LOC100293248 22079

Name: LOC100293248	Sequence: fasta or formatted (83aa)		NCBI GI: 239754634
Description: PREDICTED: hypothetical protein		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 3.6 3 1 C cysteine 2.4 2 1 D aspartate 4.8 4 1 E glutamate 6.0 5 1 F phenylalanine 6.0 5 1 G glycine 4.8 4 1 H histidine 0.0 0 0 I isoleucine 2.4 2 1 K lysine 1.2 1 1 L leucine 8.4 7 1 M methionine 3.6 3 2 N asparagine 1.2 1 1 P proline 7.2 6 1 Q glutamine 0.0 0 0 R arginine 8.4 7 2 S serine 32.5 27 5 T threonine 2.4 2 1 V valine 2.4 2 1 W tryptophan 1.2 1 1 Y tyrosine 1.2 1 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein LOC100290456 1.000 PREDICTED: hypothetical protein XP_002346945 LOC100289123 1.000 PREDICTED: hypothetical protein XP_002342782 LOC100289123 1.000 PREDICTED: hypothetical protein ARL6IP4 0.058 SRp25 nuclear protein isoform 4 ARL6IP4 0.058 SRp25 nuclear protein isoform 2 TNRC18 0.050 trinucleotide repeat containing 18 SRRM2 0.050 splicing coactivator subunit SRm300 CHD9 0.050 chromodomain helicase DNA binding protein 9 ZC3H12A 0.043 zinc finger CCCH-type containing 12A LOC100133142 0.043 PREDICTED: similar to zinc finger protein 208 [Homo... LOC100133142 0.043 PREDICTED: similar to zinc finger protein 208 [Homo... BRD2 0.043 bromodomain containing 2 BRD2 0.043 bromodomain containing 2 HSFY1 0.036 heat shock transcription factor, Y-linked 1 isoform ... ZBTB4 0.036 zinc finger and BTB domain containing 4 ZBTB4 0.036 zinc finger and BTB domain containing 4 HSFY2 0.036 heat shock transcription factor, Y linked 2 isoform ... ATN1 0.036 atrophin-1 ATN1 0.036 atrophin-1 KIAA1853 0.036 KIAA1853 protein ARL6IP4 0.036 SRp25 nuclear protein isoform 1 LOC100288635 0.029 PREDICTED: hypothetical protein LOC100288635 0.029 PREDICTED: hypothetical protein XP_002343184 SETD1A 0.029 SET domain containing 1A CDSN 0.029 corneodesmosin precursor MLLT3 0.029 myeloid/lymphoid or mixed-lineage leukemia (trithor... ZCCHC10 0.029 zinc finger, CCHC domain containing 10 RLIM 0.029 ring finger protein, LIM domain interacting RLIM 0.029 ring finger protein, LIM domain interacting Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.