Guide to the Human Genome
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Name: FBXL18 Sequence: fasta or formatted (718aa) NCBI GI: 157426875
Description:

F-box and leucine-rich repeat protein 18

Referenced in:

Cullins and SCF Complexes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.8         56           3
 C cysteine            3.5         25           2
 D aspartate           4.3         31           4
 E glutamate           3.8         27           2
 F phenylalanine       3.5         25           2
 G glycine             5.4         39           2
 H histidine           3.6         26           3
 I isoleucine          3.2         23           1
 K lysine              3.2         23           2
 L leucine            16.3        117           3
 M methionine          2.2         16           2
 N asparagine          3.5         25           2
 P proline             5.2         37           2
 Q glutamine           5.3         38           2
 R arginine            6.3         45           2
 S serine             11.0         79           2
 T threonine           2.9         21           1
 V valine              6.8         49           2
 W tryptophan          0.7          5           2
 Y tyrosine            1.5         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   F-box and leucine-rich repeat protein 18 
LRRC29                0.016   F-box and leucine-rich repeat protein 9 
LRRC29                0.016   F-box and leucine-rich repeat protein 9 
FBXL2                 0.010   F-box and leucine-rich repeat protein 2 
FBXL20                0.009   F-box and leucine-rich repeat protein 20 
SYNE1                 0.006   spectrin repeat containing, nuclear envelope 1 isofo...
SYNE1                 0.006   spectrin repeat containing, nuclear envelope 1 isof...
FBXL13                0.006   F-box and leucine-rich repeat protein 13 isoform 2 ...
FBXL13                0.006   F-box and leucine-rich repeat protein 13 isoform 1 ...
ANP32E                0.006   acidic (leucine-rich) nuclear phosphoprotein 32 fami...
NFKBIL2               0.006   NF-kappa-B inhibitor-like protein 2 
FBXO27                0.006   F-box protein 27 
MPDZ                  0.005   multiple PDZ domain protein 
MC4R                  0.005   melanocortin 4 receptor 
LOC348751             0.005   PREDICTED: hypothetical protein 
LOC348751             0.005   PREDICTED: hypothetical protein isoform 4 
LOC348751             0.005   PREDICTED: hypothetical protein isoform 2 
ANP32E                0.005   acidic (leucine-rich) nuclear phosphoprotein 32 fam...
TLN1                  0.004   talin 1 
THAP9                 0.004   THAP domain containing 9 
LRRC10                0.004   leucine rich repeat containing 10 
PGK1                  0.004   phosphoglycerate kinase 1 
LRRIQ1                0.004   leucine-rich repeats and IQ motif containing 1 isof...
LRRIQ1                0.004   leucine-rich repeats and IQ motif containing 1 isof...
MYT1                  0.004   myelin transcription factor 1 
FBXL15                0.004   F-box and leucine-rich repeat protein 15 
SKP2                  0.004   S-phase kinase-associated protein 2 isoform 1 
SKP2                  0.004   S-phase kinase-associated protein 2 isoform 2 
KIAA1524              0.004   p90 autoantigen 
GLTSCR1               0.004   glioma tumor suppressor candidate region gene 1 [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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