTQM------LDQEELL-ASTRRDQDNMQAELNRLQAE 480
Query: 136 LEGIQKLLLAQEVQLDQTLQAQEVLSTTSRQISQEMGSCSFSIHQVNQSLGLFLAQVRGW 195
+ A + ++ + LQA E L+ Q SQE + + L ++
Sbjct: 481 ND-------ASKEEVKEVLQALEELAVNYDQKSQE-------VEDKTKEYELLSDELNQK 526
Query: 196 QATTAGLDLSLKDLTQECYDVKAAVHQINFTVGQTSEWIHGIQRKTDEETLTLQKIVTDW 255
AT A +D L+ L + K ++ ++ + I D + ++ +
Sbjct: 527 SATLASIDAELQKLKEMTNHQKKRAAEMMASLLKDLAEIGIAVGNNDVKQPEGTGMIDEE 586
Query: 256 QNYTRLFSGLRTTSTKT-GEAVKNIQATLGASSQRISQNSESMHDLVLQVMGLQLQLDNI 314
RL+ + KT + K +++T S++++ +N + + L++ + ++ ++
Sbjct: 587 FTVARLYISKMKSEVKTMVKRCKQLESTQTESNKKMEENEKELAACQLRISQHEAKIKSL 646
Query: 315 SSFLDDHEENMHDLQYHTHYAQNRTVERFESLEGRMASHEIEIGTIFTNINATDNHVHSM 374
+ +L + E+ L+ V+ L + HE+E + N V +
Sbjct: 647 TEYLQNVEQKKRQLEESVDALSEELVQ----LRAQEKVHEMEKEHL--------NKVQTA 694
Query: 375 LKYLDDVRLSCTLGFHTHAEELYYLNKSVSIMLGTTDLLRERFSLLSARLDLNVRNLSMI 434
+ V TH +++ L V L+++ + ++ L L +
Sbjct: 695 NEVKQAVEQQIQSHRETHQKQISSLRDEVEAKAKLITDLQDQ----NQKMMLEQERLRVE 750
Query: 435 VEEMKAVDTQHGEILRNVTILR 456
E++KA D + L +T+++
Sbjct: 751 HEKLKATDQEKSRKLHELTVMQ 772
>gi|109148552 keratin 3 [Homo sapiens]
Length = 628
Score = 37.0 bits (84), Expect = 0.038
Identities = 34/156 (21%), Positives = 75/156 (48%), Gaps = 18/156 (11%)
Query: 79 KVDSLSEDISLTQSIYDKKLVLMQKNLQGLD-PKALNNCSFCHEAGQLGPEIRKLQEELE 137
KVD+L ++I +++YD +L MQ ++ +++N + + L I +++ + E
Sbjct: 324 KVDALIDEIDFLRTLYDAELSQMQSHISDTSVVLSMDN----NRSLDLDSIIAEVRAQYE 379
Query: 138 GIQKLLLAQEVQLDQTLQAQEVLSTTSRQISQEMGSCSFSIHQVNQSLGLFLAQVRGWQA 197
I + A+ L QT + L TT+ + ++ + I ++N+ + A++ G +
Sbjct: 380 DIAQRSKAEAEALYQTKLGE--LQTTAGRHGDDLRNTKSEIIELNRMIQRLRAEIEGVKK 437
Query: 198 TTAGL-----------DLSLKDLTQECYDVKAAVHQ 222
A L +++LKD + +++AA+ Q
Sbjct: 438 QNANLQTAIAEAEQHGEMALKDANAKLQELQAALQQ 473
>gi|24430183 outer dense fiber of sperm tails 2 isoform 2 [Homo
sapiens]
Length = 638
Score = 36.2 bits (82), Expect = 0.065
Identities = 45/228 (19%), Positives = 88/228 (38%), Gaps = 11/228 (4%)
Query: 215 DVKAAVHQINFTVGQTSEWIHGIQRKTDEETLTLQKIVTDWQNYTRLFSGLRTTSTKTGE 274
+++ H++ T + + H I+R +E+ T+ + Q L S L
Sbjct: 142 ELEEVAHELAETEHENTVLRHNIERMKEEKDFTILQKKHLQQEKECLMSKLVEAEMDGAA 201
Query: 275 AVKNIQATLGASSQRISQNSESMHDLVLQVMGLQLQLDNISSFLDDHEENMHDL--QYHT 332
A K + A + ++ + D+ +L L +S+F ++ + DL + H
Sbjct: 202 AAKQVMALKDTIGKLKTEKQMTCTDINTLTRQKELLLQKLSTF-EETNRTLRDLLREQHC 260
Query: 333 HYAQNRTVERFESLEGRMASHEIEIGTIFTNINATDNHVHSMLKYLDDVRLSCTLGFHTH 392
R +E+ +L R+A + E + + D V +L+ + C
Sbjct: 261 KEDSERLMEQQGALLKRLAEADSEKARLLLLLQDKDKEVEELLQ-----EIQCEKAQAKT 315
Query: 393 AEELYYLNKSVSIMLGTTDLLRERFSLLSARLDLNVRNLSMIVEEMKA 440
A E L+KS+ M G ++RL + ++NL + KA
Sbjct: 316 ASE---LSKSMESMRGHLQAQLRSKEAENSRLCMQIKNLERSGNQHKA 360
>gi|24430181 outer dense fiber of sperm tails 2 isoform 1 [Homo
sapiens]
Length = 805
Score = 36.2 bits (82), Expect = 0.065
Identities = 45/228 (19%), Positives = 88/228 (38%), Gaps = 11/228 (4%)
Query: 215 DVKAAVHQINFTVGQTSEWIHGIQRKTDEETLTLQKIVTDWQNYTRLFSGLRTTSTKTGE 274
+++ H++ T + + H I+R +E+ T+ + Q L S L
Sbjct: 137 ELEEVAHELAETEHENTVLRHNIERMKEEKDFTILQKKHLQQEKECLMSKLVEAEMDGAA 196
Query: 275 AVKNIQATLGASSQRISQNSESMHDLVLQVMGLQLQLDNISSFLDDHEENMHDL--QYHT 332
A K + A + ++ + D+ +L L +S+F ++ + DL + H
Sbjct: 197 AAKQVMALKDTIGKLKTEKQMTCTDINTLTRQKELLLQKLSTF-EETNRTLRDLLREQHC 255
Query: 333 HYAQNRTVERFESLEGRMASHEIEIGTIFTNINATDNHVHSMLKYLDDVRLSCTLGFHTH 392
R +E+ +L R+A + E + + D V +L+ + C
Sbjct: 256 KEDSERLMEQQGALLKRLAEADSEKARLLLLLQDKDKEVEELLQ-----EIQCEKAQAKT 310
Query: 393 AEELYYLNKSVSIMLGTTDLLRERFSLLSARLDLNVRNLSMIVEEMKA 440
A E L+KS+ M G ++RL + ++NL + KA
Sbjct: 311 ASE---LSKSMESMRGHLQAQLRSKEAENSRLCMQIKNLERSGNQHKA 355
>gi|55770834 centromere protein F [Homo sapiens]
Length = 3114
Score = 36.2 bits (82), Expect = 0.065
Identities = 50/285 (17%), Positives = 109/285 (38%), Gaps = 28/285 (9%)
Query: 80 VDSLSEDISLTQSIYDK-----KLVLMQKNLQGLDPKALNNCSFCHEAGQLGPEIRKLQE 134
+ +LS D+S + + DK KL ++K+ Q L +L C ++ QL E L +
Sbjct: 2016 LQTLSSDVS--ELLKDKTHLQEKLQSLEKDSQAL---SLTKCELENQIAQLNKEKELLVK 2070
Query: 135 ELEGIQKLLLAQEVQLDQTLQAQEVLSTTSRQISQEMGSCSFSIHQVNQSLGLFLAQVRG 194
E E +Q L + + +A E + + + S +HQ+ + + ++
Sbjct: 2071 ESESLQARLSESDYEKLNVSKALEAALVEKGEFALRLSSTQEEVHQLRRGIEKLRVRIEA 2130
Query: 195 WQATTAGLDLSLKDLTQECYDVKAAVHQINFTVGQTSEWIHGIQRKTDEETLTLQKIVTD 254
+ + LK+ +E +K + + ++R+ + ++ D
Sbjct: 2131 DEKKQLHIAEKLKERERENDSLK--------------DKVENLERELQMSEENQELVILD 2176
Query: 255 WQNYTRLFSGLRTTSTKTGEAVKNIQATLGASSQRISQNSESMHDLVLQVMGLQLQLDNI 314
+N L+T + ++K + L ++ + + Q+ L L +
Sbjct: 2177 AENSKAEVETLKTQIEEMARSLKVFELDLVTLRSEKENLTKQIQEKQGQLSELDKLLSSF 2236
Query: 315 SSFLDDHEENMHDLQYHTHYA----QNRTVERFESLEGRMASHEI 355
S L++ E+ ++ + A QN+ E E++ EI
Sbjct: 2237 KSLLEEKEQAEIQIKEESKTAVEMLQNQLKELNEAVAALCGDQEI 2281
>gi|55770888 early endosome antigen 1, 162kD [Homo sapiens]
Length = 1411
Score = 35.8 bits (81), Expect = 0.085
Identities = 39/216 (18%), Positives = 85/216 (39%), Gaps = 15/216 (6%)
Query: 196 QATTAGLDLSLKDLTQECYDVKAAVHQINFTVGQTSEWIHGIQRKTDEETLTLQKIVTDW 255
QAT DL + L + ++H+I+ + + E ++ + E Q + ++
Sbjct: 336 QATLHQKDLDCQQLQSRLSASETSLHRIHVELSEKGEATQKLKEELSEVETKYQHLKAEF 395
Query: 256 -----------QNYTRLFSGLRTTSTKTGEAVKNIQATLGASSQRISQNSESMHDLVLQV 304
Q+ +L S + +K E + + G ++ +SE + D QV
Sbjct: 396 KQLQQQREEKEQHGLQLQSEINQLHSKLLETERQLGEAHGRLKEQRQLSSEKLMDKEQQV 455
Query: 305 MGLQLQLDNISSFLDDHEENMHDLQYHTHYAQNRTVER---FESLEGRMASHEIEIGTIF 361
LQL+L + L + N +LQ+ + + E+ +S ++ + ++ +
Sbjct: 456 ADLQLKLSRLEEQLKEKVTNSTELQHQLDKTKQQHQEQQALQQSTTAKLREAQNDLEQVL 515
Query: 362 TNINATDNHVHSMLKYLDDVRLSCTLGFHTHAEELY 397
I D + ++ L + + +L E+LY
Sbjct: 516 RQIGDKDQKIQNLEALLQKSKENISL-LEKEREDLY 550
Score = 33.9 bits (76), Expect = 0.32
Identities = 56/258 (21%), Positives = 100/258 (38%), Gaps = 44/258 (17%)
Query: 121 EAGQLGPEIRKLQEELEGIQKLLLAQEVQLDQTLQAQEVLSTTSRQISQEMGSCSFSIHQ 180
E + G +KL+EEL ++ + + Q Q +E Q+ E+ + +
Sbjct: 366 ELSEKGEATQKLKEELSEVETKYQHLKAEFKQLQQQREEKEQHGLQLQSEINQLHSKLLE 425
Query: 181 VNQSLGLFLAQVRGWQATTAGLDLSLKDLTQECYDVKAAV----HQINFTVGQTSEWIHG 236
+ LG +++ + ++ L D Q+ D++ + Q+ V ++E H
Sbjct: 426 TERQLGEAHGRLKEQRQLSSE---KLMDKEQQVADLQLKLSRLEEQLKEKVTNSTELQHQ 482
Query: 237 IQR--KTDEETLTLQKIVT----DWQNYTRLFSGLRTTSTKTGEAVKNIQATLGASSQRI 290
+ + + +E LQ+ T + QN L LR K + ++N++A L S + I
Sbjct: 483 LDKTKQQHQEQQALQQSTTAKLREAQN--DLEQVLRQIGDKD-QKIQNLEALLQKSKENI 539
Query: 291 S------------------------QNSESMHDLVLQVMGLQLQLDNISSFLDDHEENMH 326
S Q E H L QV L +L N S +EN+H
Sbjct: 540 SLLEKEREDLYAKIQAGEGETAVLNQLQEKNHTLQEQVTQLTEKLKNQSESHKQAQENLH 599
Query: 327 D----LQYHTHYAQNRTV 340
D + H AQ+R +
Sbjct: 600 DQVQEQKAHLRAAQDRVL 617
Score = 33.1 bits (74), Expect = 0.55
Identities = 61/284 (21%), Positives = 115/284 (40%), Gaps = 46/284 (16%)
Query: 85 EDISLTQSIYDKKLVLMQKNLQGLDPKALNNCSFCHEAGQLGPEIRKLQEELEGIQKLLL 144
+DI +S+ +K+LV + L ++ C + EI KL EEL+ KL
Sbjct: 1106 QDIQKEKSLKEKELVNEKSKLAEIEEIK------CRQE----KEITKLNEELKS-HKLES 1154
Query: 145 AQEVQLDQTLQAQEVLSTTSRQISQEMGSCSFSIHQVNQSLGLFLAQVRGWQATTAGLDL 204
+E+ A+++L ++ + S ++ Q ++ + QV+ +
Sbjct: 1155 IKEIT--NLKDAKQLLIQQKLELQGKADSLKAAVEQEKRNQQILKDQVKKEE-------- 1204
Query: 205 SLKDLTQECYDVKAAVHQINFTVGQTSEWIHGIQRKTDEET-LTLQ---------KIVTD 254
++L +E + +A +H + E G+++ + E LT+Q + +
Sbjct: 1205 --EELKKEFIEKEAKLHS------EIKEKEVGMKKHEENEAKLTMQITALNENLGTVKKE 1256
Query: 255 WQNYTRLFSGL-RTTSTKTGE------AVKNIQATLGASSQRISQNSESMHDLVLQVMGL 307
WQ+ R S L + T GE V+N Q A +R + + L +V+ L
Sbjct: 1257 WQSSQRRVSELEKQTDDLRGEIAVLEATVQNNQDERRALLERCLKGEGEIEKLQTKVLEL 1316
Query: 308 QLQLDNISSFLDDHEENMHDLQYHTHYAQNRTVERFESLEGRMA 351
Q +LDN ++ + + LQ A NR ++ MA
Sbjct: 1317 QRKLDNTTAAVQELGRENQSLQIKHTQALNRKWAEDNEVQNCMA 1360
>gi|154354990 ankyrin repeat domain 26 [Homo sapiens]
Length = 1710
Score = 35.8 bits (81), Expect = 0.085
Identities = 58/304 (19%), Positives = 128/304 (42%), Gaps = 38/304 (12%)
Query: 79 KVDSLSEDISLTQSIYDKKLVLMQKNLQGLDPKALNNCSFCHEAGQLGPEIRKLQEELEG 138
K+D L+ ++ S K L L KN Q L + L+ + + +L +KL++E+
Sbjct: 1405 KIDDLTAELETAGS---KCLHLDTKN-QILQEELLSMKTVQKKCEKLQKNKKKLEQEVIN 1460
Query: 139 IQKLLLAQEVQLDQTLQ-AQEVLSTTSRQISQEMGSCSFSIH-QVNQSLGLFLAQVRGWQ 196
++ + V+L Q Q QE+ ++I++++ + + Q L + +
Sbjct: 1461 LRSHIERNMVELGQVKQYKQEIEERARQEIAEKLKEVNLFLQAQAASQENLEQFRENNFA 1520
Query: 197 ATTAGLDLSLKDLTQECYDVKAAVHQINFTVGQTSEWIH-----------GIQRKTDEET 245
+ + ++L +KDL E +K + N T + + ++ KT+E
Sbjct: 1521 SMKSQMELRIKDLESELSKIKTSQEDFNKTELEKYKQLYLEELKVRKSLSSKLTKTNERL 1580
Query: 246 LTLQ-KIVTDWQNYTRLFSGLRTTSTKTGEAVKNIQATLGASSQRISQNSESMHDLVLQV 304
+ K++ + Q LF+ L T V N+ +L + + I + +LV+
Sbjct: 1581 AEVNTKLLVEKQQSRSLFTTLTTRPVMEPPCVGNLNNSLDLNRKLIPR-----ENLVIST 1635
Query: 305 MGLQLQLDNISSFLDDHEENMHDLQYHTHYAQNRTVERFESLEGRMASHEIEIGTIFTNI 364
+ +++ ++L ++ + E+ + E + A+ E+E G+I + +
Sbjct: 1636 SNPRASNNSMENYLSKMQQEL---------------EKNITRELKEAAAELESGSIASPL 1680
Query: 365 NATD 368
+TD
Sbjct: 1681 GSTD 1684
>gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]
Length = 2230
Score = 35.4 bits (80), Expect = 0.11
Identities = 49/257 (19%), Positives = 110/257 (42%), Gaps = 22/257 (8%)
Query: 128 EIRKLQEELEGIQKLLLAQ-EVQLDQTLQAQEV-----------LSTTSRQI-SQEMGSC 174
+ + L E+LE + +++A+ + Q+ +TL+ +E ++T ++ Q+ S
Sbjct: 350 DAKNLIEQLEQDKGMVIAETKRQMHETLEMKEEEIAQLRSRIKQMTTQGEELREQKEKSE 409
Query: 175 SFSIHQVNQSLGLFLAQVRGWQATTAGLDLSLKDLTQECYDVKAAVHQINFTVGQTSEWI 234
+ ++ ++L + A +D +K + + + + ++ Q V Q E +
Sbjct: 410 RAAFEELEKALSTAQKTEEARRKLKAEMDEQIKTIEKTSEEERISLQQELSRVKQ--EVV 467
Query: 235 HGIQRKTDEETLTLQKIVTDW--QNYTRLFSGLRTTSTKTGEAVKNIQATLGASSQRISQ 292
+++ ++E+ LQK+ + L L+T + E +K + +ISQ
Sbjct: 468 DVMKKSSEEQIAKLQKLHEKELARKEQELTKKLQTREREFQEQMKVALEKSQSEYLKISQ 527
Query: 293 NSESMHDLVLQVMGLQLQLDNISSFLDDHEENMHDLQYHTHYAQNRTVERFESLEGRMAS 352
E L L+ + LQ + + L + E + DLQ + R +E SLE +
Sbjct: 528 EKEQQESLALEELELQKK-----AILTESENKLRDLQQEAETYRTRILELESSLEKSLQE 582
Query: 353 HEIEIGTIFTNINATDN 369
++ + + ++ A N
Sbjct: 583 NKNQSKDLAVHLEAEKN 599
Score = 32.0 bits (71), Expect = 1.2
Identities = 51/249 (20%), Positives = 102/249 (40%), Gaps = 40/249 (16%)
Query: 108 LDPKALNNCSFCH------------EAGQLGPEIRKLQEELEGIQKLLLAQEVQLDQTLQ 155
+ PK L+N H E +LG EI +LQ++L +L +E Q + +
Sbjct: 1913 VQPKLLSNMEAQHNDLEFKLAGAEREKQKLGKEIVRLQKDLR-----MLRKEHQQELEIL 1967
Query: 156 AQEVLSTTSRQISQEMGSCSF----SIHQVNQSLGLFLAQVRGWQATTAGLDLSLKDLTQ 211
+E +I QE ++ Q+ + LAQ L++++K+
Sbjct: 1968 KKEYDQEREEKIKQEQEDLELKHNSTLKQLMREFNTQLAQ------KEQELEMTIKETIN 2021
Query: 212 ECYDVKAAVHQINFTVGQTSEWIHGIQRKTDEETLTLQKI--VTDWQNYTRLFSGLRTTS 269
+ +V+A + + +T++ + I K D+ T ++ + D + + + +R
Sbjct: 2022 KAQEVEAEL--LESHQEETNQLLKKIAEKDDDLKRTAKRYEEILDARE-EEMTAKVRDLQ 2078
Query: 270 TKTGEAVKNIQATLGASSQRISQNSESMHDLVLQVMGLQLQLDNISSFLDDHEENMHDLQ 329
T+ E K Q Q++ Q +D V +M LQ QL ++ + D + + +
Sbjct: 2079 TQLEELQKKYQ-------QKLEQEENPGNDNV-TIMELQTQLAQKTTLISDSKLKEQEFR 2130
Query: 330 YHTHYAQNR 338
H ++R
Sbjct: 2131 EQIHNLEDR 2139
>gi|31563507 GRIP and coiled-coil domain-containing 2 [Homo sapiens]
Length = 1684
Score = 35.0 bits (79), Expect = 0.15
Identities = 56/278 (20%), Positives = 112/278 (40%), Gaps = 46/278 (16%)
Query: 78 RKVDSLSEDISLTQSIYDKKLVLMQKNLQGLDPKALNNCSFCHEAGQLGPEIRKLQEELE 137
+++++L ++ +S Y + +QK L+ L ++KLQEE+E
Sbjct: 129 KEIENLKNELMAVRSKYSEDKANLQKQLEEAMNTQLELSEQLKFQNNSEDNVKKLQEEIE 188
Query: 138 ----GIQKLLLAQEVQLDQT--------LQAQEVLSTTSRQISQEMGSCS------FSIH 179
G ++ +L + QLD T Q Q ++ S+ + + S +IH
Sbjct: 189 KIRPGFEEQILYLQKQLDATTDEKKETVTQLQNIIEANSQHYQKNINSLQEELLQLKAIH 248
Query: 180 Q--VNQSLGLFLAQVRGWQATTAGLDLSLKDLTQECYDVKAAVHQINFTVGQTSEWIHGI 237
Q V + + A + +A L+ ++L ++C + SE I
Sbjct: 249 QEEVKELMCQIEASAKEHEAEINKLNELKENLVKQC---------------EASE--KNI 291
Query: 238 QRKTDEETLTLQKIVTDWQNYTRLFSGLRTTST----KTGEAVKNIQATLGASSQRISQN 293
Q+K + E L+K ++ ++ S L +T E VK+++ TL + +
Sbjct: 292 QKKYECELENLRKATSNANQDNQICSILLQENTFVEQVVNEKVKHLEDTL----KELESQ 347
Query: 294 SESMHDLVLQVMGLQLQLD-NISSFLDDHEENMHDLQY 330
+ D V + L+L+L+ + D+ DL++
Sbjct: 348 HSILKDEVTYMNNLKLKLEMDAQHIKDEFFHEREDLEF 385
Score = 30.0 bits (66), Expect = 4.7
Identities = 73/344 (21%), Positives = 134/344 (38%), Gaps = 49/344 (14%)
Query: 2 KVRSAGGDGDALCVTEEDLAGDDEDMPTFPCTQKGRPGPRCSRCQKNLSLHTSVRILYLF 61
K+R+A + DAL T L G++E + + P KNL V +L L
Sbjct: 522 KLRTAFTEKDALLETVNRLQGENEKL-----LSQQELVPELENTIKNLQEKNGVYLLSLS 576
Query: 62 L--ALLLVAVAVLASLVFRKVDSLSEDISLTQSI--YDKKLVLMQKNLQGLDPKALNNCS 117
+L + SL K D +++ + + + + KK ++ + L K
Sbjct: 577 QRDTMLKELEGKINSLTEEKDDFINKLKNSHEEMDNFHKKCEREERLILELGKKVEQTIQ 636
Query: 118 FCHEAGQLGPEI-----RKLQEELEGIQKLLLAQEVQLDQTLQAQEVLSTTSRQISQEMG 172
+ E Q E+ L+E+ + QKL VQ+ + +EVLS + + +E
Sbjct: 637 YNSELEQKVNELTGGLEETLKEKDQNDQKLEKLM-VQMKVLSEDKEVLSAEVKSLYEENN 695
Query: 173 SCSFSIHQVNQSLGLFLAQVRGWQATTAGLDLSLKDLTQECYDVKAAVHQINFTVGQTSE 232
S Q+++ L +FL+Q +E +K + Q+ + E
Sbjct: 696 KLSSEKKQLSRDLEVFLSQ-------------------KEDVILKEHITQLEKKLQLMVE 736
Query: 233 WIHGIQRKTDEETLTLQKIVTDWQNYTRLFS-GLRTTSTKTGEAVKNIQATLGASSQRIS 291
+ + + E +QK+ Q Y L G + + V N+ +G S +I+
Sbjct: 737 EQDNLNKLLENE--QVQKLFVKTQLYGFLKEMGSEVSEDSEEKDVVNVLQAVGESLAKIN 794
Query: 292 --------QNSESMHDLVLQVMGLQ----LQLDNISSFLDDHEE 323
Q E + +L ++ LQ +Q + + S L D+E+
Sbjct: 795 EEKCNLAFQRDEKVLELEKEIKCLQEESVVQCEELKSLLRDYEQ 838
>gi|153945790 myosin, heavy chain 8, skeletal muscle, perinatal [Homo
sapiens]
Length = 1937
Score = 34.3 bits (77), Expect = 0.25
Identities = 34/175 (19%), Positives = 66/175 (37%), Gaps = 24/175 (13%)
Query: 200 AGLDLSLKDLTQECYDVKAAVHQINFTVGQTSEWIHGIQRKTDEETLTLQKIVTDWQNYT 259
A L + L EC ++K + + T+ + + H + K +N T
Sbjct: 937 AELTAKKRKLEDECSELKKDIDDLELTLAKVEKEKHATENKV--------------KNLT 982
Query: 260 RLFSGLRTTSTKTGEAVKNIQATLGASSQRISQNSESMHDLVLQVMGLQLQLDNISSFLD 319
+GL T K + K +Q T + + + ++ L L+ Q+D++ L+
Sbjct: 983 EEMAGLDETIAKLSKEKKALQETHQQTLDDLQAEEDKVNILTKAKTKLEQQVDDLEGSLE 1042
Query: 320 -------DHEENMHDLQYHTHYAQNRTVER---FESLEGRMASHEIEIGTIFTNI 364
D E L+ AQ T++ + L+ ++ E EI + + I
Sbjct: 1043 QEKKLRMDLERAKRKLEGDLKLAQESTMDMENDKQQLDEKLEKKEFEISNLISKI 1097
>gi|58530840 desmoplakin isoform I [Homo sapiens]
Length = 2871
Score = 33.9 bits (76), Expect = 0.32
Identities = 47/268 (17%), Positives = 108/268 (40%), Gaps = 28/268 (10%)
Query: 85 EDISLTQSIYDKKLVLMQKNLQGLD------PKALNNCSFCHEAGQLGPEIRKLQEELEG 138
E +S +++ D+ + Q +L+ L + LN A + + +KL+EELEG
Sbjct: 1543 ERVSQERTVKDQDITRFQNSLKELQLQKQKVEEELNRLK--RTASEDSCKRKKLEEELEG 1600
Query: 139 IQKLLLAQEVQLDQTLQAQEVLSTTSRQISQEMGSCSFSIHQVNQSLGLFLAQVRGWQAT 198
+++ L Q +++ Q E S ++ + + Q L L + + Q
Sbjct: 1601 MRRSLKEQAIKITNLTQQLEQASIVKKRSEDD-------LRQQRDVLDGHLREKQRTQEE 1653
Query: 199 TAGLDLSLKDLTQECYDVKAAVHQINFTVGQTSEWIHGIQRKTDEETLTLQKIVTDWQNY 258
L ++ L ++ + +V Q + + I R +E + ++++ + +N
Sbjct: 1654 LRRLSSEVEALRRQLLQEQESVKQAHLRNEHFQKAIEDKSRSLNESKIEIERLQSLTENL 1713
Query: 259 TRLFSGLRTTSTKTGEAVKNIQATLGASSQRISQNSESMHDLVLQVMGLQLQLDN----- 313
T+ L E ++N++ + S+ + +L++ QLQ+ N
Sbjct: 1714 TKEHLMLE-------EELRNLRLEYDDLRRGRSEADSDKNATILELRS-QLQISNNRTLE 1765
Query: 314 ISSFLDDHEENMHDLQYHTHYAQNRTVE 341
+ ++D + +L+ Q + +E
Sbjct: 1766 LQGLINDLQRERENLRQEIEKFQKQALE 1793
Score = 33.5 bits (75), Expect = 0.42
Identities = 65/340 (19%), Positives = 129/340 (37%), Gaps = 31/340 (9%)
Query: 128 EIRKLQEELEGIQKLLLAQEVQLDQTLQA-QEVLSTTSRQISQEMGSCSFSIHQVNQSLG 186
EI +L+ E + K E +L + E + + Q E+ +IHQ+
Sbjct: 1326 EIERLKAEFQEEAKRRWEYENELSKVRNNYDEEIISLKNQFETEINITKTTIHQLTMQK- 1384
Query: 187 LFLAQVRGWQATTAGLDLSLKDLTQECYDVKAAVHQINFTVGQTSEWIHGIQRKTDEETL 246
+ T+G + +LT+E + + ++ T+ QT+E + ++ ++
Sbjct: 1385 ---------EEDTSGYRAQIDNLTRENRSLSEEIKRLKNTLTQTTENLRRVEEDIQQQKA 1435
Query: 247 TLQKIVTDWQNYTRLFSGLR-TTSTKTGEAVKNIQATLGASSQRISQNSESMHDLVLQVM 305
T ++ Q +L LR T +T E+V+ Q+ A+ +N E + ++
Sbjct: 1436 TGSEVS---QRKQQLEVELRQVTQMRTEESVRYKQSLDDAAKTIQDKNKE-----IERLK 1487
Query: 306 GLQLQLDNISSFLDDHEENMHDLQYHTHYAQN---RTVERFESLEGRMASHEIEIGTIFT 362
L + N L+D + +QY A + T+ + + E + I+ +
Sbjct: 1488 QLIDKETNDRKCLEDENARLQRVQYDLQKANSSATETINKLKVQEQELTRLRIDYERVSQ 1547
Query: 363 NINATDNHVHSMLKYLDDVRLSCTLGFHTHAEELYYLNKSVSIMLGTTDLLRERFSLLSA 422
D + L +++L EEL L ++ S L E +
Sbjct: 1548 ERTVKDQDITRFQNSLKELQLQ----KQKVEEELNRLKRTASEDSCKRKKLEEELEGMRR 1603
Query: 423 RLD---LNVRNLSMIVEEMKAVDTQHGEILRNV-TILRGH 458
L + + NL+ +E+ V + + LR +L GH
Sbjct: 1604 SLKEQAIKITNLTQQLEQASIVKKRSEDDLRQQRDVLDGH 1643
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.132 0.374
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,225,185
Number of Sequences: 37866
Number of extensions: 608724
Number of successful extensions: 2626
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 109
Number of HSP's that attempted gapping in prelim test: 2451
Number of HSP's gapped (non-prelim): 276
length of query: 466
length of database: 18,247,518
effective HSP length: 106
effective length of query: 360
effective length of database: 14,233,722
effective search space: 5124139920
effective search space used: 5124139920
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.