Guide to the Human Genome
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Name: ARHGEF10L Sequence: fasta or formatted (1240aa) NCBI GI: 74136547
Description:

Rho guanine nucleotide exchange factor (GEF) 10-like isoform 2

Referenced in:

Rho and Rac

Other entries for this name:
alt prot [1279aa] Rho guanine nucleotide exchange factor (GEF) 10-like isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.6         94           3
 C cysteine            2.2         27           2
 D aspartate           5.6         70           2
 E glutamate           6.9         86           3
 F phenylalanine       2.8         35           2
 G glycine             6.9         86           3
 H histidine           2.4         30           1
 I isoleucine          4.0         50           2
 K lysine              4.5         56           2
 L leucine            11.6        144           3
 M methionine          2.1         26           1
 N asparagine          2.2         27           2
 P proline             7.7         95           3
 Q glutamine           4.9         61           2
 R arginine            5.3         66           2
 S serine              8.7        108           3
 T threonine           4.5         56           2
 V valine              7.0         87           2
 W tryptophan          1.3         16           1
 Y tyrosine            1.6         20           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Rho guanine nucleotide exchange factor (GEF) 10-like... 
ARHGEF10L             0.992   Rho guanine nucleotide exchange factor (GEF) 10-like...
ARHGEF10              0.351   Rho guanine nucleotide exchange factor 10 
ARHGEF17              0.056   Rho guanine nucleotide exchange factor (GEF) 17 [Hom...
MAPK8IP3              0.035   mitogen-activated protein kinase 8 interacting prote...
MAPK8IP3              0.035   mitogen-activated protein kinase 8 interacting prote...
BCR                   0.032   breakpoint cluster region isoform 2 
BCR                   0.032   breakpoint cluster region isoform 1 
ECT2                  0.032   epithelial cell transforming sequence 2 oncogene pro...
SPAG9                 0.032   sperm associated antigen 9 isoform 1 
SPAG9                 0.032   sperm associated antigen 9 isoform 3 
ABR                   0.028   active breakpoint cluster region-related  protein i...
ABR                   0.028   active breakpoint cluster region-related  protein is...
PREX1                 0.027   phosphatidylinositol-3,4,5-trisphosphate-dependent R...
ABR                   0.027   active breakpoint cluster region-related  protein is...
FGD3                  0.025   FYVE, RhoGEF and PH domain containing 3 
FGD3                  0.025   FYVE, RhoGEF and PH domain containing 3 
ITSN1                 0.025   intersectin 1 isoform ITSN-l 
ECT2L                 0.024   epithelial cell transforming sequence 2 oncogene-li...
FGD4                  0.024   FYVE, RhoGEF and PH domain containing 4 
PLEKHG2               0.024   common-site lymphoma/leukemia guanine nucleotide ex...
FGD1                  0.024   faciogenital dysplasia protein 
FGD2                  0.022   FYVE, RhoGEF and PH domain containing 2 
TRIO                  0.022   triple functional domain (PTPRF interacting) 
FGD6                  0.022   FYVE, RhoGEF and PH domain containing 6 
ARHGEF4               0.021   Rho guanine nucleotide exchange factor 4 isoform a [...
ARHGEF4               0.021   Rho guanine nucleotide exchange factor 4 isoform b [...
RASGRF1               0.020   Ras protein-specific guanine nucleotide-releasing f...
RASGRF1               0.020   Ras protein-specific guanine nucleotide-releasing fa...
PLEKHG1               0.019   pleckstrin homology domain containing, family G (wit...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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