Guide to the Human Genome
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Name: CCDC132 Sequence: fasta or formatted (327aa) NCBI GI: 33438577
Description:

coiled-coil domain containing 132 isoform b

Referenced in:

Coiled-Coil Proteins

Other entries for this name:
alt prot [964aa] coiled-coil domain containing 132 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         20           2
 C cysteine            2.4          8           1
 D aspartate           4.6         15           1
 E glutamate           8.3         27           3
 F phenylalanine       2.8          9           1
 G glycine             3.7         12           1
 H histidine           2.1          7           1
 I isoleucine          5.8         19           1
 K lysine              8.0         26           2
 L leucine            14.7         48           2
 M methionine          1.5          5           1
 N asparagine          3.1         10           1
 P proline             2.4          8           2
 Q glutamine           9.5         31           3
 R arginine            4.3         14           2
 S serine              6.4         21           1
 T threonine           5.8         19           1
 V valine              5.5         18           2
 W tryptophan          0.0          0           0
 Y tyrosine            3.1         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   coiled-coil domain containing 132 isoform b 
CCDC132               0.961   coiled-coil domain containing 132 isoform a 
MYH6                  0.025   myosin heavy chain 6 
MYH7                  0.021   myosin, heavy chain 7, cardiac muscle, beta 
BUB1B                 0.021   budding uninhibited by benzimidazoles 1 beta 
MYH8                  0.020   myosin, heavy chain 8, skeletal muscle, perinatal [...
ZNF853                0.018   zinc finger protein 853 
MYH2                  0.018   myosin, heavy chain 2, skeletal muscle, adult [Homo...
MYH2                  0.018   myosin, heavy chain 2, skeletal muscle, adult [Homo...
ANKRD26               0.016   ankyrin repeat domain 26 
PCNT                  0.015   pericentrin 
CLIP1                 0.015   restin isoform b 
CLIP1                 0.015   restin isoform a 
SMC1A                 0.015   structural maintenance of chromosomes 1A 
MYH3                  0.013   myosin, heavy chain 3, skeletal muscle, embryonic [H...
MYH1                  0.013   myosin, heavy chain 1, skeletal muscle, adult [Homo...
CEP72                 0.013   centrosomal protein 72 kDa 
GOLGA4                0.013   golgi autoantigen, golgin subfamily a, 4 
ERC1                  0.013   RAB6-interacting protein 2 isoform epsilon 
PMFBP1                0.011   polyamine modulated factor 1 binding protein 1 isof...
PMFBP1                0.011   polyamine modulated factor 1 binding protein 1 isof...
CENPF                 0.011   centromere protein F 
KIF20B                0.011   M-phase phosphoprotein 1 
LMNA                  0.011   lamin A/C isoform 3 
LMNA                  0.011   lamin A/C isoform 2 
LMNA                  0.011   lamin A/C isoform 1 precursor 
ATOH1                 0.011   atonal homolog 1 
NEFM                  0.011   neurofilament, medium polypeptide 150kDa isoform 1 ...
RTF1                  0.011   Paf1/RNA polymerase II complex component 
XIRP2                 0.011   xin actin-binding repeat containing 2 isoform 1 [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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