Guide to the Human Genome
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Name: CCDC132 Sequence: fasta or formatted (964aa) NCBI GI: 62865871
Description:

coiled-coil domain containing 132 isoform a

Referenced in:

Coiled-Coil Proteins

Other entries for this name:
alt prot [327aa] coiled-coil domain containing 132 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3         51           2
 C cysteine            1.6         15           1
 D aspartate           5.4         52           2
 E glutamate           8.7         84           3
 F phenylalanine       3.7         36           2
 G glycine             3.5         34           2
 H histidine           2.2         21           1
 I isoleucine          5.2         50           2
 K lysine              7.6         73           3
 L leucine            11.9        115           3
 M methionine          2.3         22           2
 N asparagine          4.0         39           1
 P proline             3.2         31           2
 Q glutamine           6.2         60           3
 R arginine            4.9         47           2
 S serine              7.5         72           3
 T threonine           5.7         55           2
 V valine              6.2         60           2
 W tryptophan          0.8          8           1
 Y tyrosine            4.0         39           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   coiled-coil domain containing 132 isoform a 
CCDC132               0.312   coiled-coil domain containing 132 isoform b 
VPS54                 0.010   vacuolar protein sorting 54 isoform 2 
VPS54                 0.010   vacuolar protein sorting 54 isoform 1 
MYH6                  0.008   myosin heavy chain 6 
MYH7                  0.007   myosin, heavy chain 7, cardiac muscle, beta 
BUB1B                 0.007   budding uninhibited by benzimidazoles 1 beta 
MYH8                  0.006   myosin, heavy chain 8, skeletal muscle, perinatal [...
ZNF853                0.006   zinc finger protein 853 
MYH2                  0.006   myosin, heavy chain 2, skeletal muscle, adult [Homo...
MYH2                  0.006   myosin, heavy chain 2, skeletal muscle, adult [Homo...
PES1                  0.006   pescadillo homolog 1, containing BRCT domain 
CLIP1                 0.006   restin isoform b 
CLIP1                 0.006   restin isoform a 
BPTF                  0.005   bromodomain PHD finger transcription factor isoform ...
BPTF                  0.005   bromodomain PHD finger transcription factor isoform ...
ANKRD26               0.005   ankyrin repeat domain 26 
ZNF326                0.005   zinc finger protein 326 isoform 1 
FBXL21                0.005   F-box and leucine-rich repeat protein 21 
PCNT                  0.005   pericentrin 
SMC1A                 0.005   structural maintenance of chromosomes 1A 
IWS1                  0.005   IWS1 homolog 
ZBTB41                0.005   zinc finger and BTB domain containing 41 
MYH3                  0.004   myosin, heavy chain 3, skeletal muscle, embryonic [H...
MYH1                  0.004   myosin, heavy chain 1, skeletal muscle, adult [Homo...
KIAA1429              0.004   hypothetical protein LOC25962 isoform 1 
KIAA1429              0.004   hypothetical protein LOC25962 isoform 2 
CEP72                 0.004   centrosomal protein 72 kDa 
VEZT                  0.004   vezatin, adherens junctions transmembrane protein [...
GOLGA4                0.004   golgi autoantigen, golgin subfamily a, 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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