Guide to the Human Genome
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Name: NF2 Sequence: fasta or formatted (507aa) NCBI GI: 32967514
Description:

neurofibromin 2 isoform 7

Referenced in:

Cytoskeleton
Neurons

Other entries for this name:
alt prot [590aa] neurofibromin 2 isoform 2
alt prot [590aa] neurofibromin 2 isoform 2
alt prot [548aa] neurofibromin 2 isoform 5
alt prot [549aa] neurofibromin 2 isoform 6
alt mRNA [507aa] neurofibromin 2 isoform 7
alt prot [590aa] neurofibromin 2 isoform 2
alt prot [165aa] neurofibromin 2 isoform 8
alt prot [595aa] neurofibromin 2 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.5         48           2
 C cysteine            0.8          4           1
 D aspartate           4.7         24           1
 E glutamate          13.2         67           3
 F phenylalanine       2.6         13           1
 G glycine             2.6         13           2
 H histidine           1.4          7           1
 I isoleucine          5.7         29           1
 K lysine              9.9         50           2
 L leucine            10.1         51           3
 M methionine          4.3         22           1
 N asparagine          3.4         17           1
 P proline             4.1         21           2
 Q glutamine           5.3         27           2
 R arginine            7.9         40           3
 S serine              4.5         23           2
 T threonine           3.9         20           1
 V valine              3.0         15           1
 W tryptophan          0.6          3           1
 Y tyrosine            2.6         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   neurofibromin 2 isoform 7 
NF2                   1.000   neurofibromin 2 isoform 7 
NF2                   0.979   neurofibromin 2 isoform 5 
NF2                   0.978   neurofibromin 2 isoform 6 
NF2                   0.928   neurofibromin 2 isoform 2 
NF2                   0.928   neurofibromin 2 isoform 2 
NF2                   0.928   neurofibromin 2 isoform 2 
NF2                   0.905   neurofibromin 2 isoform 1 
RDX                   0.372   radixin 
EZR                   0.364   ezrin 
EZR                   0.364   ezrin 
MSN                   0.364   moesin 
PTPN13                0.092   protein tyrosine phosphatase, non-receptor type 13 i...
PTPN13                0.092   protein tyrosine phosphatase, non-receptor type 13 i...
PTPN13                0.092   protein tyrosine phosphatase, non-receptor type 13 is...
PTPN13                0.090   protein tyrosine phosphatase, non-receptor type 13 i...
PTPN4                 0.083   protein tyrosine phosphatase, non-receptor type 4 [Ho...
FRMD4B                0.080   FERM domain containing 4B 
EPB41                 0.078   erythrocyte membrane protein band 4.1 (elliptocytosi...
EPB41                 0.078   erythrocyte membrane protein band 4.1 (elliptocytosis...
PTPN3                 0.075   protein tyrosine phosphatase, non-receptor type 3 i...
PTPN3                 0.075   protein tyrosine phosphatase, non-receptor type 3 i...
PTPN3                 0.072   protein tyrosine phosphatase, non-receptor type 3 i...
PTPN3                 0.072   protein tyrosine phosphatase, non-receptor type 3 i...
EPB41                 0.072   erythrocyte membrane protein band 4.1 (elliptocytosi...
FRMD4A                0.069   FERM domain containing 4A 
EPB41L1               0.068   erythrocyte membrane protein band 4.1-like 1 isoform...
EPB41L1               0.068   erythrocyte membrane protein band 4.1-like 1 isoform...
EPB41L3               0.067   erythrocyte membrane protein band 4.1-like 3 
EPB41L2               0.066   erythrocyte membrane protein band 4.1-like 2 isofor...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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